RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 AHSA2Q719I0 299 aa8.74□□□□□ -1.01
NSMCE1-202ENST00000561960 CEACAM19Q7Z692 300 aa8.74□□□□□ -1.01
NSMCE1-202ENST00000561960 VKORC1L1Q8N0U8 176 aa8.74□□□□□ -1.01
NSMCE1-202ENST00000561960 NKAIN3Q8N8D7 197 aa8.74□□□□□ -1.01
NSMCE1-202ENST00000561960 EDARADDQ8WWZ3 215 aa8.74□□□□□ -1.01
NSMCE1-202ENST00000561960 SRSF12Q8WXF0 261 aaKnown RBP8.74□□□□□ -1.01
NSMCE1-202ENST00000561960 RNF5Q99942 180 aa8.74□□□□□ -1.01
NSMCE1-202ENST00000561960 UQCC2Q9BRT2 126 aa8.74□□□□□ -1.01
NSMCE1-202ENST00000561960 LPAR5Q9H1C0 372 aa8.74□□□□□ -1.01
NSMCE1-202ENST00000561960 Q9N2K0 584 aa8.74□□□□□ -1.01
NSMCE1-202ENST00000561960 LRRC42Q9Y546 428 aa8.74□□□□□ -1.01
NSMCE1-202ENST00000561960 DNAH2Q9P225 4427 aa8.74□□□□□ -1.01
NSMCE1-202ENST00000561960 FAT2Q9NYQ8 4349 aa8.73□□□□□ -1.01
NSMCE1-202ENST00000561960 A0A075B6Q4 140 aa8.73□□□□□ -1.01
NSMCE1-202ENST00000561960 REG1AP05451 166 aa8.73□□□□□ -1.01
NSMCE1-202ENST00000561960 MYOD1P15172 320 aa8.73□□□□□ -1.01
NSMCE1-202ENST00000561960 RASSF2P50749 326 aa8.73□□□□□ -1.01
NSMCE1-202ENST00000561960 QRFPP83859 136 aa8.73□□□□□ -1.01
NSMCE1-202ENST00000561960 C15orf32Q32M92 178 aa8.73□□□□□ -1.01
NSMCE1-202ENST00000561960 MOGAT2Q3SYC2 334 aa8.73□□□□□ -1.01
NSMCE1-202ENST00000561960 ACSM3Q53FZ2 586 aa8.73□□□□□ -1.01
NSMCE1-202ENST00000561960 BTNL8Q6UX41 500 aa8.73□□□□□ -1.01
NSMCE1-202ENST00000561960 MOB1BQ7L9L4 216 aa8.73□□□□□ -1.01
NSMCE1-202ENST00000561960 LYG2Q86SG7 212 aa8.73□□□□□ -1.01
NSMCE1-202ENST00000561960 OR52B4Q8NGK2 314 aa8.73□□□□□ -1.01
NSMCE1-202ENST00000561960 USMG5Q96IX5 58 aa8.73□□□□□ -1.01
NSMCE1-202ENST00000561960 GFI1Q99684 422 aa8.73□□□□□ -1.01
NSMCE1-202ENST00000561960 GGTLC1Q9BX51 225 aa8.73□□□□□ -1.01
NSMCE1-202ENST00000561960 PECRQ9BY49 303 aa8.73□□□□□ -1.01
NSMCE1-202ENST00000561960 ZNF430Q9H8G1 570 aaPredicted RBP8.73□□□□□ -1.01
NSMCE1-202ENST00000561960 LINC00473A8K010 186 aa8.72□□□□□ -1.01
NSMCE1-202ENST00000561960 TMEM14DPA8MWL7 114 aa8.72□□□□□ -1.01
NSMCE1-202ENST00000561960 MYL12BO14950 172 aa8.72□□□□□ -1.01
NSMCE1-202ENST00000561960 TUSC2O75896 110 aa8.72□□□□□ -1.01
NSMCE1-202ENST00000561960 GSTT2P0CG29 244 aa8.72□□□□□ -1.01
NSMCE1-202ENST00000561960 GSTT2BP0CG30 244 aa8.72□□□□□ -1.01
NSMCE1-202ENST00000561960 KIR2DS2P43631 304 aa8.72□□□□□ -1.01
NSMCE1-202ENST00000561960 PRSS8Q16651 343 aa8.72□□□□□ -1.01
NSMCE1-202ENST00000561960 TM4SF20Q53R12 229 aa8.72□□□□□ -1.01
NSMCE1-202ENST00000561960 CEMP1Q6PRD7 247 aaPredicted RBP8.72□□□□□ -1.01
NSMCE1-202ENST00000561960 CLEC19AQ6UXS0 136 aa8.72□□□□□ -1.01
NSMCE1-202ENST00000561960 OR6M1Q8NGM8 313 aa8.72□□□□□ -1.01
NSMCE1-202ENST00000561960 OR2K2Q8NGT1 345 aa8.72□□□□□ -1.01
NSMCE1-202ENST00000561960 TMEM203Q969S6 136 aa8.72□□□□□ -1.01
NSMCE1-202ENST00000561960 CMSS1Q9BQ75 279 aaKnown RBP8.72□□□□□ -1.01
NSMCE1-202ENST00000561960 TM2D1Q9BX74 207 aa8.72□□□□□ -1.01
NSMCE1-202ENST00000561960 C12orf4Q9NQ89 552 aa8.72□□□□□ -1.01
NSMCE1-202ENST00000561960 SMPD3Q9NY59 655 aaPredicted RBP8.72□□□□□ -1.01
NSMCE1-202ENST00000561960 RBM7Q9Y580 266 aaKnown RBP8.72□□□□□ -1.01
NSMCE1-202ENST00000561960 DMRT1Q9Y5R6 373 aa8.72□□□□□ -1.01
NSMCE1-202ENST00000561960 LOC102724200A0A096LPH7 203 aaPredicted RBP8.71□□□□□ -1.02
NSMCE1-202ENST00000561960 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.71□□□□□ -1.02
NSMCE1-202ENST00000561960 NUPR2A6NF83 97 aa8.71□□□□□ -1.02
NSMCE1-202ENST00000561960 S1PR2O95136 353 aa8.71□□□□□ -1.02
NSMCE1-202ENST00000561960 NDUFB8O95169 186 aa8.71□□□□□ -1.02
NSMCE1-202ENST00000561960 GNAO1P09471 354 aa8.71□□□□□ -1.02
NSMCE1-202ENST00000561960 SAA1P0DJI8 122 aaPredicted RBP8.71□□□□□ -1.02
NSMCE1-202ENST00000561960 RPL35AP18077 110 aaKnown RBP8.71□□□□□ -1.02
NSMCE1-202ENST00000561960 CBLN1P23435 193 aa8.71□□□□□ -1.02
NSMCE1-202ENST00000561960 TMEM50BP56557 158 aa8.71□□□□□ -1.02
NSMCE1-202ENST00000561960 PRR20EP86478 221 aa8.71□□□□□ -1.02
NSMCE1-202ENST00000561960 PRR20CP86479 221 aa8.71□□□□□ -1.02
NSMCE1-202ENST00000561960 PRR20DP86480 221 aa8.71□□□□□ -1.02
NSMCE1-202ENST00000561960 PRR20BP86481 221 aa8.71□□□□□ -1.02
NSMCE1-202ENST00000561960 PRR20AP86496 221 aa8.71□□□□□ -1.02
NSMCE1-202ENST00000561960 PLAC9Q5JTB6 97 aa8.71□□□□□ -1.02
NSMCE1-202ENST00000561960 GLT8D1Q68CQ7 371 aa8.71□□□□□ -1.02
NSMCE1-202ENST00000561960 ZNF57Q68EA5 555 aaPredicted RBP8.71□□□□□ -1.02
NSMCE1-202ENST00000561960 LAIR2Q6ISS4 152 aa8.71□□□□□ -1.02
NSMCE1-202ENST00000561960 SLC16A13Q7RTY0 426 aa8.71□□□□□ -1.02
NSMCE1-202ENST00000561960 CDH26Q8IXH8 852 aa8.71□□□□□ -1.02
NSMCE1-202ENST00000561960 THRSPQ92748 146 aa8.71□□□□□ -1.02
NSMCE1-202ENST00000561960 PTX4Q96A99 478 aa8.71□□□□□ -1.02
NSMCE1-202ENST00000561960 CCDC140Q96MF4 163 aa8.71□□□□□ -1.02
NSMCE1-202ENST00000561960 FYTTD1Q96QD9 318 aaKnown RBP8.71□□□□□ -1.02
NSMCE1-202ENST00000561960 DCUN1D5Q9BTE7 237 aa8.71□□□□□ -1.02
NSMCE1-202ENST00000561960 PLGRKTQ9HBL7 147 aa8.71□□□□□ -1.02
NSMCE1-202ENST00000561960 S100A14Q9HCY8 104 aa8.71□□□□□ -1.02
NSMCE1-202ENST00000561960 FBXL7Q9UJT9 491 aa8.71□□□□□ -1.02
NSMCE1-202ENST00000561960 AK6Q9Y3D8 172 aaKnown RBP8.71□□□□□ -1.02
NSMCE1-202ENST00000561960 TMEM213A2RRL7 107 aa8.7□□□□□ -1.02
NSMCE1-202ENST00000561960 FAM223BA6NKX1 122 aa8.7□□□□□ -1.02
NSMCE1-202ENST00000561960 TRDCB7Z8K6 153 aa8.7□□□□□ -1.02
NSMCE1-202ENST00000561960 E7EUB6 86 aa8.7□□□□□ -1.02
NSMCE1-202ENST00000561960 ITGB1BP1O14713 200 aa8.7□□□□□ -1.02
NSMCE1-202ENST00000561960 AIREO43918 545 aa8.7□□□□□ -1.02
NSMCE1-202ENST00000561960 UBBP0CG47 229 aa8.7□□□□□ -1.02
NSMCE1-202ENST00000561960 ARL3P36405 182 aa8.7□□□□□ -1.02
NSMCE1-202ENST00000561960 WNT4P56705 351 aa8.7□□□□□ -1.02
NSMCE1-202ENST00000561960 CBX3Q13185 183 aa8.7□□□□□ -1.02
NSMCE1-202ENST00000561960 RTL8BQ17RB0 113 aa8.7□□□□□ -1.02
NSMCE1-202ENST00000561960 VMA21Q3ZAQ7 101 aa8.7□□□□□ -1.02
NSMCE1-202ENST00000561960 TMEM177Q53S58 311 aa8.7□□□□□ -1.02
NSMCE1-202ENST00000561960 C1orf100Q5SVJ3 147 aa8.7□□□□□ -1.02
NSMCE1-202ENST00000561960 ZFP1Q6P2D0 407 aa8.7□□□□□ -1.02
NSMCE1-202ENST00000561960 UNQ9165/PRO28630Q6UXU0 137 aa8.7□□□□□ -1.02
NSMCE1-202ENST00000561960 FAM223AQ8IWN6 122 aa8.7□□□□□ -1.02
NSMCE1-202ENST00000561960 LAX1Q8IWV1 398 aa8.7□□□□□ -1.02
NSMCE1-202ENST00000561960 PQLC1Q8N2U9 271 aa8.7□□□□□ -1.02
NSMCE1-202ENST00000561960 UXS1Q8NBZ7 420 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms