RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 ODF3BA8MYP8 253 aa11.3□□□□□ -0.6
CSNK1D-209ENST00000578904 FAM25EA8MYX2 175 aa11.3□□□□□ -0.6
CSNK1D-209ENST00000578904 FCGR3BO75015 233 aa11.3□□□□□ -0.6
CSNK1D-209ENST00000578904 HRASP01112 189 aa11.3□□□□□ -0.6
CSNK1D-209ENST00000578904 HOXB5P09067 269 aa11.3□□□□□ -0.6
CSNK1D-209ENST00000578904 GIPP09681 153 aaPredicted RBP11.3□□□□□ -0.6
CSNK1D-209ENST00000578904 LPAR6P43657 344 aa11.3□□□□□ -0.6
CSNK1D-209ENST00000578904 AKR1C2P52895 323 aa11.3□□□□□ -0.6
CSNK1D-209ENST00000578904 BPIFB3P59826 476 aa11.3□□□□□ -0.6
CSNK1D-209ENST00000578904 RAP2BP61225 183 aa11.3□□□□□ -0.6
CSNK1D-209ENST00000578904 CD83Q01151 205 aa11.3□□□□□ -0.6
CSNK1D-209ENST00000578904 FGL1Q08830 312 aa11.3□□□□□ -0.6
CSNK1D-209ENST00000578904 ZNF816Q0VGE8 651 aaPredicted RBP11.3□□□□□ -0.6
CSNK1D-209ENST00000578904 FAM120AOSQ5T036 256 aa11.3□□□□□ -0.6
CSNK1D-209ENST00000578904 IL17RELQ6ZVW7 336 aa11.3□□□□□ -0.6
CSNK1D-209ENST00000578904 PDPNQ86YL7 162 aa11.3□□□□□ -0.6
CSNK1D-209ENST00000578904 SELENOHQ8IZQ5 122 aaKnown RBP11.3□□□□□ -0.6
CSNK1D-209ENST00000578904 OR4P4Q8NGL7 312 aa11.3□□□□□ -0.6
CSNK1D-209ENST00000578904 LSM10Q969L4 123 aaKnown RBP11.3□□□□□ -0.6
CSNK1D-209ENST00000578904 ST6GALNAC6Q969X2 333 aa11.3□□□□□ -0.6
CSNK1D-209ENST00000578904 MALSU1Q96EH3 234 aa11.3□□□□□ -0.6
CSNK1D-209ENST00000578904 ZNF251Q9BRH9 671 aa11.3□□□□□ -0.6
CSNK1D-209ENST00000578904 SLC35D1Q9NTN3 355 aa11.3□□□□□ -0.6
CSNK1D-209ENST00000578904 TMEM160Q9NX00 188 aa11.3□□□□□ -0.6
CSNK1D-209ENST00000578904 CACFD1Q9UGQ2 172 aa11.3□□□□□ -0.6
CSNK1D-209ENST00000578904 TRAV40A0A0B4J280 105 aa11.29□□□□□ -0.6
CSNK1D-209ENST00000578904 C13orf42A0A1B0GVH6 325 aa11.29□□□□□ -0.6
CSNK1D-209ENST00000578904 LINC00473A8K010 186 aa11.29□□□□□ -0.6
CSNK1D-209ENST00000578904 RNASEK-C17orf49H0YIS7 233 aa11.29□□□□□ -0.6
CSNK1D-209ENST00000578904 H7C2Y5 167 aa11.29□□□□□ -0.6
CSNK1D-209ENST00000578904 AVPP01185 164 aa11.29□□□□□ -0.6
CSNK1D-209ENST00000578904 CT45A6P0DMU7 189 aa11.29□□□□□ -0.6
CSNK1D-209ENST00000578904 CT45A5P0DMU8 189 aa11.29□□□□□ -0.6
CSNK1D-209ENST00000578904 CT45A7P0DMV0 189 aa11.29□□□□□ -0.6
CSNK1D-209ENST00000578904 DLX1P56177 255 aa11.29□□□□□ -0.6
CSNK1D-209ENST00000578904 RPL30P62888 115 aaKnown RBP11.29□□□□□ -0.6
CSNK1D-209ENST00000578904 PRB3Q04118 309 aaPredicted RBP11.29□□□□□ -0.6
CSNK1D-209ENST00000578904 TPTE2P1Q5T6R2 138 aa11.29□□□□□ -0.6
CSNK1D-209ENST00000578904 C1orf229Q6ZS94 237 aaPredicted RBP11.29□□□□□ -0.6
CSNK1D-209ENST00000578904 SLC35G3Q8N808 338 aa11.29□□□□□ -0.6
CSNK1D-209ENST00000578904 DRAXINQ8NBI3 349 aaPredicted RBP11.29□□□□□ -0.6
CSNK1D-209ENST00000578904 OR11H7Q8NGC8 314 aa11.29□□□□□ -0.6
CSNK1D-209ENST00000578904 OSR1Q8TAX0 266 aaPredicted RBP11.29□□□□□ -0.6
CSNK1D-209ENST00000578904 C2orf50Q96LR7 162 aa11.29□□□□□ -0.6
CSNK1D-209ENST00000578904 GPHA2Q96T91 129 aa11.29□□□□□ -0.6
CSNK1D-209ENST00000578904 WASHC3Q9Y3C0 194 aa11.29□□□□□ -0.6
CSNK1D-209ENST00000578904 HIVEP2P31629 2446 aa11.28□□□□□ -0.6
CSNK1D-209ENST00000578904 INAFM1C9JVW0 142 aa11.28□□□□□ -0.6
CSNK1D-209ENST00000578904 PROP1O75360 226 aa11.28□□□□□ -0.6
CSNK1D-209ENST00000578904 SNAPC5O75971 98 aa11.28□□□□□ -0.6
CSNK1D-209ENST00000578904 OR2A4O95047 310 aa11.28□□□□□ -0.6
CSNK1D-209ENST00000578904 PET100P0DJ07 73 aa11.28□□□□□ -0.6
CSNK1D-209ENST00000578904 SLC25A6P12236 298 aa11.28□□□□□ -0.6
CSNK1D-209ENST00000578904 NQO2P16083 231 aa11.28□□□□□ -0.6
CSNK1D-209ENST00000578904 SRP14P37108 136 aaKnown RBP11.28□□□□□ -0.6
CSNK1D-209ENST00000578904 KLRD1Q13241 179 aa11.28□□□□□ -0.6
CSNK1D-209ENST00000578904 OR2B11Q5JQS5 317 aa11.28□□□□□ -0.6
CSNK1D-209ENST00000578904 UTF1Q5T230 341 aa11.28□□□□□ -0.6
CSNK1D-209ENST00000578904 GGNBP1Q5YKI7 109 aa11.28□□□□□ -0.6
CSNK1D-209ENST00000578904 H2BFWTQ7Z2G1 175 aa11.28□□□□□ -0.6
CSNK1D-209ENST00000578904 MOB3BQ86TA1 216 aa11.28□□□□□ -0.6
CSNK1D-209ENST00000578904 TCTE3Q8IZS6 198 aa11.28□□□□□ -0.6
CSNK1D-209ENST00000578904 OR5AN1Q8NGI8 311 aa11.28□□□□□ -0.6
CSNK1D-209ENST00000578904 OR4C13Q8NGP0 309 aa11.28□□□□□ -0.6
CSNK1D-209ENST00000578904 NANPQ8TBE9 248 aa11.28□□□□□ -0.6
CSNK1D-209ENST00000578904 DDB2Q92466 427 aa11.28□□□□□ -0.6
CSNK1D-209ENST00000578904 FLYWCH2Q96CP2 140 aaKnown RBP11.28□□□□□ -0.6
CSNK1D-209ENST00000578904 C5orf30Q96GV9 206 aa11.28□□□□□ -0.6
CSNK1D-209ENST00000578904 OR2A7Q96R45 310 aa11.28□□□□□ -0.6
CSNK1D-209ENST00000578904 NABP2Q9BQ15 211 aa11.28□□□□□ -0.6
CSNK1D-209ENST00000578904 MRPL20Q9BYC9 149 aaKnown RBP11.28□□□□□ -0.6
CSNK1D-209ENST00000578904 NMES1Q9C002 83 aa11.28□□□□□ -0.6
CSNK1D-209ENST00000578904 ANK3Q12955 4377 aaKnown RBP11.28□□□□□ -0.6
CSNK1D-209ENST00000578904 IGHV3OR16-10A0A075B7F0 116 aa11.27□□□□□ -0.61
CSNK1D-209ENST00000578904 IGHV1-3A0A0C4DH29 117 aa11.27□□□□□ -0.61
CSNK1D-209ENST00000578904 A0A1B0GU03 582 aa11.27□□□□□ -0.61
CSNK1D-209ENST00000578904 LY6LH3BQJ8 138 aa11.27□□□□□ -0.61
CSNK1D-209ENST00000578904 NPFFO15130 113 aa11.27□□□□□ -0.61
CSNK1D-209ENST00000578904 CRYZL1O95825 349 aa11.27□□□□□ -0.61
CSNK1D-209ENST00000578904 CXCL3P19876 107 aa11.27□□□□□ -0.61
CSNK1D-209ENST00000578904 BRS3P32247 399 aa11.27□□□□□ -0.61
CSNK1D-209ENST00000578904 IAH1Q2TAA2 248 aaPredicted RBP11.27□□□□□ -0.61
CSNK1D-209ENST00000578904 ZNF585BQ52M93 769 aa11.27□□□□□ -0.61
CSNK1D-209ENST00000578904 HCP5Q6MZN7 132 aa11.27□□□□□ -0.61
CSNK1D-209ENST00000578904 LYZL2Q7Z4W2 148 aa11.27□□□□□ -0.61
CSNK1D-209ENST00000578904 PDZD9Q8IXQ8 264 aa11.27□□□□□ -0.61
CSNK1D-209ENST00000578904 ZNF383Q8NA42 475 aa11.27□□□□□ -0.61
CSNK1D-209ENST00000578904 DMBX1Q8NFW5 382 aa11.27□□□□□ -0.61
CSNK1D-209ENST00000578904 RNF5Q99942 180 aa11.27□□□□□ -0.61
CSNK1D-209ENST00000578904 NEURL2Q9BR09 285 aa11.27□□□□□ -0.61
CSNK1D-209ENST00000578904 CHIAQ9BZP6 476 aa11.27□□□□□ -0.61
CSNK1D-209ENST00000578904 RANBP3Q9H6Z4 567 aaPredicted RBP11.27□□□□□ -0.61
CSNK1D-209ENST00000578904 PRR13Q9NZ81 148 aa11.27□□□□□ -0.61
CSNK1D-209ENST00000578904 ZNRD1Q9P1U0 126 aa11.27□□□□□ -0.61
CSNK1D-209ENST00000578904 CDC42EP3Q9UKI2 254 aa11.27□□□□□ -0.61
CSNK1D-209ENST00000578904 MMP24Q9Y5R2 645 aa11.27□□□□□ -0.61
CSNK1D-209ENST00000578904 SONP18583 2426 aaKnown RBP11.26□□□□□ -0.61
CSNK1D-209ENST00000578904 IGHV1-69DA0A0B4J2H0 117 aa11.26□□□□□ -0.61
CSNK1D-209ENST00000578904 CENPVL3A0A0U1RRI6 287 aa11.26□□□□□ -0.61
CSNK1D-209ENST00000578904 FAM90A9PA6NNJ1 464 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms