RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 GLT8D1Q68CQ7 371 aa9.66□□□□□ -0.86
LINC00339-206ENST00000634451 CEACAM19Q7Z692 300 aa9.66□□□□□ -0.86
LINC00339-206ENST00000634451 FAM89BQ8N5H3 189 aa9.66□□□□□ -0.86
LINC00339-206ENST00000634451 RPP25LQ8N5L8 163 aaKnown RBP9.66□□□□□ -0.86
LINC00339-206ENST00000634451 BPIFB6Q8NFQ5 453 aa9.66□□□□□ -0.86
LINC00339-206ENST00000634451 DYNLRB2Q8TF09 96 aa9.66□□□□□ -0.86
LINC00339-206ENST00000634451 SRSF12Q8WXF0 261 aaKnown RBP9.66□□□□□ -0.86
LINC00339-206ENST00000634451 TMEM203Q969S6 136 aa9.66□□□□□ -0.86
LINC00339-206ENST00000634451 C2orf70A6NJV1 201 aa9.65□□□□□ -0.86
LINC00339-206ENST00000634451 LINC00473A8K010 186 aa9.65□□□□□ -0.86
LINC00339-206ENST00000634451 TRDCB7Z8K6 153 aa9.65□□□□□ -0.86
LINC00339-206ENST00000634451 SHOXO15266 292 aa9.65□□□□□ -0.86
LINC00339-206ENST00000634451 OR2J3O76001 311 aa9.65□□□□□ -0.86
LINC00339-206ENST00000634451 OR2C1O95371 312 aa9.65□□□□□ -0.86
LINC00339-206ENST00000634451 BPNT1O95861 308 aa9.65□□□□□ -0.86
LINC00339-206ENST00000634451 OR9G9P0C7N8 305 aa9.65□□□□□ -0.86
LINC00339-206ENST00000634451 GSTT2P0CG29 244 aa9.65□□□□□ -0.86
LINC00339-206ENST00000634451 GSTT2BP0CG30 244 aa9.65□□□□□ -0.86
LINC00339-206ENST00000634451 CD37P11049 281 aa9.65□□□□□ -0.86
LINC00339-206ENST00000634451 FOLR2P14207 255 aa9.65□□□□□ -0.86
LINC00339-206ENST00000634451 SRMP19623 302 aa9.65□□□□□ -0.86
LINC00339-206ENST00000634451 MAPK3P27361 379 aaPredicted RBP9.65□□□□□ -0.86
LINC00339-206ENST00000634451 PRSS8Q16651 343 aa9.65□□□□□ -0.86
LINC00339-206ENST00000634451 TMEM177Q53S58 311 aa9.65□□□□□ -0.86
LINC00339-206ENST00000634451 SETD9Q8NE22 299 aa9.65□□□□□ -0.86
LINC00339-206ENST00000634451 ACOT12Q8WYK0 555 aa9.65□□□□□ -0.86
LINC00339-206ENST00000634451 SNAPC3Q92966 411 aa9.65□□□□□ -0.86
LINC00339-206ENST00000634451 USMG5Q96IX5 58 aa9.65□□□□□ -0.86
LINC00339-206ENST00000634451 CMSS1Q9BQ75 279 aaKnown RBP9.65□□□□□ -0.86
LINC00339-206ENST00000634451 OVOL2Q9BRP0 275 aa9.65□□□□□ -0.86
LINC00339-206ENST00000634451 FKBP14Q9NWM8 211 aa9.65□□□□□ -0.86
LINC00339-206ENST00000634451 AK6Q9Y3D8 172 aaKnown RBP9.65□□□□□ -0.86
LINC00339-206ENST00000634451 PCLOQ9Y6V0 5065 aa9.65□□□□□ -0.87
LINC00339-206ENST00000634451 KIAA1109Q2LD37 5005 aa9.64□□□□□ -0.87
LINC00339-206ENST00000634451 IGKV1D-8A0A087WSZ0 117 aa9.64□□□□□ -0.87
LINC00339-206ENST00000634451 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.64□□□□□ -0.87
LINC00339-206ENST00000634451 TRBV9A0A0B4J1U6 114 aa9.64□□□□□ -0.87
LINC00339-206ENST00000634451 A0A0B4J203 849 aa9.64□□□□□ -0.87
LINC00339-206ENST00000634451 A0A1B0GW64 132 aa9.64□□□□□ -0.87
LINC00339-206ENST00000634451 HMX3A6NHT5 357 aa9.64□□□□□ -0.87
LINC00339-206ENST00000634451 J3QRK9 145 aa9.64□□□□□ -0.87
LINC00339-206ENST00000634451 FABP7O15540 132 aa9.64□□□□□ -0.87
LINC00339-206ENST00000634451 CRYZL1O95825 349 aa9.64□□□□□ -0.87
LINC00339-206ENST00000634451 RPS25P62851 125 aaKnown RBP9.64□□□□□ -0.87
LINC00339-206ENST00000634451 MED21Q13503 144 aa9.64□□□□□ -0.87
LINC00339-206ENST00000634451 HSD17B12Q53GQ0 312 aa9.64□□□□□ -0.87
LINC00339-206ENST00000634451 TMEM61Q8N0U2 210 aa9.64□□□□□ -0.87
LINC00339-206ENST00000634451 OR6M1Q8NGM8 313 aa9.64□□□□□ -0.87
LINC00339-206ENST00000634451 IL17DQ8TAD2 202 aa9.64□□□□□ -0.87
LINC00339-206ENST00000634451 DDB2Q92466 427 aa9.64□□□□□ -0.87
LINC00339-206ENST00000634451 PHYHIPQ92561 330 aa9.64□□□□□ -0.87
LINC00339-206ENST00000634451 RIMS4Q9H426 269 aaPredicted RBP9.64□□□□□ -0.87
LINC00339-206ENST00000634451 ZNF430Q9H8G1 570 aaPredicted RBP9.64□□□□□ -0.87
LINC00339-206ENST00000634451 ZC4H2Q9NQZ6 224 aa9.64□□□□□ -0.87
LINC00339-206ENST00000634451 SLC2A8Q9NY64 477 aa9.64□□□□□ -0.87
LINC00339-206ENST00000634451 PEMTQ9UBM1 199 aa9.64□□□□□ -0.87
LINC00339-206ENST00000634451 LSM2Q9Y333 95 aaKnown RBP9.64□□□□□ -0.87
LINC00339-206ENST00000634451 E7EUB6 86 aa9.63□□□□□ -0.87
LINC00339-206ENST00000634451 MPPED1O15442 326 aa9.63□□□□□ -0.87
LINC00339-206ENST00000634451 DEDDO75618 318 aa9.63□□□□□ -0.87
LINC00339-206ENST00000634451 UCHL1P09936 223 aa9.63□□□□□ -0.87
LINC00339-206ENST00000634451 SAA1P0DJI8 122 aaPredicted RBP9.63□□□□□ -0.87
LINC00339-206ENST00000634451 MYOD1P15172 320 aa9.63□□□□□ -0.87
LINC00339-206ENST00000634451 KIR2DS2P43631 304 aa9.63□□□□□ -0.87
LINC00339-206ENST00000634451 ATP5G2Q06055 141 aa9.63□□□□□ -0.87
LINC00339-206ENST00000634451 TATDN3Q17R31 274 aa9.63□□□□□ -0.87
LINC00339-206ENST00000634451 OR2B11Q5JQS5 317 aa9.63□□□□□ -0.87
LINC00339-206ENST00000634451 TMEM91Q6ZNR0 172 aa9.63□□□□□ -0.87
LINC00339-206ENST00000634451 VKORC1L1Q8N0U8 176 aa9.63□□□□□ -0.87
LINC00339-206ENST00000634451 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.63□□□□□ -0.87
LINC00339-206ENST00000634451 OR2K2Q8NGT1 345 aa9.63□□□□□ -0.87
LINC00339-206ENST00000634451 FBLIM1Q8WUP2 373 aa9.63□□□□□ -0.87
LINC00339-206ENST00000634451 CCDC140Q96MF4 163 aa9.63□□□□□ -0.87
LINC00339-206ENST00000634451 CABLES2Q9BTV7 478 aa9.63□□□□□ -0.87
LINC00339-206ENST00000634451 MLXQ9UH92 298 aa9.63□□□□□ -0.87
LINC00339-206ENST00000634451 ELF5Q9UKW6 265 aaPredicted RBP9.63□□□□□ -0.87
LINC00339-206ENST00000634451 HSF4Q9ULV5 492 aa9.63□□□□□ -0.87
LINC00339-206ENST00000634451 A0A0J9YWU9 116 aa9.62□□□□□ -0.87
LINC00339-206ENST00000634451 TMEM213A2RRL7 107 aa9.62□□□□□ -0.87
LINC00339-206ENST00000634451 CXorf65A6NEN9 183 aa9.62□□□□□ -0.87
LINC00339-206ENST00000634451 SLC17A2O00624 439 aa9.62□□□□□ -0.87
LINC00339-206ENST00000634451 SCAF4O95104 1147 aaKnown RBP9.62□□□□□ -0.87
LINC00339-206ENST00000634451 FCGR3AP08637 254 aa9.62□□□□□ -0.87
LINC00339-206ENST00000634451 DUTP33316 252 aaKnown RBP9.62□□□□□ -0.87
LINC00339-206ENST00000634451 UBE2KP61086 200 aa9.62□□□□□ -0.87
LINC00339-206ENST00000634451 C15orf32Q32M92 178 aa9.62□□□□□ -0.87
LINC00339-206ENST00000634451 LIPKQ5VXJ0 399 aa9.62□□□□□ -0.87
LINC00339-206ENST00000634451 TTC23Q5W5X9 447 aa9.62□□□□□ -0.87
LINC00339-206ENST00000634451 DHRSXQ8N5I4 330 aa9.62□□□□□ -0.87
LINC00339-206ENST00000634451 TMEM68Q96MH6 324 aa9.62□□□□□ -0.87
LINC00339-206ENST00000634451 URM1Q9BTM9 101 aaKnown RBP9.62□□□□□ -0.87
LINC00339-206ENST00000634451 ST6GALNAC5Q9BVH7 336 aa9.62□□□□□ -0.87
LINC00339-206ENST00000634451 PLGRKTQ9HBL7 147 aa9.62□□□□□ -0.87
LINC00339-206ENST00000634451 A0A075B6Q4 140 aa9.61□□□□□ -0.87
LINC00339-206ENST00000634451 TRBV6-7A0A0A0MS04 114 aa9.61□□□□□ -0.87
LINC00339-206ENST00000634451 TMEM272A0A1B0GTI8 110 aa9.61□□□□□ -0.87
LINC00339-206ENST00000634451 FAM223BA6NKX1 122 aa9.61□□□□□ -0.87
LINC00339-206ENST00000634451 TEX22C9J3V5 150 aa9.61□□□□□ -0.87
LINC00339-206ENST00000634451 NDUFB8O95169 186 aa9.61□□□□□ -0.87
LINC00339-206ENST00000634451 RPL30P62888 115 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms