RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 TFCP2Q12800 502 aa18.15■□□□□ 0.5
SSRP1-202ENST00000293880 TTC14Q96N46 770 aa18.15■□□□□ 0.5
SSRP1-202ENST00000293880 ABCC5O15440 1437 aa18.15■□□□□ 0.5
SSRP1-202ENST00000293880 DENND4BO75064 1496 aaPredicted RBP18.15■□□□□ 0.5
SSRP1-202ENST00000293880 VWA3AA6NCI4 1184 aa18.15■□□□□ 0.5
SSRP1-202ENST00000293880 HARSP12081 509 aaKnown RBP18.15■□□□□ 0.5
SSRP1-202ENST00000293880 CCDC152Q4G0S7 254 aa18.15■□□□□ 0.5
SSRP1-202ENST00000293880 TCHPQ9BT92 498 aa18.15■□□□□ 0.5
SSRP1-202ENST00000293880 VPS16Q9H269 839 aa18.15■□□□□ 0.5
SSRP1-202ENST00000293880 INTS8Q75QN2 995 aaKnown RBP18.15■□□□□ 0.5
SSRP1-202ENST00000293880 KRT28Q7Z3Y7 464 aa18.15■□□□□ 0.5
SSRP1-202ENST00000293880 MAK16Q9BXY0 300 aaKnown RBP18.15■□□□□ 0.5
SSRP1-202ENST00000293880 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.15■□□□□ 0.5
SSRP1-202ENST00000293880 FRMD3A2A2Y4 597 aa18.15■□□□□ 0.5
SSRP1-202ENST00000293880 SETDB1Q15047 1291 aa18.15■□□□□ 0.5
SSRP1-202ENST00000293880 RUFY3Q7L099 469 aa18.15■□□□□ 0.5
SSRP1-202ENST00000293880 TRIM7Q9C029 511 aa18.15■□□□□ 0.5
SSRP1-202ENST00000293880 PPANQ9NQ55 473 aaKnown RBP18.15■□□□□ 0.5
SSRP1-202ENST00000293880 WASLO00401 505 aaPredicted RBP18.14■□□□□ 0.5
SSRP1-202ENST00000293880 NBPF6Q5VWK0 638 aa18.14■□□□□ 0.5
SSRP1-202ENST00000293880 ANKRD13DQ6ZTN6 518 aa18.14■□□□□ 0.5
SSRP1-202ENST00000293880 NBPF5PQ86XG9 351 aaPredicted RBP18.14■□□□□ 0.5
SSRP1-202ENST00000293880 NBPF4Q96M43 638 aa18.14■□□□□ 0.5
SSRP1-202ENST00000293880 A0A1B0GUA9 196 aa18.14■□□□□ 0.49
SSRP1-202ENST00000293880 HDAC1Q13547 482 aaPredicted RBP18.14■□□□□ 0.49
SSRP1-202ENST00000293880 SMC1BQ8NDV3 1235 aa18.14■□□□□ 0.49
SSRP1-202ENST00000293880 URB2Q14146 1524 aaKnown RBP18.14■□□□□ 0.49
SSRP1-202ENST00000293880 CIB2O75838 187 aa18.14■□□□□ 0.49
SSRP1-202ENST00000293880 NAA16Q6N069 864 aaPredicted RBP18.14■□□□□ 0.49
SSRP1-202ENST00000293880 RRP36Q96EU6 259 aaKnown RBP18.14■□□□□ 0.49
SSRP1-202ENST00000293880 PSMB7Q99436 277 aa18.14■□□□□ 0.49
SSRP1-202ENST00000293880 KIF14Q15058 1648 aa18.14■□□□□ 0.49
SSRP1-202ENST00000293880 UQCRFS1P1P0C7P4 283 aa18.14■□□□□ 0.49
SSRP1-202ENST00000293880 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.14■□□□□ 0.49
SSRP1-202ENST00000293880 CHMP2AO43633 222 aa18.14■□□□□ 0.49
SSRP1-202ENST00000293880 ST5P78524 1137 aa18.14■□□□□ 0.49
SSRP1-202ENST00000293880 ELF2Q15723 593 aa18.14■□□□□ 0.49
SSRP1-202ENST00000293880 RIOK3O14730 519 aaKnown RBP18.13■□□□□ 0.49
SSRP1-202ENST00000293880 ATP2A1O14983 1001 aa18.13■□□□□ 0.49
SSRP1-202ENST00000293880 STMN2Q93045 179 aa18.13■□□□□ 0.49
SSRP1-202ENST00000293880 FAM169AQ9Y6X4 670 aa18.13■□□□□ 0.49
SSRP1-202ENST00000293880 NOS1P29475 1434 aa18.13■□□□□ 0.49
SSRP1-202ENST00000293880 PRPHP41219 470 aa18.13■□□□□ 0.49
SSRP1-202ENST00000293880 HSPA2P54652 639 aa18.13■□□□□ 0.49
SSRP1-202ENST00000293880 SEL1L2Q5TEA6 688 aa18.13■□□□□ 0.49
SSRP1-202ENST00000293880 KSR1Q8IVT5 923 aa18.13■□□□□ 0.49
SSRP1-202ENST00000293880 AGTPBP1Q9UPW5 1226 aa18.13■□□□□ 0.49
SSRP1-202ENST00000293880 FANCAO15360 1455 aa18.13■□□□□ 0.49
SSRP1-202ENST00000293880 TRIM75PA6NK02 468 aa18.13■□□□□ 0.49
SSRP1-202ENST00000293880 CAVIN2O95810 425 aa18.13■□□□□ 0.49
SSRP1-202ENST00000293880 CNNM2Q9H8M5 875 aa18.13■□□□□ 0.49
SSRP1-202ENST00000293880 RRAGDQ9NQL2 400 aaPredicted RBP18.13■□□□□ 0.49
SSRP1-202ENST00000293880 AKR1B15C9JRZ8 316 aaPredicted RBP18.13■□□□□ 0.49
SSRP1-202ENST00000293880 RIMBP2O15034 1052 aa18.13■□□□□ 0.49
SSRP1-202ENST00000293880 ATP11AP98196 1134 aa18.13■□□□□ 0.49
SSRP1-202ENST00000293880 COPS6Q7L5N1 327 aa18.13■□□□□ 0.49
SSRP1-202ENST00000293880 TXNDC16Q9P2K2 825 aa18.13■□□□□ 0.49
SSRP1-202ENST00000293880 LDHCP07864 332 aa18.12■□□□□ 0.49
SSRP1-202ENST00000293880 CCDC170Q8IYT3 715 aa18.12■□□□□ 0.49
SSRP1-202ENST00000293880 EXOC5O00471 708 aa18.12■□□□□ 0.49
SSRP1-202ENST00000293880 LRRC43Q8N309 656 aa18.12■□□□□ 0.49
SSRP1-202ENST00000293880 BANK1Q8NDB2 785 aa18.12■□□□□ 0.49
SSRP1-202ENST00000293880 TSGA10Q9BZW7 698 aa18.12■□□□□ 0.49
SSRP1-202ENST00000293880 ZNF131P52739 623 aa18.12■□□□□ 0.49
SSRP1-202ENST00000293880 GEN1Q17RS7 908 aa18.12■□□□□ 0.49
SSRP1-202ENST00000293880 LMBR1LQ6UX01 489 aa18.12■□□□□ 0.49
SSRP1-202ENST00000293880 CRCPO75575 148 aa18.12■□□□□ 0.49
SSRP1-202ENST00000293880 RBM26Q5T8P6 1007 aaKnown RBP18.12■□□□□ 0.49
SSRP1-202ENST00000293880 BICDL2A1A5D9 508 aa18.12■□□□□ 0.49
SSRP1-202ENST00000293880 LACTBP83111 547 aaPredicted RBP18.12■□□□□ 0.49
SSRP1-202ENST00000293880 SWAP70Q9UH65 585 aa18.12■□□□□ 0.49
SSRP1-202ENST00000293880 PPP2R5CQ13362 524 aa18.11■□□□□ 0.49
SSRP1-202ENST00000293880 PSMD6Q15008 389 aa18.11■□□□□ 0.49
SSRP1-202ENST00000293880 CWF19L2Q2TBE0 894 aaKnown RBP18.11■□□□□ 0.49
SSRP1-202ENST00000293880 LRRC45Q96CN5 670 aa18.11■□□□□ 0.49
SSRP1-202ENST00000293880 C6orf50Q9HD87 102 aa18.11■□□□□ 0.49
SSRP1-202ENST00000293880 KRT24Q2M2I5 525 aa18.11■□□□□ 0.49
SSRP1-202ENST00000293880 GKAP1Q5VSY0 366 aaPredicted RBP18.11■□□□□ 0.49
SSRP1-202ENST00000293880 VEZTQ9HBM0 779 aa18.11■□□□□ 0.49
SSRP1-202ENST00000293880 STIM2Q9P246 746 aa18.11■□□□□ 0.49
SSRP1-202ENST00000293880 PPP2R5DQ14738 602 aa18.11■□□□□ 0.49
SSRP1-202ENST00000293880 IFNL2Q8IZJ0 200 aa18.11■□□□□ 0.49
SSRP1-202ENST00000293880 NOC4LQ9BVI4 516 aaKnown RBP18.11■□□□□ 0.49
SSRP1-202ENST00000293880 SNRPA1P09661 255 aaKnown RBP18.11■□□□□ 0.49
SSRP1-202ENST00000293880 MAEAQ7L5Y9 396 aa18.11■□□□□ 0.49
SSRP1-202ENST00000293880 SMAP1Q8IYB5 467 aaPredicted RBP18.11■□□□□ 0.49
SSRP1-202ENST00000293880 IMPG2Q9BZV3 1241 aa18.11■□□□□ 0.49
SSRP1-202ENST00000293880 PEX19P40855 299 aa18.11■□□□□ 0.49
SSRP1-202ENST00000293880 VAV2P52735 878 aa18.11■□□□□ 0.49
SSRP1-202ENST00000293880 DDX27Q96GQ7 796 aaKnown RBP18.11■□□□□ 0.49
SSRP1-202ENST00000293880 ATP6V1AP38606 617 aa18.1■□□□□ 0.49
SSRP1-202ENST00000293880 MTRF1LQ9UGC7 380 aaKnown RBP18.1■□□□□ 0.49
SSRP1-202ENST00000293880 HSPA1LP34931 641 aa18.1■□□□□ 0.49
SSRP1-202ENST00000293880 SPAG1Q07617 926 aa18.1■□□□□ 0.49
SSRP1-202ENST00000293880 KRT79Q5XKE5 535 aa18.1■□□□□ 0.49
SSRP1-202ENST00000293880 LEO1Q8WVC0 666 aaPredicted RBP18.1■□□□□ 0.49
SSRP1-202ENST00000293880 SIRT1Q96EB6 747 aa18.1■□□□□ 0.49
SSRP1-202ENST00000293880 RTL9Q8NET4 1388 aa18.1■□□□□ 0.49
SSRP1-202ENST00000293880 TNNC1P63316 161 aa18.1■□□□□ 0.49
SSRP1-202ENST00000293880 MAP3K9P80192 1104 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms