RNA–Protein interactions for RNA: ENST00000594399.1

USE1-204, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-204ENST00000594399 HLA-AP01891 365 aaKnown RBP8.72□□□□□ -1.01
USE1-204ENST00000594399 OR5AC1P0C628 307 aa8.72□□□□□ -1.01
USE1-204ENST00000594399 VSIG10L2P0DP72 767 aa8.72□□□□□ -1.01
USE1-204ENST00000594399 ANXA3P12429 323 aa8.72□□□□□ -1.01
USE1-204ENST00000594399 RAB25P57735 213 aa8.72□□□□□ -1.01
USE1-204ENST00000594399 DHODHQ02127 395 aa8.72□□□□□ -1.01
USE1-204ENST00000594399 SPAG16Q8N0X2 631 aa8.72□□□□□ -1.01
USE1-204ENST00000594399 CHPT1Q8WUD6 406 aa8.72□□□□□ -1.01
USE1-204ENST00000594399 CAPSLQ8WWF8 208 aa8.72□□□□□ -1.01
USE1-204ENST00000594399 ZDHHC16Q969W1 377 aa8.72□□□□□ -1.01
USE1-204ENST00000594399 GALNT14Q96FL9 552 aa8.72□□□□□ -1.01
USE1-204ENST00000594399 TP53RKQ96S44 253 aa8.72□□□□□ -1.01
USE1-204ENST00000594399 ALX4Q9H161 411 aaPredicted RBP8.72□□□□□ -1.01
USE1-204ENST00000594399 FAM212BQ9NTI7 297 aaPredicted RBP8.72□□□□□ -1.01
USE1-204ENST00000594399 KCNIP3Q9Y2W7 256 aa8.72□□□□□ -1.01
USE1-204ENST00000594399 COL6A5A8TX70 2615 aa8.71□□□□□ -1.01
USE1-204ENST00000594399 H3BUX3 64 aa8.71□□□□□ -1.02
USE1-204ENST00000594399 RAMP3O60896 148 aa8.71□□□□□ -1.02
USE1-204ENST00000594399 SFT2D2O95562 160 aa8.71□□□□□ -1.02
USE1-204ENST00000594399 CRYZL1O95825 349 aa8.71□□□□□ -1.02
USE1-204ENST00000594399 DHFRP00374 187 aa8.71□□□□□ -1.02
USE1-204ENST00000594399 IFNA2P01563 188 aa8.71□□□□□ -1.02
USE1-204ENST00000594399 SERPINE2P07093 398 aa8.71□□□□□ -1.02
USE1-204ENST00000594399 SNRNP70P08621 437 aaKnown RBP8.71□□□□□ -1.02
USE1-204ENST00000594399 OR4E1P0C645 316 aa8.71□□□□□ -1.02
USE1-204ENST00000594399 FAM106CPP0CH98 169 aa8.71□□□□□ -1.02
USE1-204ENST00000594399 UCP1P25874 307 aa8.71□□□□□ -1.02
USE1-204ENST00000594399 SUPT4H1P63272 117 aaKnown RBP8.71□□□□□ -1.02
USE1-204ENST00000594399 SRPXP78539 464 aa8.71□□□□□ -1.02
USE1-204ENST00000594399 HES1Q14469 280 aa8.71□□□□□ -1.02
USE1-204ENST00000594399 SLC9A3R2Q15599 337 aa8.71□□□□□ -1.02
USE1-204ENST00000594399 TUSC1Q2TAM9 212 aa8.71□□□□□ -1.02
USE1-204ENST00000594399 LYG2Q86SG7 212 aa8.71□□□□□ -1.02
USE1-204ENST00000594399 SIGLECL1Q8N7X8 197 aa8.71□□□□□ -1.02
USE1-204ENST00000594399 ZNF48Q96MX3 618 aaPredicted RBP8.71□□□□□ -1.02
USE1-204ENST00000594399 SSX3Q99909 188 aa8.71□□□□□ -1.02
USE1-204ENST00000594399 PRDM13Q9H4Q3 707 aa8.71□□□□□ -1.02
USE1-204ENST00000594399 BEX1Q9HBH7 125 aa8.71□□□□□ -1.02
USE1-204ENST00000594399 C9orf170A2RU37 121 aa8.7□□□□□ -1.02
USE1-204ENST00000594399 BTBD17A6NE02 478 aa8.7□□□□□ -1.02
USE1-204ENST00000594399 FAM90A9PA6NNJ1 464 aa8.7□□□□□ -1.02
USE1-204ENST00000594399 S1PR2O95136 353 aa8.7□□□□□ -1.02
USE1-204ENST00000594399 MOSP00540 346 aa8.7□□□□□ -1.02
USE1-204ENST00000594399 IGKV1-16P04430 117 aa8.7□□□□□ -1.02
USE1-204ENST00000594399 IL5P05113 134 aa8.7□□□□□ -1.02
USE1-204ENST00000594399 RPA2P15927 270 aa8.7□□□□□ -1.02
USE1-204ENST00000594399 TMEM11P17152 192 aa8.7□□□□□ -1.02
USE1-204ENST00000594399 CD24P25063 80 aa8.7□□□□□ -1.02
USE1-204ENST00000594399 BRWD1-AS2P59051 145 aa8.7□□□□□ -1.02
USE1-204ENST00000594399 DHRS2Q13268 280 aa8.7□□□□□ -1.02
USE1-204ENST00000594399 SP6Q3SY56 376 aa8.7□□□□□ -1.02
USE1-204ENST00000594399 TMEM177Q53S58 311 aa8.7□□□□□ -1.02
USE1-204ENST00000594399 RBMS3Q6XE24 437 aaKnown RBP8.7□□□□□ -1.02
USE1-204ENST00000594399 Q6YL49 198 aa8.7□□□□□ -1.02
USE1-204ENST00000594399 PRIMA1Q86XR5 153 aa8.7□□□□□ -1.02
USE1-204ENST00000594399 THNSL2Q86YJ6 484 aa8.7□□□□□ -1.02
USE1-204ENST00000594399 OR4C13Q8NGP0 309 aa8.7□□□□□ -1.02
USE1-204ENST00000594399 OR2T10Q8NGZ9 312 aa8.7□□□□□ -1.02
USE1-204ENST00000594399 OR5R1Q8NH85 324 aa8.7□□□□□ -1.02
USE1-204ENST00000594399 CASTOR1Q8WTX7 329 aa8.7□□□□□ -1.02
USE1-204ENST00000594399 SSMEM1Q8WWF3 244 aa8.7□□□□□ -1.02
USE1-204ENST00000594399 FLYWCH2Q96CP2 140 aaKnown RBP8.7□□□□□ -1.02
USE1-204ENST00000594399 HARBI1Q96MB7 349 aa8.7□□□□□ -1.02
USE1-204ENST00000594399 SEC22CQ9BRL7 303 aa8.7□□□□□ -1.02
USE1-204ENST00000594399 TMEM222Q9H0R3 208 aa8.7□□□□□ -1.02
USE1-204ENST00000594399 GPN1Q9HCN4 374 aaPredicted RBP8.7□□□□□ -1.02
USE1-204ENST00000594399 COMMD9Q9P000 198 aa8.7□□□□□ -1.02
USE1-204ENST00000594399 PIGBOS1A0A0B4J2F0 54 aa8.69□□□□□ -1.02
USE1-204ENST00000594399 SHOXO15266 292 aa8.69□□□□□ -1.02
USE1-204ENST00000594399 DUS4LO95620 317 aaKnown RBP8.69□□□□□ -1.02
USE1-204ENST00000594399 HPRT1P00492 218 aa8.69□□□□□ -1.02
USE1-204ENST00000594399 IGHV4-59P01825 116 aa8.69□□□□□ -1.02
USE1-204ENST00000594399 FAM157CP0CG43 387 aa8.69□□□□□ -1.02
USE1-204ENST00000594399 LPAR6P43657 344 aa8.69□□□□□ -1.02
USE1-204ENST00000594399 IER3P46695 156 aa8.69□□□□□ -1.02
USE1-204ENST00000594399 EBI3Q14213 229 aa8.69□□□□□ -1.02
USE1-204ENST00000594399 TMEM187Q14656 261 aa8.69□□□□□ -1.02
USE1-204ENST00000594399 TATDN3Q17R31 274 aa8.69□□□□□ -1.02
USE1-204ENST00000594399 ZNF585BQ52M93 769 aa8.69□□□□□ -1.02
USE1-204ENST00000594399 LIAT1Q6ZQX7 453 aa8.69□□□□□ -1.02
USE1-204ENST00000594399 Q8N6K4 173 aa8.69□□□□□ -1.02
USE1-204ENST00000594399 OR52B4Q8NGK2 314 aa8.69□□□□□ -1.02
USE1-204ENST00000594399 OSR1Q8TAX0 266 aaPredicted RBP8.69□□□□□ -1.02
USE1-204ENST00000594399 ZNF431Q8TF32 576 aaPredicted RBP8.69□□□□□ -1.02
USE1-204ENST00000594399 GLYATL2Q8WU03 294 aa8.69□□□□□ -1.02
USE1-204ENST00000594399 EAF1Q96JC9 268 aaPredicted RBP8.69□□□□□ -1.02
USE1-204ENST00000594399 PLEKHA2Q9HB19 425 aa8.69□□□□□ -1.02
USE1-204ENST00000594399 PITPNC1Q9UKF7 332 aa8.69□□□□□ -1.02
USE1-204ENST00000594399 TCF19Q9Y242 345 aa8.69□□□□□ -1.02
USE1-204ENST00000594399 HOXA3O43365 443 aaPredicted RBP8.68□□□□□ -1.02
USE1-204ENST00000594399 CREBL2O60519 120 aaPredicted RBP8.68□□□□□ -1.02
USE1-204ENST00000594399 ATG12O94817 140 aa8.68□□□□□ -1.02
USE1-204ENST00000594399 SPDEFO95238 335 aa8.68□□□□□ -1.02
USE1-204ENST00000594399 HRASP01112 189 aa8.68□□□□□ -1.02
USE1-204ENST00000594399 NQO2P16083 231 aa8.68□□□□□ -1.02
USE1-204ENST00000594399 ERVK-16P61578 105 aa8.68□□□□□ -1.02
USE1-204ENST00000594399 RPS16P62249 146 aaKnown RBP8.68□□□□□ -1.02
USE1-204ENST00000594399 MMDQ15546 238 aa8.68□□□□□ -1.02
USE1-204ENST00000594399 ANKRD55Q3KP44 614 aa8.68□□□□□ -1.02
USE1-204ENST00000594399 FBLN7Q53RD9 439 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms