RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 GNRHRP30968 328 aa13.85□□□□□ -0.19
CNOT3-208ENST00000613073 GBGT1Q8N5D6 347 aa13.85□□□□□ -0.19
CNOT3-208ENST00000613073 MRPL30Q8TCC3 161 aaKnown RBP13.85□□□□□ -0.19
CNOT3-208ENST00000613073 PKIBQ9C010 78 aa13.85□□□□□ -0.19
CNOT3-208ENST00000613073 PLSCR4Q9NRQ2 329 aa13.85□□□□□ -0.19
CNOT3-208ENST00000613073 PROCRQ9UNN8 238 aa13.85□□□□□ -0.19
CNOT3-208ENST00000613073 IGKV3-15P01624 115 aa13.85□□□□□ -0.19
CNOT3-208ENST00000613073 RAC2P15153 192 aa13.85□□□□□ -0.19
CNOT3-208ENST00000613073 FABP6P51161 128 aa13.85□□□□□ -0.19
CNOT3-208ENST00000613073 LRFN3Q9BTN0 628 aa13.85□□□□□ -0.19
CNOT3-208ENST00000613073 IGKV1D-13A0A0B4J2D9 117 aa13.84□□□□□ -0.19
CNOT3-208ENST00000613073 IFNA5P01569 189 aa13.84□□□□□ -0.19
CNOT3-208ENST00000613073 CECR9P0C854 216 aa13.84□□□□□ -0.19
CNOT3-208ENST00000613073 IGKV1-13P0DP09 117 aa13.84□□□□□ -0.19
CNOT3-208ENST00000613073 CCKARP32238 428 aa13.84□□□□□ -0.19
CNOT3-208ENST00000613073 GAGE1Q13065 139 aa13.84□□□□□ -0.19
CNOT3-208ENST00000613073 TBC1D26Q86UD7 250 aa13.84□□□□□ -0.19
CNOT3-208ENST00000613073 H1FOOQ8IZA3 346 aaPredicted RBP13.84□□□□□ -0.19
CNOT3-208ENST00000613073 OR10G4Q8NGN3 311 aa13.84□□□□□ -0.19
CNOT3-208ENST00000613073 UBALD1Q8TB05 177 aa13.84□□□□□ -0.19
CNOT3-208ENST00000613073 DNAJC4Q9NNZ3 241 aa13.84□□□□□ -0.19
CNOT3-208ENST00000613073 ATP23Q9Y6H3 246 aa13.84□□□□□ -0.19
CNOT3-208ENST00000613073 LRP5LA4QPB2 252 aa13.84□□□□□ -0.19
CNOT3-208ENST00000613073 CDS2O95674 445 aa13.84□□□□□ -0.19
CNOT3-208ENST00000613073 PDLIM4P50479 330 aa13.84□□□□□ -0.19
CNOT3-208ENST00000613073 CNN1P51911 297 aaKnown RBP13.84□□□□□ -0.19
CNOT3-208ENST00000613073 RPL23P62829 140 aaKnown RBP13.84□□□□□ -0.19
CNOT3-208ENST00000613073 TMEM241Q24JQ0 296 aa13.84□□□□□ -0.19
CNOT3-208ENST00000613073 CCDC71LQ8N9Z2 235 aa13.84□□□□□ -0.19
CNOT3-208ENST00000613073 IL1F10Q8WWZ1 152 aa13.84□□□□□ -0.19
CNOT3-208ENST00000613073 NAT8Q9UHE5 227 aa13.84□□□□□ -0.19
CNOT3-208ENST00000613073 J3QW42 95 aa13.83□□□□□ -0.19
CNOT3-208ENST00000613073 NXPH2O95156 264 aa13.83□□□□□ -0.19
CNOT3-208ENST00000613073 OR10J1P30954 320 aa13.83□□□□□ -0.19
CNOT3-208ENST00000613073 CHRNA7P36544 502 aa13.83□□□□□ -0.19
CNOT3-208ENST00000613073 ZNF818PQ6ZRF7 136 aa13.83□□□□□ -0.19
CNOT3-208ENST00000613073 ZNF826PQ6ZT77 177 aa13.83□□□□□ -0.19
CNOT3-208ENST00000613073 C11orf42Q8N5U0 333 aa13.83□□□□□ -0.19
CNOT3-208ENST00000613073 IQCF6A8MYZ5 107 aa13.83□□□□□ -0.2
CNOT3-208ENST00000613073 CEBPDP49716 269 aaPredicted RBP13.83□□□□□ -0.2
CNOT3-208ENST00000613073 ACTL10Q5JWF8 245 aa13.83□□□□□ -0.2
CNOT3-208ENST00000613073 ASCL5Q7RTU5 278 aa13.83□□□□□ -0.2
CNOT3-208ENST00000613073 GAPTQ8N292 157 aa13.83□□□□□ -0.2
CNOT3-208ENST00000613073 PYGO2Q9BRQ0 406 aa13.83□□□□□ -0.2
CNOT3-208ENST00000613073 TMEM222Q9H0R3 208 aa13.83□□□□□ -0.2
CNOT3-208ENST00000613073 ZNF71Q9NQZ8 489 aaPredicted RBP13.83□□□□□ -0.2
CNOT3-208ENST00000613073 KIR2DS1A0A191URI9 304 aa13.83□□□□□ -0.2
CNOT3-208ENST00000613073 M0QZK8 103 aa13.83□□□□□ -0.2
CNOT3-208ENST00000613073 GGCTO75223 188 aaKnown RBP13.83□□□□□ -0.2
CNOT3-208ENST00000613073 OR2H2O95918 312 aa13.83□□□□□ -0.2
CNOT3-208ENST00000613073 KIR2DS4P43632 304 aa13.83□□□□□ -0.2
CNOT3-208ENST00000613073 KIR2DS1Q14954 304 aa13.83□□□□□ -0.2
CNOT3-208ENST00000613073 ETFRF1Q6IPR1 90 aa13.83□□□□□ -0.2
CNOT3-208ENST00000613073 Q6P435 159 aa13.83□□□□□ -0.2
CNOT3-208ENST00000613073 IGFL3Q6UXB1 125 aa13.83□□□□□ -0.2
CNOT3-208ENST00000613073 Q6ZS49 121 aa13.83□□□□□ -0.2
CNOT3-208ENST00000613073 LINC00596Q86U02 117 aa13.83□□□□□ -0.2
CNOT3-208ENST00000613073 RBMXL3Q8N7X1 1067 aaKnown RBP13.83□□□□□ -0.2
CNOT3-208ENST00000613073 PLPPR1Q8TBJ4 325 aa13.83□□□□□ -0.2
CNOT3-208ENST00000613073 MSL2Q9HCI7 577 aa13.83□□□□□ -0.2
CNOT3-208ENST00000613073 ICE1Q9Y2F5 2266 aa13.82□□□□□ -0.2
CNOT3-208ENST00000613073 GRIFINA4D1Z8 144 aa13.82□□□□□ -0.2
CNOT3-208ENST00000613073 MLNRO43193 412 aa13.82□□□□□ -0.2
CNOT3-208ENST00000613073 ZNF737O75373 536 aa13.82□□□□□ -0.2
CNOT3-208ENST00000613073 CGAP01215 116 aa13.82□□□□□ -0.2
CNOT3-208ENST00000613073 Q6ZS92 163 aa13.82□□□□□ -0.2
CNOT3-208ENST00000613073 SELENOHQ8IZQ5 122 aaKnown RBP13.82□□□□□ -0.2
CNOT3-208ENST00000613073 OR2T10Q8NGZ9 312 aa13.82□□□□□ -0.2
CNOT3-208ENST00000613073 SCGB1C1Q8TD33 95 aa13.82□□□□□ -0.2
CNOT3-208ENST00000613073 RNASE8Q8TDE3 154 aaKnown RBP13.82□□□□□ -0.2
CNOT3-208ENST00000613073 GATAD1Q8WUU5 269 aa13.82□□□□□ -0.2
CNOT3-208ENST00000613073 CCL28Q9NRJ3 127 aa13.82□□□□□ -0.2
CNOT3-208ENST00000613073 DIDO1Q9BTC0 2240 aaKnown RBP13.82□□□□□ -0.2
CNOT3-208ENST00000613073 MAP1LC3B2A6NCE7 125 aa13.82□□□□□ -0.2
CNOT3-208ENST00000613073 HRASP01112 189 aa13.82□□□□□ -0.2
CNOT3-208ENST00000613073 GCH1P30793 250 aa13.82□□□□□ -0.2
CNOT3-208ENST00000613073 COTL1Q14019 142 aa13.82□□□□□ -0.2
CNOT3-208ENST00000613073 SPIN2AQ99865 258 aa13.82□□□□□ -0.2
CNOT3-208ENST00000613073 SPIN2BQ9BPZ2 258 aa13.82□□□□□ -0.2
CNOT3-208ENST00000613073 MAP1LC3BQ9GZQ8 125 aa13.82□□□□□ -0.2
CNOT3-208ENST00000613073 POLDIP2Q9Y2S7 368 aa13.82□□□□□ -0.2
CNOT3-208ENST00000613073 CACNA1DQ01668 2161 aa13.81□□□□□ -0.2
CNOT3-208ENST00000613073 WNT9BO14905 357 aa13.81□□□□□ -0.2
CNOT3-208ENST00000613073 TIMM8AO60220 97 aaPredicted RBP13.81□□□□□ -0.2
CNOT3-208ENST00000613073 IAPPP10997 89 aa13.81□□□□□ -0.2
CNOT3-208ENST00000613073 PAX9P55771 341 aa13.81□□□□□ -0.2
CNOT3-208ENST00000613073 BHLHA15Q7RTS1 189 aaPredicted RBP13.81□□□□□ -0.2
CNOT3-208ENST00000613073 C1orf162Q8NEQ5 155 aaPredicted RBP13.81□□□□□ -0.2
CNOT3-208ENST00000613073 OR6C3Q9NZP0 311 aa13.81□□□□□ -0.2
CNOT3-208ENST00000613073 IGHV1-18A0A0C4DH31 117 aa13.81□□□□□ -0.2
CNOT3-208ENST00000613073 TFF1P04155 84 aa13.81□□□□□ -0.2
CNOT3-208ENST00000613073 FAM78BQ5VT40 261 aa13.81□□□□□ -0.2
CNOT3-208ENST00000613073 PCSK4Q6UW60 755 aa13.81□□□□□ -0.2
CNOT3-208ENST00000613073 TGIF2LYQ8IUE0 185 aa13.81□□□□□ -0.2
CNOT3-208ENST00000613073 FAM215AQ9Y5M1 114 aa13.81□□□□□ -0.2
CNOT3-208ENST00000613073 BMP5P22003 454 aa13.8□□□□□ -0.2
CNOT3-208ENST00000613073 ERVK11-1P61568 191 aa13.8□□□□□ -0.2
CNOT3-208ENST00000613073 SRSF7Q16629 238 aaKnown RBP eCLIP13.8□□□□□ -0.2
CNOT3-208ENST00000613073 ACOT6Q3I5F7 207 aaPredicted RBP13.8□□□□□ -0.2
CNOT3-208ENST00000613073 PRAMEF6Q5VXH4 476 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms