RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 OR4C12Q96R67 309 aa11.42□□□□□ -0.58
SMARCA4-216ENST00000591545 ACACAQ13085 2346 aa11.42□□□□□ -0.58
SMARCA4-216ENST00000591545 IGKV3D-11A0A0A0MRZ8 115 aa11.41□□□□□ -0.58
SMARCA4-216ENST00000591545 TMEM229AB2RXF0 380 aa11.41□□□□□ -0.58
SMARCA4-216ENST00000591545 RFPL3SP0C7P2 107 aa11.41□□□□□ -0.58
SMARCA4-216ENST00000591545 GLRXP35754 106 aa11.41□□□□□ -0.58
SMARCA4-216ENST00000591545 RFLNBQ8N5W9 214 aa11.41□□□□□ -0.58
SMARCA4-216ENST00000591545 RECKO95980 971 aa11.41□□□□□ -0.58
SMARCA4-216ENST00000591545 C1QCP02747 245 aa11.41□□□□□ -0.58
SMARCA4-216ENST00000591545 FAM27E3Q08E93 113 aa11.41□□□□□ -0.58
SMARCA4-216ENST00000591545 FUT5Q11128 374 aa11.41□□□□□ -0.58
SMARCA4-216ENST00000591545 RABAC1Q9UI14 185 aa11.41□□□□□ -0.58
SMARCA4-216ENST00000591545 GCM2O75603 506 aaPredicted RBP11.41□□□□□ -0.58
SMARCA4-216ENST00000591545 CD74P04233 296 aa11.41□□□□□ -0.58
SMARCA4-216ENST00000591545 PF4V1P10720 104 aa11.41□□□□□ -0.58
SMARCA4-216ENST00000591545 UCP3P55916 312 aa11.41□□□□□ -0.58
SMARCA4-216ENST00000591545 LY6DQ14210 128 aa11.41□□□□□ -0.58
SMARCA4-216ENST00000591545 IBA57Q5T440 356 aaKnown RBP11.41□□□□□ -0.58
SMARCA4-216ENST00000591545 SPANXN1Q5VSR9 72 aa11.41□□□□□ -0.58
SMARCA4-216ENST00000591545 RNASE6Q93091 150 aaKnown RBP11.41□□□□□ -0.58
SMARCA4-216ENST00000591545 HSPB9Q9BQS6 159 aa11.41□□□□□ -0.58
SMARCA4-216ENST00000591545 TRBV9A0A0B4J1U6 114 aa11.41□□□□□ -0.58
SMARCA4-216ENST00000591545 CA2P00918 260 aa11.41□□□□□ -0.58
SMARCA4-216ENST00000591545 WNT5AP41221 380 aa11.41□□□□□ -0.58
SMARCA4-216ENST00000591545 C19orf24Q9BVV8 132 aa11.41□□□□□ -0.58
SMARCA4-216ENST00000591545 PRDM14Q9GZV8 571 aa11.41□□□□□ -0.58
SMARCA4-216ENST00000591545 UQCR10Q9UDW1 63 aa11.41□□□□□ -0.58
SMARCA4-216ENST00000591545 TMEM189A5PLL7 270 aa11.4□□□□□ -0.58
SMARCA4-216ENST00000591545 NTN3O00634 580 aaPredicted RBP11.4□□□□□ -0.58
SMARCA4-216ENST00000591545 MGPP08493 103 aa11.4□□□□□ -0.58
SMARCA4-216ENST00000591545 LOXL3P58215 753 aa11.4□□□□□ -0.58
SMARCA4-216ENST00000591545 RPS20P60866 119 aaKnown RBP11.4□□□□□ -0.58
SMARCA4-216ENST00000591545 ERASQ7Z444 233 aa11.4□□□□□ -0.58
SMARCA4-216ENST00000591545 NPIPB13A6NJU9 1138 aa11.4□□□□□ -0.58
SMARCA4-216ENST00000591545 CEACAM18A8MTB9 384 aa11.4□□□□□ -0.58
SMARCA4-216ENST00000591545 NPIPB4C9JG80 1138 aa11.4□□□□□ -0.58
SMARCA4-216ENST00000591545 NDUFB4O95168 129 aa11.4□□□□□ -0.58
SMARCA4-216ENST00000591545 TRGC2P03986 189 aa11.4□□□□□ -0.58
SMARCA4-216ENST00000591545 NHLRC3Q5JS37 347 aa11.4□□□□□ -0.58
SMARCA4-216ENST00000591545 C1orf162Q8NEQ5 155 aaPredicted RBP11.4□□□□□ -0.58
SMARCA4-216ENST00000591545 LSM10Q969L4 123 aaKnown RBP11.4□□□□□ -0.58
SMARCA4-216ENST00000591545 ZSWIM8A7E2V4 1837 aa11.4□□□□□ -0.58
SMARCA4-216ENST00000591545 LIPFP07098 398 aa11.4□□□□□ -0.58
SMARCA4-216ENST00000591545 ATP5IP56385 69 aaPredicted RBP11.4□□□□□ -0.58
SMARCA4-216ENST00000591545 ZNF826PQ6ZT77 177 aa11.4□□□□□ -0.58
SMARCA4-216ENST00000591545 SMIM12Q96EX1 92 aa11.4□□□□□ -0.58
SMARCA4-216ENST00000591545 A0A1W2PPE3 182 aa11.4□□□□□ -0.58
SMARCA4-216ENST00000591545 CFDP00746 253 aaPredicted RBP11.4□□□□□ -0.58
SMARCA4-216ENST00000591545 F12P00748 615 aaPredicted RBP11.4□□□□□ -0.58
SMARCA4-216ENST00000591545 ZNF362Q5T0B9 420 aaPredicted RBP11.4□□□□□ -0.58
SMARCA4-216ENST00000591545 ELOVL1Q9BW60 279 aa11.4□□□□□ -0.58
SMARCA4-216ENST00000591545 IGLV3-12A0A075B6K2 115 aa11.39□□□□□ -0.59
SMARCA4-216ENST00000591545 M0R3E3 92 aa11.39□□□□□ -0.59
SMARCA4-216ENST00000591545 ZNF137PP52743 207 aa11.39□□□□□ -0.59
SMARCA4-216ENST00000591545 ARF6P62330 175 aa11.39□□□□□ -0.59
SMARCA4-216ENST00000591545 PCSK4Q6UW60 755 aa11.39□□□□□ -0.59
SMARCA4-216ENST00000591545 MMD2Q8IY49 270 aa11.39□□□□□ -0.59
SMARCA4-216ENST00000591545 RSG1Q9BU20 258 aa11.39□□□□□ -0.59
SMARCA4-216ENST00000591545 RBKSQ9H477 322 aa11.39□□□□□ -0.59
SMARCA4-216ENST00000591545 ZNF430Q9H8G1 570 aaPredicted RBP11.39□□□□□ -0.59
SMARCA4-216ENST00000591545 ZFC3H1O60293 1989 aaKnown RBP11.39□□□□□ -0.59
SMARCA4-216ENST00000591545 NCOR1O75376 2440 aa11.39□□□□□ -0.59
SMARCA4-216ENST00000591545 IGKV3-7A0A075B6H7 116 aa11.39□□□□□ -0.59
SMARCA4-216ENST00000591545 OR2A4O95047 310 aa11.39□□□□□ -0.59
SMARCA4-216ENST00000591545 SBF1O95248 1867 aa11.39□□□□□ -0.59
SMARCA4-216ENST00000591545 CELA3AP09093 270 aa11.39□□□□□ -0.59
SMARCA4-216ENST00000591545 BTF3P20290 206 aaKnown RBP11.39□□□□□ -0.59
SMARCA4-216ENST00000591545 PRNTQ86SH4 94 aa11.39□□□□□ -0.59
SMARCA4-216ENST00000591545 TPRX1Q8N7U7 411 aa11.39□□□□□ -0.59
SMARCA4-216ENST00000591545 OR2A7Q96R45 310 aa11.39□□□□□ -0.59
SMARCA4-216ENST00000591545 KCNE5Q9UJ90 142 aa11.39□□□□□ -0.59
SMARCA4-216ENST00000591545 PGLYRP1O75594 196 aaPredicted RBP11.39□□□□□ -0.59
SMARCA4-216ENST00000591545 IGHMP01871 453 aa11.39□□□□□ -0.59
SMARCA4-216ENST00000591545 AMY1AP04745 511 aa11.39□□□□□ -0.59
SMARCA4-216ENST00000591545 UMODP07911 640 aa11.39□□□□□ -0.59
SMARCA4-216ENST00000591545 SELENOHQ8IZQ5 122 aaKnown RBP11.39□□□□□ -0.59
SMARCA4-216ENST00000591545 HAX1O00165 279 aa11.39□□□□□ -0.59
SMARCA4-216ENST00000591545 FAM206AQ9NX38 181 aa11.39□□□□□ -0.59
SMARCA4-216ENST00000591545 DANCRP0C864 163 aa11.39□□□□□ -0.59
SMARCA4-216ENST00000591545 ZNF708P17019 499 aa11.39□□□□□ -0.59
SMARCA4-216ENST00000591545 CEBPDP49716 269 aaPredicted RBP11.39□□□□□ -0.59
SMARCA4-216ENST00000591545 ACSF3Q4G176 576 aaPredicted RBP11.39□□□□□ -0.59
SMARCA4-216ENST00000591545 ZNF318Q5VUA4 2279 aa11.38□□□□□ -0.59
SMARCA4-216ENST00000591545 OR2H2O95918 312 aa11.38□□□□□ -0.59
SMARCA4-216ENST00000591545 LINC00869P0C866 280 aa11.38□□□□□ -0.59
SMARCA4-216ENST00000591545 CDX1P47902 265 aaPredicted RBP11.38□□□□□ -0.59
SMARCA4-216ENST00000591545 TCTAP57738 103 aa11.38□□□□□ -0.59
SMARCA4-216ENST00000591545 RELBQ01201 579 aa11.38□□□□□ -0.59
SMARCA4-216ENST00000591545 FAM168AQ92567 244 aa11.38□□□□□ -0.59
SMARCA4-216ENST00000591545 LOC102723996A0A087X1L8 192 aa11.38□□□□□ -0.59
SMARCA4-216ENST00000591545 TCF21O43680 179 aa11.38□□□□□ -0.59
SMARCA4-216ENST00000591545 CD8AP01732 235 aa11.38□□□□□ -0.59
SMARCA4-216ENST00000591545 CFHR1Q03591 330 aa11.38□□□□□ -0.59
SMARCA4-216ENST00000591545 SPATA45Q537H7 98 aa11.38□□□□□ -0.59
SMARCA4-216ENST00000591545 TMEM70Q9BUB7 260 aa11.38□□□□□ -0.59
SMARCA4-216ENST00000591545 MRPS18CQ9Y3D5 142 aaKnown RBP11.38□□□□□ -0.59
SMARCA4-216ENST00000591545 FABP2P12104 132 aa11.38□□□□□ -0.59
SMARCA4-216ENST00000591545 PRSS53Q2L4Q9 553 aa11.38□□□□□ -0.59
SMARCA4-216ENST00000591545 STPG3Q8N7X2 389 aa11.38□□□□□ -0.59
SMARCA4-216ENST00000591545 GPR146Q96CH1 333 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms