RNA–Protein interactions for RNA: ENST00000338469.3

TREM2-201, Transcript of triggering receptor expressed on myeloid cells 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM2, Length 860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2-201ENST00000338469 ECM29Q5VYK3 1845 aa14.46□□□□□ -0.09
TREM2-201ENST00000338469 USP2O75604 605 aaPredicted RBP14.46□□□□□ -0.09
TREM2-201ENST00000338469 RLBP1P12271 317 aa14.46□□□□□ -0.09
TREM2-201ENST00000338469 RASA3Q14644 834 aa14.46□□□□□ -0.09
TREM2-201ENST00000338469 C20orf194Q5TEA3 1177 aa14.46□□□□□ -0.09
TREM2-201ENST00000338469 TEPSINQ96N21 525 aa14.46□□□□□ -0.09
TREM2-201ENST00000338469 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.46□□□□□ -0.09
TREM2-201ENST00000338469 ZNF70Q9UC06 446 aaPredicted RBP14.46□□□□□ -0.09
TREM2-201ENST00000338469 GJA5P36382 358 aa14.45□□□□□ -0.1
TREM2-201ENST00000338469 RBM5P52756 815 aaKnown RBP eCLIP14.45□□□□□ -0.1
TREM2-201ENST00000338469 CHAF1AQ13111 956 aaPredicted RBP14.45□□□□□ -0.1
TREM2-201ENST00000338469 MAP3K11Q16584 847 aa14.45□□□□□ -0.1
TREM2-201ENST00000338469 SPDYE2Q495Y8 402 aa14.45□□□□□ -0.1
TREM2-201ENST00000338469 SPRYD7Q5W111 196 aa14.45□□□□□ -0.1
TREM2-201ENST00000338469 INTS3Q68E01 1043 aaKnown RBP14.45□□□□□ -0.1
TREM2-201ENST00000338469 TMEM57Q8N5G2 664 aa14.45□□□□□ -0.1
TREM2-201ENST00000338469 EYA2O00167 538 aa14.44□□□□□ -0.1
TREM2-201ENST00000338469 NF2P35240 595 aa14.44□□□□□ -0.1
TREM2-201ENST00000338469 CRKP46108 304 aa14.44□□□□□ -0.1
TREM2-201ENST00000338469 ARMC9Q7Z3E5 817 aa14.44□□□□□ -0.1
TREM2-201ENST00000338469 ITPRIPQ8IWB1 547 aa14.44□□□□□ -0.1
TREM2-201ENST00000338469 SERPINA10Q9UK55 444 aa14.44□□□□□ -0.1
TREM2-201ENST00000338469 PA2G4Q9UQ80 394 aaKnown RBP14.44□□□□□ -0.1
TREM2-201ENST00000338469 COL1A1P02452 1464 aaPredicted RBP14.44□□□□□ -0.1
TREM2-201ENST00000338469 CACNB3P54284 484 aa14.43□□□□□ -0.1
TREM2-201ENST00000338469 MVPQ14764 893 aaKnown RBP14.43□□□□□ -0.1
TREM2-201ENST00000338469 ZNF296Q8WUU4 475 aaPredicted RBP14.43□□□□□ -0.1
TREM2-201ENST00000338469 MEIS3Q99687 375 aa14.43□□□□□ -0.1
TREM2-201ENST00000338469 TMEM39BQ9GZU3 492 aa14.43□□□□□ -0.1
TREM2-201ENST00000338469 PCDH10Q9P2E7 1040 aa14.43□□□□□ -0.1
TREM2-201ENST00000338469 COG6Q9Y2V7 657 aa14.43□□□□□ -0.1
TREM2-201ENST00000338469 LRRFIP2Q9Y608 721 aaKnown RBP14.43□□□□□ -0.1
TREM2-201ENST00000338469 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.43□□□□□ -0.1
TREM2-201ENST00000338469 ARAP2Q8WZ64 1704 aa14.42□□□□□ -0.1
TREM2-201ENST00000338469 TCP10L2B9ZVM9 353 aa14.42□□□□□ -0.1
TREM2-201ENST00000338469 CNKSR2Q8WXI2 1034 aa14.42□□□□□ -0.1
TREM2-201ENST00000338469 WNK4Q96J92 1243 aa14.42□□□□□ -0.1
TREM2-201ENST00000338469 SIL1Q9H173 461 aa14.42□□□□□ -0.1
TREM2-201ENST00000338469 PPP2R3BQ9Y5P8 575 aa14.42□□□□□ -0.1
TREM2-201ENST00000338469 IGF2BP3O00425 579 aaKnown RBP eCLIP14.41□□□□□ -0.1
TREM2-201ENST00000338469 NEFLP07196 543 aa14.41□□□□□ -0.1
TREM2-201ENST00000338469 IRX6P78412 446 aaPredicted RBP14.41□□□□□ -0.1
TREM2-201ENST00000338469 PUM3Q15397 648 aaKnown RBP14.41□□□□□ -0.1
TREM2-201ENST00000338469 APOBEC3HQ6NTF7 200 aaKnown RBP14.41□□□□□ -0.1
TREM2-201ENST00000338469 REM2Q8IYK8 340 aaPredicted RBP14.41□□□□□ -0.1
TREM2-201ENST00000338469 SLC10A4Q96EP9 437 aa14.41□□□□□ -0.1
TREM2-201ENST00000338469 DDX19BQ9UMR2 479 aa14.41□□□□□ -0.1
TREM2-201ENST00000338469 TNRC18O15417 2968 aaPredicted RBP14.4□□□□□ -0.1
TREM2-201ENST00000338469 GPR25O00155 361 aa14.4□□□□□ -0.1
TREM2-201ENST00000338469 MYO1BO43795 1136 aa14.4□□□□□ -0.1
TREM2-201ENST00000338469 UBTFL1P0CB47 393 aaPredicted RBP14.4□□□□□ -0.1
TREM2-201ENST00000338469 CAP1Q01518 475 aa14.4□□□□□ -0.1
TREM2-201ENST00000338469 CAVIN4Q5BKX8 364 aa14.4□□□□□ -0.1
TREM2-201ENST00000338469 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.4□□□□□ -0.1
TREM2-201ENST00000338469 VPS37DQ86XT2 251 aa14.4□□□□□ -0.1
TREM2-201ENST00000338469 CRBNQ96SW2 442 aa14.4□□□□□ -0.1
TREM2-201ENST00000338469 PTPN18Q99952 460 aa14.4□□□□□ -0.1
TREM2-201ENST00000338469 CHMP4BQ9H444 224 aaKnown RBP14.4□□□□□ -0.1
TREM2-201ENST00000338469 OTOFQ9HC10 1997 aa14.4□□□□□ -0.1
TREM2-201ENST00000338469 PPP1R12BO60237 982 aaPredicted RBP14.39□□□□□ -0.11
TREM2-201ENST00000338469 ADORA1P30542 326 aa14.39□□□□□ -0.11
TREM2-201ENST00000338469 SOX10P56693 466 aa14.39□□□□□ -0.11
TREM2-201ENST00000338469 SUPT20HL1Q3ZLR7 823 aa14.39□□□□□ -0.11
TREM2-201ENST00000338469 CTU1Q7Z7A3 348 aaKnown RBP14.39□□□□□ -0.11
TREM2-201ENST00000338469 LPIN2Q92539 896 aa14.39□□□□□ -0.11
TREM2-201ENST00000338469 FRAT2O75474 233 aaPredicted RBP14.38□□□□□ -0.11
TREM2-201ENST00000338469 GNAI3P08754 354 aa14.38□□□□□ -0.11
TREM2-201ENST00000338469 IFIT1P09914 478 aaKnown RBP14.38□□□□□ -0.11
TREM2-201ENST00000338469 PHKA1P46020 1223 aa14.38□□□□□ -0.11
TREM2-201ENST00000338469 HDLBPQ00341 1268 aaKnown RBP14.38□□□□□ -0.11
TREM2-201ENST00000338469 IFNL1Q8IU54 200 aa14.38□□□□□ -0.11
TREM2-201ENST00000338469 ZDHHC15Q96MV8 337 aa14.38□□□□□ -0.11
TREM2-201ENST00000338469 CFHR5Q9BXR6 569 aa14.38□□□□□ -0.11
TREM2-201ENST00000338469 ELP3Q9H9T3 547 aa14.38□□□□□ -0.11
TREM2-201ENST00000338469 ZBTB7BO15156 539 aaPredicted RBP14.37□□□□□ -0.11
TREM2-201ENST00000338469 CIAO1O76071 339 aa14.37□□□□□ -0.11
TREM2-201ENST00000338469 SLC5A1P13866 664 aa14.37□□□□□ -0.11
TREM2-201ENST00000338469 DIXDC1Q155Q3 683 aa14.37□□□□□ -0.11
TREM2-201ENST00000338469 TBC1D22AQ8WUA7 517 aa14.37□□□□□ -0.11
TREM2-201ENST00000338469 MRIQ9BWK5 157 aa14.37□□□□□ -0.11
TREM2-201ENST00000338469 COPRSQ9NQ92 184 aa14.37□□□□□ -0.11
TREM2-201ENST00000338469 HTTP42858 3142 aa14.36□□□□□ -0.11
TREM2-201ENST00000338469 MANSC4A6NHS7 340 aaPredicted RBP14.36□□□□□ -0.11
TREM2-201ENST00000338469 ZBTB48P10074 688 aaPredicted RBP14.36□□□□□ -0.11
TREM2-201ENST00000338469 PRDX5P30044 214 aa14.36□□□□□ -0.11
TREM2-201ENST00000338469 TIMM10P62072 90 aa14.36□□□□□ -0.11
TREM2-201ENST00000338469 SREBF2Q12772 1141 aa14.36□□□□□ -0.11
TREM2-201ENST00000338469 ATP2B3Q16720 1220 aa14.36□□□□□ -0.11
TREM2-201ENST00000338469 EXOC6Q8TAG9 804 aa14.36□□□□□ -0.11
TREM2-201ENST00000338469 TEKT1Q969V4 418 aa14.36□□□□□ -0.11
TREM2-201ENST00000338469 MS4A4AQ96JQ5 239 aa14.36□□□□□ -0.11
TREM2-201ENST00000338469 HPS5Q9UPZ3 1129 aa14.36□□□□□ -0.11
TREM2-201ENST00000338469 HDAC5Q9UQL6 1122 aa14.36□□□□□ -0.11
TREM2-201ENST00000338469 LAMB1P07942 1786 aa14.36□□□□□ -0.11
TREM2-201ENST00000338469 PDE4DIPQ5VU43 2346 aa14.36□□□□□ -0.11
TREM2-201ENST00000338469 TESPA1A2RU30 521 aaPredicted RBP14.35□□□□□ -0.11
TREM2-201ENST00000338469 IL15P40933 162 aaPredicted RBP14.35□□□□□ -0.11
TREM2-201ENST00000338469 IREB2P48200 963 aaKnown RBP14.35□□□□□ -0.11
TREM2-201ENST00000338469 VGLL4Q14135 290 aa14.35□□□□□ -0.11
TREM2-201ENST00000338469 NOM1Q5C9Z4 860 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms