RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 ZEB1P37275 1124 aaPredicted RBP13.08□□□□□ -0.32
VPS50-201ENST00000251739 TM4SF4P48230 202 aa13.08□□□□□ -0.32
VPS50-201ENST00000251739 MLLT1Q03111 559 aaPredicted RBP13.08□□□□□ -0.32
VPS50-201ENST00000251739 NOM1Q5C9Z4 860 aaKnown RBP13.08□□□□□ -0.32
VPS50-201ENST00000251739 ZNF804AQ7Z570 1209 aa13.08□□□□□ -0.32
VPS50-201ENST00000251739 ZNF594Q96JF6 807 aaPredicted RBP13.08□□□□□ -0.32
VPS50-201ENST00000251739 CFHR5Q9BXR6 569 aa13.08□□□□□ -0.32
VPS50-201ENST00000251739 AOX1Q06278 1338 aa13.08□□□□□ -0.32
VPS50-201ENST00000251739 FAM205AQ6ZU69 1335 aa13.08□□□□□ -0.32
VPS50-201ENST00000251739 NF2P35240 595 aa13.07□□□□□ -0.32
VPS50-201ENST00000251739 PTPN12Q05209 780 aaKnown RBP13.07□□□□□ -0.32
VPS50-201ENST00000251739 MAP3K11Q16584 847 aa13.07□□□□□ -0.32
VPS50-201ENST00000251739 CTU1Q7Z7A3 348 aaKnown RBP13.07□□□□□ -0.32
VPS50-201ENST00000251739 METRNQ9UJH8 293 aa13.07□□□□□ -0.32
VPS50-201ENST00000251739 CHMP3Q9Y3E7 222 aa13.07□□□□□ -0.32
VPS50-201ENST00000251739 PCDHAC2Q9Y5I4 1007 aa13.07□□□□□ -0.32
VPS50-201ENST00000251739 MYH13Q9UKX3 1938 aa13.07□□□□□ -0.32
VPS50-201ENST00000251739 DLGAP5Q15398 846 aa13.06□□□□□ -0.32
VPS50-201ENST00000251739 CCDC57Q2TAC2 916 aa13.06□□□□□ -0.32
VPS50-201ENST00000251739 RABL6Q3YEC7 729 aaPredicted RBP13.06□□□□□ -0.32
VPS50-201ENST00000251739 LDHAL6AQ6ZMR3 332 aa13.06□□□□□ -0.32
VPS50-201ENST00000251739 SRCIN1Q9C0H9 1055 aa13.06□□□□□ -0.32
VPS50-201ENST00000251739 DEFB129Q9H1M3 183 aa13.06□□□□□ -0.32
VPS50-201ENST00000251739 PPP2R3BQ9Y5P8 575 aa13.06□□□□□ -0.32
VPS50-201ENST00000251739 GTPBP6O43824 516 aaPredicted RBP13.05□□□□□ -0.32
VPS50-201ENST00000251739 NBPF7P0C2Y1 421 aaPredicted RBP13.05□□□□□ -0.32
VPS50-201ENST00000251739 UBE4AQ14139 1066 aa13.05□□□□□ -0.32
VPS50-201ENST00000251739 TTLL12Q14166 644 aaPredicted RBP13.05□□□□□ -0.32
VPS50-201ENST00000251739 CFAP100Q494V2 611 aa13.05□□□□□ -0.32
VPS50-201ENST00000251739 SPRYD7Q5W111 196 aa13.05□□□□□ -0.32
VPS50-201ENST00000251739 ARMC9Q7Z3E5 817 aa13.05□□□□□ -0.32
VPS50-201ENST00000251739 TDRD7Q8NHU6 1098 aaKnown RBP13.05□□□□□ -0.32
VPS50-201ENST00000251739 SUCLG2Q96I99 432 aa13.05□□□□□ -0.32
VPS50-201ENST00000251739 RYDENQ9NUL5 291 aaKnown RBP13.05□□□□□ -0.32
VPS50-201ENST00000251739 C9orf78Q9NZ63 289 aaPredicted RBP13.05□□□□□ -0.32
VPS50-201ENST00000251739 POTEFA5A3E0 1075 aa13.04□□□□□ -0.32
VPS50-201ENST00000251739 FAM9BQ8IZU0 186 aa13.04□□□□□ -0.32
VPS50-201ENST00000251739 ANKRD44Q8N8A2 993 aa13.04□□□□□ -0.32
VPS50-201ENST00000251739 PDCD7Q8N8D1 485 aaKnown RBP13.04□□□□□ -0.32
VPS50-201ENST00000251739 ZNF296Q8WUU4 475 aaPredicted RBP13.04□□□□□ -0.32
VPS50-201ENST00000251739 MS4A4AQ96JQ5 239 aa13.04□□□□□ -0.32
VPS50-201ENST00000251739 PRMT6Q96LA8 375 aaPredicted RBP13.04□□□□□ -0.32
VPS50-201ENST00000251739 PUS3Q9BZE2 481 aaKnown RBP13.04□□□□□ -0.32
VPS50-201ENST00000251739 OCEL1Q9H607 264 aa13.04□□□□□ -0.32
VPS50-201ENST00000251739 CNNM1Q9NRU3 951 aa13.04□□□□□ -0.32
VPS50-201ENST00000251739 FZD1Q9UP38 647 aa13.04□□□□□ -0.32
VPS50-201ENST00000251739 RIPOR2Q9Y4F9 1068 aa13.04□□□□□ -0.32
VPS50-201ENST00000251739 RBBP6Q7Z6E9 1792 aaKnown RBP13.03□□□□□ -0.32
VPS50-201ENST00000251739 UNCXA6NJT0 531 aa13.03□□□□□ -0.32
VPS50-201ENST00000251739 TBC1D8O95759 1140 aa13.03□□□□□ -0.32
VPS50-201ENST00000251739 SREBF2Q12772 1141 aa13.03□□□□□ -0.32
VPS50-201ENST00000251739 TAF7LQ5H9L4 462 aa13.03□□□□□ -0.32
VPS50-201ENST00000251739 SLC4A10Q6U841 1118 aa13.03□□□□□ -0.32
VPS50-201ENST00000251739 MRPL50Q8N5N7 158 aaKnown RBP13.03□□□□□ -0.32
VPS50-201ENST00000251739 VGLL2Q8N8G2 317 aa13.03□□□□□ -0.32
VPS50-201ENST00000251739 FAM84BQ96KN1 310 aaPredicted RBP13.03□□□□□ -0.32
VPS50-201ENST00000251739 ANGEL1Q9UNK9 670 aaKnown RBP13.03□□□□□ -0.32
VPS50-201ENST00000251739 JAG2Q9Y219 1238 aa13.03□□□□□ -0.32
VPS50-201ENST00000251739 KIAA0100Q14667 2235 aaKnown RBP13.03□□□□□ -0.32
VPS50-201ENST00000251739 CLRN2A0PK11 232 aa13.02□□□□□ -0.33
VPS50-201ENST00000251739 F8W031 263 aaPredicted RBP13.02□□□□□ -0.33
VPS50-201ENST00000251739 GPR25O00155 361 aa13.02□□□□□ -0.33
VPS50-201ENST00000251739 ZBTB48P10074 688 aaPredicted RBP13.02□□□□□ -0.33
VPS50-201ENST00000251739 GYG1P46976 350 aa13.02□□□□□ -0.33
VPS50-201ENST00000251739 PRKG1Q13976 671 aa13.02□□□□□ -0.33
VPS50-201ENST00000251739 MFSD14BQ5SR56 506 aa13.02□□□□□ -0.33
VPS50-201ENST00000251739 SPRYD3Q8NCJ5 442 aa13.02□□□□□ -0.33
VPS50-201ENST00000251739 CLMNQ96JQ2 1002 aa13.02□□□□□ -0.33
VPS50-201ENST00000251739 R3HDMLQ9H3Y0 253 aa13.02□□□□□ -0.33
VPS50-201ENST00000251739 BICC1Q9H694 974 aaKnown RBP13.02□□□□□ -0.33
VPS50-201ENST00000251739 SERPINA10Q9UK55 444 aa13.02□□□□□ -0.33
VPS50-201ENST00000251739 COLQQ9Y215 455 aaPredicted RBP13.02□□□□□ -0.33
VPS50-201ENST00000251739 CENPFP49454 3210 aa13.01□□□□□ -0.33
VPS50-201ENST00000251739 MYO1BO43795 1136 aa13.01□□□□□ -0.33
VPS50-201ENST00000251739 PLIN1O60240 522 aa13.01□□□□□ -0.33
VPS50-201ENST00000251739 PLCG2P16885 1265 aa13.01□□□□□ -0.33
VPS50-201ENST00000251739 HIBADHP31937 336 aaKnown RBP13.01□□□□□ -0.33
VPS50-201ENST00000251739 PKN2Q16513 984 aaKnown RBP13.01□□□□□ -0.33
VPS50-201ENST00000251739 NBPF12Q5TAG4 269 aaPredicted RBP13.01□□□□□ -0.33
VPS50-201ENST00000251739 FBXO33Q7Z6M2 555 aa13.01□□□□□ -0.33
VPS50-201ENST00000251739 WNK4Q96J92 1243 aa13.01□□□□□ -0.33
VPS50-201ENST00000251739 HPS5Q9UPZ3 1129 aa13.01□□□□□ -0.33
VPS50-201ENST00000251739 PTPRCP08575 1304 aa13.01□□□□□ -0.33
VPS50-201ENST00000251739 MROH5Q6ZUA9 1318 aa13.01□□□□□ -0.33
VPS50-201ENST00000251739 MANSC4A6NHS7 340 aaPredicted RBP13□□□□□ -0.33
VPS50-201ENST00000251739 PPP1R12BO60237 982 aaPredicted RBP13□□□□□ -0.33
VPS50-201ENST00000251739 SEC24BO95487 1268 aa13□□□□□ -0.33
VPS50-201ENST00000251739 SOX10P56693 466 aa13□□□□□ -0.33
VPS50-201ENST00000251739 RASA3Q14644 834 aa13□□□□□ -0.33
VPS50-201ENST00000251739 SUPT20HL1Q3ZLR7 823 aa13□□□□□ -0.33
VPS50-201ENST00000251739 SSH1Q8WYL5 1049 aa13□□□□□ -0.33
VPS50-201ENST00000251739 TEPSINQ96N21 525 aa13□□□□□ -0.33
VPS50-201ENST00000251739 KIF16BQ96L93 1317 aa12.99□□□□□ -0.33
VPS50-201ENST00000251739 E9PSI1 815 aa12.99□□□□□ -0.33
VPS50-201ENST00000251739 IGF2BP3O00425 579 aaKnown RBP eCLIP12.99□□□□□ -0.33
VPS50-201ENST00000251739 USP2O75604 605 aaPredicted RBP12.99□□□□□ -0.33
VPS50-201ENST00000251739 SLC34A2O95436 690 aa12.99□□□□□ -0.33
VPS50-201ENST00000251739 ALDH1A1P00352 501 aa12.99□□□□□ -0.33
VPS50-201ENST00000251739 GJA5P36382 358 aa12.99□□□□□ -0.33
VPS50-201ENST00000251739 INHBEP58166 350 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 380 ms