RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.28□□□□□ -0.92
CDKL5-202ENST00000379996 NSFL1CQ9UNZ2 370 aaKnown RBP9.28□□□□□ -0.92
CDKL5-202ENST00000379996 SOCS7O14512 581 aa9.27□□□□□ -0.92
CDKL5-202ENST00000379996 MSL1Q68DK7 614 aa9.27□□□□□ -0.92
CDKL5-202ENST00000379996 C7orf43Q8WVR3 580 aa9.27□□□□□ -0.92
CDKL5-202ENST00000379996 CELF1Q92879 486 aaKnown RBP9.27□□□□□ -0.92
CDKL5-202ENST00000379996 CNKSR1Q969H4 720 aa9.27□□□□□ -0.92
CDKL5-202ENST00000379996 RTFDC1Q9BY42 306 aaPredicted RBP9.27□□□□□ -0.92
CDKL5-202ENST00000379996 VPS33BQ9H267 617 aa9.27□□□□□ -0.92
CDKL5-202ENST00000379996 MINPP1Q9UNW1 487 aa9.27□□□□□ -0.92
CDKL5-202ENST00000379996 LEMD3Q9Y2U8 911 aa9.27□□□□□ -0.92
CDKL5-202ENST00000379996 ATP6V0A2Q9Y487 856 aa9.27□□□□□ -0.92
CDKL5-202ENST00000379996 ZNF804BA4D1E1 1349 aa9.27□□□□□ -0.93
CDKL5-202ENST00000379996 RAD50Q92878 1312 aa9.27□□□□□ -0.93
CDKL5-202ENST00000379996 KCNA3P22001 575 aa9.27□□□□□ -0.93
CDKL5-202ENST00000379996 TFCP2Q12800 502 aa9.27□□□□□ -0.93
CDKL5-202ENST00000379996 LPIN2Q92539 896 aa9.27□□□□□ -0.93
CDKL5-202ENST00000379996 ZNF594Q96JF6 807 aaPredicted RBP9.27□□□□□ -0.93
CDKL5-202ENST00000379996 PUS3Q9BZE2 481 aaKnown RBP9.27□□□□□ -0.93
CDKL5-202ENST00000379996 LSG1Q9H089 658 aaKnown RBP9.27□□□□□ -0.93
CDKL5-202ENST00000379996 FAM177BA6PVY3 158 aa9.27□□□□□ -0.93
CDKL5-202ENST00000379996 H0YIN7 160 aa9.27□□□□□ -0.93
CDKL5-202ENST00000379996 ST18O60284 1047 aa9.27□□□□□ -0.93
CDKL5-202ENST00000379996 TAF7LQ5H9L4 462 aa9.27□□□□□ -0.93
CDKL5-202ENST00000379996 KLHDC4Q8TBB5 520 aa9.27□□□□□ -0.93
CDKL5-202ENST00000379996 MPHOSPH8Q99549 860 aa9.27□□□□□ -0.93
CDKL5-202ENST00000379996 CEP126Q9P2H0 1117 aa9.27□□□□□ -0.93
CDKL5-202ENST00000379996 MYH7P12883 1935 aa9.26□□□□□ -0.93
CDKL5-202ENST00000379996 FXR2P51116 673 aaKnown RBP eCLIP9.26□□□□□ -0.93
CDKL5-202ENST00000379996 CHRNDQ07001 517 aa9.26□□□□□ -0.93
CDKL5-202ENST00000379996 TSR1Q2NL82 804 aaKnown RBP9.26□□□□□ -0.93
CDKL5-202ENST00000379996 CASC1Q6TDU7 716 aa9.26□□□□□ -0.93
CDKL5-202ENST00000379996 TMEM87AQ8NBN3 555 aa9.26□□□□□ -0.93
CDKL5-202ENST00000379996 EAF2Q96CJ1 260 aaPredicted RBP9.26□□□□□ -0.93
CDKL5-202ENST00000379996 CHAMP1Q96JM3 812 aa9.26□□□□□ -0.93
CDKL5-202ENST00000379996 CHMP3Q9Y3E7 222 aa9.26□□□□□ -0.93
CDKL5-202ENST00000379996 MED23Q9ULK4 1368 aa9.26□□□□□ -0.93
CDKL5-202ENST00000379996 XDHP47989 1333 aa9.26□□□□□ -0.93
CDKL5-202ENST00000379996 PPEF1O14829 653 aaPredicted RBP9.26□□□□□ -0.93
CDKL5-202ENST00000379996 MCM2P49736 904 aa9.26□□□□□ -0.93
CDKL5-202ENST00000379996 TMED8Q6PL24 325 aaPredicted RBP9.26□□□□□ -0.93
CDKL5-202ENST00000379996 TMEM92Q6UXU6 159 aa9.26□□□□□ -0.93
CDKL5-202ENST00000379996 C2CD5Q86YS7 1000 aa9.26□□□□□ -0.93
CDKL5-202ENST00000379996 TMEM63CQ9P1W3 806 aa9.26□□□□□ -0.93
CDKL5-202ENST00000379996 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.26□□□□□ -0.93
CDKL5-202ENST00000379996 SGSM2O43147 1006 aa9.25□□□□□ -0.93
CDKL5-202ENST00000379996 ATP5JP18859 108 aa9.25□□□□□ -0.93
CDKL5-202ENST00000379996 ARID4AP29374 1257 aaPredicted RBP9.25□□□□□ -0.93
CDKL5-202ENST00000379996 SPON1Q9HCB6 807 aa9.25□□□□□ -0.93
CDKL5-202ENST00000379996 CNNM1Q9NRU3 951 aa9.25□□□□□ -0.93
CDKL5-202ENST00000379996 ATP2B4P23634 1241 aa9.25□□□□□ -0.93
CDKL5-202ENST00000379996 SOGA3Q5TF21 947 aa9.25□□□□□ -0.93
CDKL5-202ENST00000379996 GPATCH3Q96I76 525 aa9.25□□□□□ -0.93
CDKL5-202ENST00000379996 NPHP1O15259 732 aa9.25□□□□□ -0.93
CDKL5-202ENST00000379996 CCDC173Q0VFZ6 552 aa9.25□□□□□ -0.93
CDKL5-202ENST00000379996 OS9Q13438 667 aaPredicted RBP9.25□□□□□ -0.93
CDKL5-202ENST00000379996 METTL24Q5JXM2 366 aa9.25□□□□□ -0.93
CDKL5-202ENST00000379996 MCTP1Q6DN14 999 aa9.25□□□□□ -0.93
CDKL5-202ENST00000379996 RBSNQ9H1K0 784 aa9.25□□□□□ -0.93
CDKL5-202ENST00000379996 DICER1Q9UPY3 1922 aaKnown RBP9.24□□□□□ -0.93
CDKL5-202ENST00000379996 ESPNB1AK53 854 aa9.24□□□□□ -0.93
CDKL5-202ENST00000379996 MAP2K5Q13163 448 aa9.24□□□□□ -0.93
CDKL5-202ENST00000379996 ECHDC1Q9NTX5 307 aa9.24□□□□□ -0.93
CDKL5-202ENST00000379996 DBNLQ9UJU6 430 aaKnown RBP9.24□□□□□ -0.93
CDKL5-202ENST00000379996 LTBP3Q9NS15 1303 aa9.24□□□□□ -0.93
CDKL5-202ENST00000379996 A0A1B0GUL7 405 aa9.24□□□□□ -0.93
CDKL5-202ENST00000379996 ZBTB7AO95365 584 aa9.24□□□□□ -0.93
CDKL5-202ENST00000379996 SLC5A1P13866 664 aa9.24□□□□□ -0.93
CDKL5-202ENST00000379996 OSBPP22059 807 aa9.24□□□□□ -0.93
CDKL5-202ENST00000379996 ST3GAL1Q11201 340 aa9.24□□□□□ -0.93
CDKL5-202ENST00000379996 ATP2B3Q16720 1220 aa9.24□□□□□ -0.93
CDKL5-202ENST00000379996 SIL1Q9H173 461 aa9.24□□□□□ -0.93
CDKL5-202ENST00000379996 MAP3K7O43318 606 aa9.24□□□□□ -0.93
CDKL5-202ENST00000379996 GLRX3O76003 335 aaKnown RBP9.24□□□□□ -0.93
CDKL5-202ENST00000379996 AACSQ86V21 672 aa9.24□□□□□ -0.93
CDKL5-202ENST00000379996 IFIT2P09913 472 aaKnown RBP9.23□□□□□ -0.93
CDKL5-202ENST00000379996 PSMD1Q99460 953 aa9.23□□□□□ -0.93
CDKL5-202ENST00000379996 SNX14Q9Y5W7 946 aa9.23□□□□□ -0.93
CDKL5-202ENST00000379996 FBXO33Q7Z6M2 555 aa9.23□□□□□ -0.93
CDKL5-202ENST00000379996 DDX49Q9Y6V7 483 aaKnown RBP9.23□□□□□ -0.93
CDKL5-202ENST00000379996 IFIT1P09914 478 aaKnown RBP9.22□□□□□ -0.93
CDKL5-202ENST00000379996 UQCRFS1P1P0C7P4 283 aa9.22□□□□□ -0.93
CDKL5-202ENST00000379996 PDIA4P13667 645 aaKnown RBP9.22□□□□□ -0.93
CDKL5-202ENST00000379996 HS1BP3Q53T59 392 aa9.22□□□□□ -0.93
CDKL5-202ENST00000379996 PRPF40BQ6NWY9 871 aaKnown RBP9.22□□□□□ -0.93
CDKL5-202ENST00000379996 XAGE2Q96GT9 111 aa9.22□□□□□ -0.93
CDKL5-202ENST00000379996 HAUS7Q99871 368 aa9.22□□□□□ -0.93
CDKL5-202ENST00000379996 SALL1Q9NSC2 1324 aa9.22□□□□□ -0.93
CDKL5-202ENST00000379996 NASPP49321 788 aaPredicted RBP9.22□□□□□ -0.93
CDKL5-202ENST00000379996 NEK4P51957 841 aa9.22□□□□□ -0.93
CDKL5-202ENST00000379996 LRSAM1Q6UWE0 723 aa9.22□□□□□ -0.93
CDKL5-202ENST00000379996 TTLL6Q8N841 843 aa9.22□□□□□ -0.93
CDKL5-202ENST00000379996 CCDC85AQ96PX6 553 aaPredicted RBP9.22□□□□□ -0.93
CDKL5-202ENST00000379996 IL1RAPL2Q9NP60 686 aa9.22□□□□□ -0.93
CDKL5-202ENST00000379996 GPSM2P81274 684 aa9.22□□□□□ -0.93
CDKL5-202ENST00000379996 CCDC24Q8N4L8 307 aa9.22□□□□□ -0.93
CDKL5-202ENST00000379996 SUPT20HQ8NEM7 779 aa9.22□□□□□ -0.93
CDKL5-202ENST00000379996 RBM27Q9P2N5 1060 aaKnown RBP9.22□□□□□ -0.93
CDKL5-202ENST00000379996 CCDC88AQ3V6T2 1871 aa9.22□□□□□ -0.93
CDKL5-202ENST00000379996 PSDA5PKW4 1024 aaPredicted RBP9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms