RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 SRPXP78539 464 aa5.63□□□□□ -1.51
TSPAN3-209ENST00000560715 UNC119Q13432 240 aa5.63□□□□□ -1.51
TSPAN3-209ENST00000560715 FOXE3Q13461 319 aa5.63□□□□□ -1.51
TSPAN3-209ENST00000560715 MSMO1Q15800 293 aa5.63□□□□□ -1.51
TSPAN3-209ENST00000560715 MRPL2Q5T653 305 aaKnown RBP5.63□□□□□ -1.51
TSPAN3-209ENST00000560715 TCTEX1D1Q8N7M0 179 aa5.63□□□□□ -1.51
TSPAN3-209ENST00000560715 VN1R2Q8NFZ6 395 aa5.63□□□□□ -1.51
TSPAN3-209ENST00000560715 S1PR3Q99500 378 aa5.63□□□□□ -1.51
TSPAN3-209ENST00000560715 VN1R1Q9GZP7 353 aa5.63□□□□□ -1.51
TSPAN3-209ENST00000560715 ARRDC1-AS1Q9H2J1 176 aa5.63□□□□□ -1.51
TSPAN3-209ENST00000560715 PNRC2Q9NPJ4 139 aaKnown RBP5.63□□□□□ -1.51
TSPAN3-209ENST00000560715 SIGLEC8Q9NYZ4 499 aa5.63□□□□□ -1.51
TSPAN3-209ENST00000560715 TP53TG3Q9ULZ0 132 aa5.63□□□□□ -1.51
TSPAN3-209ENST00000560715 MDC1Q14676 2089 aaKnown RBP5.63□□□□□ -1.51
TSPAN3-209ENST00000560715 ZFP92A6NM28 416 aa5.62□□□□□ -1.51
TSPAN3-209ENST00000560715 GNG7O60262 68 aa5.62□□□□□ -1.51
TSPAN3-209ENST00000560715 MPZL1O95297 269 aa5.62□□□□□ -1.51
TSPAN3-209ENST00000560715 PLAUP00749 431 aa5.62□□□□□ -1.51
TSPAN3-209ENST00000560715 DBIP07108 87 aaKnown RBP5.62□□□□□ -1.51
TSPAN3-209ENST00000560715 UCNP55089 124 aa5.62□□□□□ -1.51
TSPAN3-209ENST00000560715 RPL23P62829 140 aaKnown RBP5.62□□□□□ -1.51
TSPAN3-209ENST00000560715 QRFPP83859 136 aa5.62□□□□□ -1.51
TSPAN3-209ENST00000560715 OR1C1Q15619 314 aa5.62□□□□□ -1.51
TSPAN3-209ENST00000560715 KIAA0895LQ68EN5 471 aa5.62□□□□□ -1.51
TSPAN3-209ENST00000560715 CALHM1Q8IU99 346 aa5.62□□□□□ -1.51
TSPAN3-209ENST00000560715 MUC15Q8N387 334 aa5.62□□□□□ -1.51
TSPAN3-209ENST00000560715 SLC16A11Q8NCK7 471 aa5.62□□□□□ -1.51
TSPAN3-209ENST00000560715 SLC25A44Q96H78 314 aaPredicted RBP5.62□□□□□ -1.51
TSPAN3-209ENST00000560715 SMIM7Q9BQ49 75 aa5.62□□□□□ -1.51
TSPAN3-209ENST00000560715 PRO3102Q9H379 93 aa5.62□□□□□ -1.51
TSPAN3-209ENST00000560715 PATZ1Q9HBE1 687 aaKnown RBP5.62□□□□□ -1.51
TSPAN3-209ENST00000560715 MBNL3Q9NUK0 354 aaKnown RBP5.62□□□□□ -1.51
TSPAN3-209ENST00000560715 THAP10Q9P2Z0 257 aaPredicted RBP5.62□□□□□ -1.51
TSPAN3-209ENST00000560715 SLC22A13Q9Y226 551 aa5.62□□□□□ -1.51
TSPAN3-209ENST00000560715 TMEM14AQ9Y6G1 99 aa5.62□□□□□ -1.51
TSPAN3-209ENST00000560715 MYO7AQ13402 2215 aa5.62□□□□□ -1.51
TSPAN3-209ENST00000560715 ODAMA1E959 279 aa5.62□□□□□ -1.51
TSPAN3-209ENST00000560715 TAX1BP3O14907 124 aa5.62□□□□□ -1.51
TSPAN3-209ENST00000560715 CD99P14209 185 aa5.62□□□□□ -1.51
TSPAN3-209ENST00000560715 CSNK2A2P19784 350 aaPredicted RBP5.62□□□□□ -1.51
TSPAN3-209ENST00000560715 IL3RAP26951 378 aa5.62□□□□□ -1.51
TSPAN3-209ENST00000560715 CDKN2AP42771 156 aaKnown RBP5.62□□□□□ -1.51
TSPAN3-209ENST00000560715 ARG2P78540 354 aa5.62□□□□□ -1.51
TSPAN3-209ENST00000560715 COX15Q7KZN9 410 aa5.62□□□□□ -1.51
TSPAN3-209ENST00000560715 C2orf73Q8N5S3 287 aaPredicted RBP5.62□□□□□ -1.51
TSPAN3-209ENST00000560715 PARLQ9H300 379 aa5.62□□□□□ -1.51
TSPAN3-209ENST00000560715 CRYM-AS1A6NIL9 109 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 KBTBD11O94819 623 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 SP1P08047 785 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 H2BFMP0C1H6 154 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 AADACP22760 399 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 RUNX3Q13761 415 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 UTF1Q5T230 341 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 ZNF776Q68DI1 518 aaPredicted RBP5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 AMMECR1LQ6DCA0 310 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 SLC23A3Q6PIS1 610 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 ODF3L1Q8IXM7 274 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 ZIC4Q8N9L1 334 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 FER1L6-AS1Q8NA97 138 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 OR6N2Q8NGY6 317 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 FAM222BQ8WU58 562 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 PSMF1Q92530 271 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 SARAFQ96BY9 339 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 VDAC3Q9Y277 283 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 V9GYY9 64 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 A0A1B0GWA3 101 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 A0A1W2PNV4 684 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 DUXBA0A1W2PPF3 345 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 G3V3Y1 287 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 H3BTX0 84 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 K7ESM1 405 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 SERF1AO75920 110 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 TMEM50AO95807 157 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 CTSEP14091 401 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 P2RY2P41231 377 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 DNASE1L1P49184 302 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 CRYBA4P53673 196 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 KRTDAPP60985 99 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 ZP4Q12836 540 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 GNMTQ14749 295 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 ZNF787Q6DD87 383 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 TMEM144Q7Z5S9 345 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 MOB3BQ86TA1 216 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 OR1N2Q8NGR9 330 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 COX14Q96I36 57 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 GPX7Q96SL4 187 aaPredicted RBP5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 SDF2Q99470 211 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 SAMD10Q9BYL1 202 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 WDR54Q9H977 334 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 CHD7Q9P2D1 2997 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 GRIFINA4D1Z8 144 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 FCN1O00602 326 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 TRAF3IP2O43734 574 aaPredicted RBP5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 NPIPB7O75200 414 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 NDUFB4O95168 129 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 NHLRC4P0CG21 123 aaPredicted RBP5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 RPL13AP40429 203 aaKnown RBP5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 SSR2P43308 183 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 TAS2R46P59540 309 aa5.61□□□□□ -1.51
TSPAN3-209ENST00000560715 CD226Q15762 336 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms