RNA–Protein interactions for RNA: ENST00000587605.5

MBD1-216, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 2 BASIC

Gene MBD1, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-216ENST00000587605 MBD3L4A6NDZ8 208 aaPredicted RBP16.49■□□□□ 0.23
MBD1-216ENST00000587605 MBD3L3A6NE82 208 aaPredicted RBP16.49■□□□□ 0.23
MBD1-216ENST00000587605 MBD3L5A6NJ08 208 aaPredicted RBP16.49■□□□□ 0.23
MBD1-216ENST00000587605 PPP1R2P9O14990 202 aa16.49■□□□□ 0.23
MBD1-216ENST00000587605 ATXN7O15265 892 aaPredicted RBP16.49■□□□□ 0.23
MBD1-216ENST00000587605 YIF1AO95070 293 aa16.49■□□□□ 0.23
MBD1-216ENST00000587605 TRGC2P03986 189 aa16.49■□□□□ 0.23
MBD1-216ENST00000587605 FTH1P19P0C7X4 201 aa16.49■□□□□ 0.23
MBD1-216ENST00000587605 IGHV3-43DP0DP04 118 aa16.49■□□□□ 0.23
MBD1-216ENST00000587605 TFF3Q07654 80 aa16.49■□□□□ 0.23
MBD1-216ENST00000587605 BSXQ3C1V8 233 aa16.49■□□□□ 0.23
MBD1-216ENST00000587605 OR2Z1Q8NG97 314 aa16.49■□□□□ 0.23
MBD1-216ENST00000587605 MBD3L2Q8NHZ7 208 aaPredicted RBP16.49■□□□□ 0.23
MBD1-216ENST00000587605 RFESDQ8TAC1 157 aa16.49■□□□□ 0.23
MBD1-216ENST00000587605 GNG12Q9UBI6 72 aa16.49■□□□□ 0.23
MBD1-216ENST00000587605 GAB2Q9UQC2 676 aa16.49■□□□□ 0.23
MBD1-216ENST00000587605 WDR83OSQ9Y284 106 aa16.49■□□□□ 0.23
MBD1-216ENST00000587605 FREM2Q5SZK8 3169 aa16.49■□□□□ 0.23
MBD1-216ENST00000587605 C15orf62A8K5M9 175 aa16.49■□□□□ 0.23
MBD1-216ENST00000587605 F2RL2O00254 374 aa16.49■□□□□ 0.23
MBD1-216ENST00000587605 ERVK-16P61578 105 aa16.49■□□□□ 0.23
MBD1-216ENST00000587605 EDDM3AQ14507 147 aa16.49■□□□□ 0.23
MBD1-216ENST00000587605 ADIRFQ15847 76 aa16.49■□□□□ 0.23
MBD1-216ENST00000587605 MORN2Q502X0 79 aa16.49■□□□□ 0.23
MBD1-216ENST00000587605 TPRX1Q8N7U7 411 aa16.49■□□□□ 0.23
MBD1-216ENST00000587605 RAB1CQ92928 201 aa16.49■□□□□ 0.23
MBD1-216ENST00000587605 RAB24Q969Q5 203 aa16.49■□□□□ 0.23
MBD1-216ENST00000587605 OR6C3Q9NZP0 311 aa16.49■□□□□ 0.23
MBD1-216ENST00000587605 MIOXQ9UGB7 285 aa16.49■□□□□ 0.23
MBD1-216ENST00000587605 VENTXO95231 258 aa16.48■□□□□ 0.23
MBD1-216ENST00000587605 DNLZQ5SXM8 178 aa16.48■□□□□ 0.23
MBD1-216ENST00000587605 TGIF2LYQ8IUE0 185 aa16.48■□□□□ 0.23
MBD1-216ENST00000587605 OR4A16Q8NH70 328 aa16.48■□□□□ 0.23
MBD1-216ENST00000587605 ANAPC16Q96DE5 110 aa16.48■□□□□ 0.23
MBD1-216ENST00000587605 NEIL1Q96FI4 390 aaPredicted RBP16.48■□□□□ 0.23
MBD1-216ENST00000587605 PYGO2Q9BRQ0 406 aa16.48■□□□□ 0.23
MBD1-216ENST00000587605 QTRT1Q9BXR0 403 aaKnown RBP16.48■□□□□ 0.23
MBD1-216ENST00000587605 OPN3Q9H1Y3 402 aaPredicted RBP16.48■□□□□ 0.23
MBD1-216ENST00000587605 GTF3C1Q12789 2109 aa16.48■□□□□ 0.23
MBD1-216ENST00000587605 CHD3Q12873 2000 aaKnown RBP16.47■□□□□ 0.23
MBD1-216ENST00000587605 IGKV1D-17A0A075B6S4 117 aa16.47■□□□□ 0.23
MBD1-216ENST00000587605 CEACAM4O75871 244 aa16.47■□□□□ 0.23
MBD1-216ENST00000587605 TFF1P04155 84 aa16.47■□□□□ 0.23
MBD1-216ENST00000587605 CDC34P49427 236 aaPredicted RBP16.47■□□□□ 0.23
MBD1-216ENST00000587605 PRAMEF5Q5TYX0 476 aa16.47■□□□□ 0.23
MBD1-216ENST00000587605 OR10A7Q8NGE5 316 aa16.47■□□□□ 0.23
MBD1-216ENST00000587605 S100PBPQ96BU1 408 aa16.47■□□□□ 0.23
MBD1-216ENST00000587605 SRD5A3Q9H8P0 318 aa16.47■□□□□ 0.23
MBD1-216ENST00000587605 DKK4Q9UBT3 224 aa16.47■□□□□ 0.23
MBD1-216ENST00000587605 PTPRBP23467 1997 aa16.47■□□□□ 0.23
MBD1-216ENST00000587605 USF3Q68DE3 2245 aa16.47■□□□□ 0.23
MBD1-216ENST00000587605 NCOR1O75376 2440 aa16.47■□□□□ 0.23
MBD1-216ENST00000587605 DEFB108AA8MXU0 73 aa16.47■□□□□ 0.23
MBD1-216ENST00000587605 IGHV3-13P01766 116 aa16.47■□□□□ 0.23
MBD1-216ENST00000587605 CD1BP29016 333 aa16.47■□□□□ 0.23
MBD1-216ENST00000587605 RAB7AP51149 207 aa16.47■□□□□ 0.23
MBD1-216ENST00000587605 OR4F5Q8NH21 305 aa16.47■□□□□ 0.23
MBD1-216ENST00000587605 OR5B12Q96R08 314 aa16.47■□□□□ 0.23
MBD1-216ENST00000587605 OR4F4Q96R69 305 aa16.47■□□□□ 0.23
MBD1-216ENST00000587605 PARLQ9H300 379 aa16.47■□□□□ 0.23
MBD1-216ENST00000587605 IFITM10A6NMD0 228 aa16.46■□□□□ 0.23
MBD1-216ENST00000587605 FCGR3BO75015 233 aa16.46■□□□□ 0.23
MBD1-216ENST00000587605 OR9G9P0C7N8 305 aa16.46■□□□□ 0.23
MBD1-216ENST00000587605 TRGC1P0CF51 173 aa16.46■□□□□ 0.23
MBD1-216ENST00000587605 EGR1P18146 543 aa16.46■□□□□ 0.23
MBD1-216ENST00000587605 RPL23P62829 140 aaKnown RBP16.46■□□□□ 0.23
MBD1-216ENST00000587605 TIMM23BQ5SRD1 257 aa16.46■□□□□ 0.23
MBD1-216ENST00000587605 GCSAMQ8N6F7 178 aa16.46■□□□□ 0.23
MBD1-216ENST00000587605 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.46■□□□□ 0.23
MBD1-216ENST00000587605 KCNIP2Q9NS61 270 aa16.46■□□□□ 0.23
MBD1-216ENST00000587605 H7BYZ3 331 aa16.45■□□□□ 0.22
MBD1-216ENST00000587605 M0R1X1 148 aa16.45■□□□□ 0.22
MBD1-216ENST00000587605 PFN1P07737 140 aaKnown RBP16.45■□□□□ 0.22
MBD1-216ENST00000587605 SPNS3Q6ZMD2 512 aa16.45■□□□□ 0.22
MBD1-216ENST00000587605 C16orf82Q7Z2V1 217 aa16.45■□□□□ 0.22
MBD1-216ENST00000587605 HIST3H2BBQ8N257 126 aa16.45■□□□□ 0.22
MBD1-216ENST00000587605 ZADH2Q8N4Q0 377 aa16.45■□□□□ 0.22
MBD1-216ENST00000587605 DEFB124Q8NES8 71 aa16.45■□□□□ 0.22
MBD1-216ENST00000587605 RPUSD4Q96CM3 377 aaKnown RBP16.45■□□□□ 0.22
MBD1-216ENST00000587605 TXNDC17Q9BRA2 123 aa16.45■□□□□ 0.22
MBD1-216ENST00000587605 DMRT1Q9Y5R6 373 aa16.45■□□□□ 0.22
MBD1-216ENST00000587605 LINC00587B1AMM8 73 aa16.45■□□□□ 0.22
MBD1-216ENST00000587605 PDE6DO43924 150 aa16.45■□□□□ 0.22
MBD1-216ENST00000587605 TMPRSS3P57727 454 aa16.45■□□□□ 0.22
MBD1-216ENST00000587605 HOXA4Q00056 320 aaPredicted RBP16.45■□□□□ 0.22
MBD1-216ENST00000587605 SRSF6Q13247 344 aaKnown RBP16.45■□□□□ 0.22
MBD1-216ENST00000587605 FRZBQ92765 325 aa16.45■□□□□ 0.22
MBD1-216ENST00000587605 MEGF10Q96KG7 1140 aa16.45■□□□□ 0.22
MBD1-216ENST00000587605 S1PR3Q99500 378 aa16.45■□□□□ 0.22
MBD1-216ENST00000587605 DCTN5Q9BTE1 182 aa16.45■□□□□ 0.22
MBD1-216ENST00000587605 DUSP13Q9UII6 198 aa16.45■□□□□ 0.22
MBD1-216ENST00000587605 PHOX2AO14813 284 aa16.44■□□□□ 0.22
MBD1-216ENST00000587605 GLRXP35754 106 aa16.44■□□□□ 0.22
MBD1-216ENST00000587605 OPRK1P41145 380 aa16.44■□□□□ 0.22
MBD1-216ENST00000587605 KLF3P57682 345 aaPredicted RBP16.44■□□□□ 0.22
MBD1-216ENST00000587605 LOXL3P58215 753 aa16.44■□□□□ 0.22
MBD1-216ENST00000587605 ABHD5Q8WTS1 349 aa16.44■□□□□ 0.22
MBD1-216ENST00000587605 PITPNC1Q9UKF7 332 aa16.44■□□□□ 0.22
MBD1-216ENST00000587605 TRGV8A0A0C4DH27 118 aa16.43■□□□□ 0.22
MBD1-216ENST00000587605 IGHV2-70P01814 119 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms