RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 CPMP14384 443 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 GP9P14770 177 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 LEPP41159 167 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 XGP55808 180 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 RPS24P62847 133 aaKnown RBP3.68□□□□□ -1.82
SCN3A-209ENST00000639244 BVES-AS1Q5T3Y7 98 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 PMS2CLQ68D20 193 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 ZNF550Q7Z398 422 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 OR51H1Q8NH63 302 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 TMEM54Q969K7 222 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 TMEM125Q96AQ2 219 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 DNAJA3Q96EY1 480 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 ZIC5Q96T25 663 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 KCNIP2Q9NS61 270 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 PRSS50Q9UI38 385 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 E9PLN8 166 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 TAX1BP3O14907 124 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 FMODQ06828 376 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 GJC3Q8NFK1 279 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 RHNO1Q9BSD3 238 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 EDA2RQ9HAV5 297 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 LAMTOR3Q9UHA4 124 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 SPATA31D1Q6ZQQ2 1576 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 C15orf65H3BRN8 121 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 PRKNO60260 465 aaPredicted RBP3.68□□□□□ -1.82
SCN3A-209ENST00000639244 STC2O76061 302 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 GALR1P47211 349 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 KLF9Q13886 244 aaPredicted RBP3.68□□□□□ -1.82
SCN3A-209ENST00000639244 RPS27LQ71UM5 84 aaKnown RBP3.68□□□□□ -1.82
SCN3A-209ENST00000639244 SLC25A42Q86VD7 318 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 SLC37A2Q8TED4 501 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 SDR39U1Q9NRG7 319 aaPredicted RBP3.68□□□□□ -1.82
SCN3A-209ENST00000639244 KLF12Q9Y4X4 402 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 A0A0B4J2E0 115 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 A0A1B0GX12 115 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 FAM90A8PA6NJQ4 464 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 GGTLC3B5MD39 225 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 H3BUT2 72 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 MLNRO43193 412 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 FAM90A13PP0C7W8 464 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 FAM90A24PP0C7X0 464 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 TSFMP43897 325 aaKnown RBP3.68□□□□□ -1.82
SCN3A-209ENST00000639244 OR7A5Q15622 319 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 Q6AWC8 147 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 MAL2Q969L2 176 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 MCHR1Q99705 422 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 YTHDF2Q9Y5A9 579 aaKnown RBP3.68□□□□□ -1.82
SCN3A-209ENST00000639244 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 FEZF1A0PJY2 475 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 USP17L23D6RBM5 183 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 RAMP1O60894 148 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 APOC2P02655 101 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 MEF2CQ06413 473 aaPredicted RBP3.68□□□□□ -1.82
SCN3A-209ENST00000639244 OR2I1PQ8NGU4 316 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 DDIT4LQ96D03 193 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 TTTY10Q9BZA0 68 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 GP6Q9HCN6 339 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 ABRACLQ9P1F3 81 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 TMEFF2Q9UIK5 374 aaPredicted RBP3.68□□□□□ -1.82
SCN3A-209ENST00000639244 PTPRMP28827 1452 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 PKD1L3Q7Z443 1732 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 BCORQ6W2J9 1755 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 A0A087WWL8 130 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 H2BFMP0C1H6 154 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 EWSR1Q01844 656 aaKnown RBP eCLIP3.68□□□□□ -1.82
SCN3A-209ENST00000639244 IL10RBQ08334 325 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 TIGITQ495A1 244 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 Q8TCH9 128 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 VOPP1Q96AW1 172 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 RPRMQ9NS64 109 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 PXDNQ92626 1479 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 SCN7AQ01118 1682 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 SH2D1BO14796 132 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 SRIP30626 198 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 DLX1P56177 255 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 SNRPGP62308 76 aaKnown RBP3.68□□□□□ -1.82
SCN3A-209ENST00000639244 POLR2LP62875 67 aaKnown RBP3.68□□□□□ -1.82
SCN3A-209ENST00000639244 PAFAH1B3Q15102 231 aaKnown RBP3.68□□□□□ -1.82
SCN3A-209ENST00000639244 GAGE13Q4V321 117 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 LAIR2Q6ISS4 152 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 GATAD1Q8WUU5 269 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 PNRC2Q9NPJ4 139 aaKnown RBP3.68□□□□□ -1.82
SCN3A-209ENST00000639244 CXorf1O96002 111 aa3.67□□□□□ -1.82
SCN3A-209ENST00000639244 TMEM258P61165 79 aa3.67□□□□□ -1.82
SCN3A-209ENST00000639244 PPP1CBP62140 327 aa3.67□□□□□ -1.82
SCN3A-209ENST00000639244 OR1F12Q8NHA8 337 aa3.67□□□□□ -1.82
SCN3A-209ENST00000639244 LMX1AQ8TE12 382 aa3.67□□□□□ -1.82
SCN3A-209ENST00000639244 GEMIN6Q8WXD5 167 aaKnown RBP3.67□□□□□ -1.82
SCN3A-209ENST00000639244 YPEL4Q96NS1 127 aa3.67□□□□□ -1.82
SCN3A-209ENST00000639244 NAA38Q9BRA0 125 aaKnown RBP3.67□□□□□ -1.82
SCN3A-209ENST00000639244 MRPL20Q9BYC9 149 aaKnown RBP3.67□□□□□ -1.82
SCN3A-209ENST00000639244 WDR87Q6ZQQ6 2873 aa3.67□□□□□ -1.82
SCN3A-209ENST00000639244 LOC285556D6RIA3 1793 aa3.67□□□□□ -1.82
SCN3A-209ENST00000639244 FAM231BA6NCW3 169 aa3.67□□□□□ -1.82
SCN3A-209ENST00000639244 LILRA5A6NI73 299 aa3.67□□□□□ -1.82
SCN3A-209ENST00000639244 CELA2BP08218 269 aaPredicted RBP3.67□□□□□ -1.82
SCN3A-209ENST00000639244 SELPP16109 830 aa3.67□□□□□ -1.82
SCN3A-209ENST00000639244 Q6ZVH6 145 aa3.67□□□□□ -1.82
SCN3A-209ENST00000639244 FAM214BQ7L5A3 538 aa3.67□□□□□ -1.82
SCN3A-209ENST00000639244 GATD1Q8NB37 220 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms