RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 NOS1APO75052 506 aaPredicted RBP1.98□□□□□ -2.09
LRRC28-218ENST00000560236 FKBP6O75344 327 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 SERPINB7O75635 380 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 OR7A10O76100 309 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 OR2A4O95047 310 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 OR5F1O95221 314 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 CST4P01036 141 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 APOC1P02654 83 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 BPGMP07738 259 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 ZCCHC18P0CG32 403 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 TROVE2P10155 538 aaKnown RBP eCLIP1.98□□□□□ -2.09
LRRC28-218ENST00000560236 MYL2P10916 166 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 PIPP12273 146 aaPredicted RBP1.98□□□□□ -2.09
LRRC28-218ENST00000560236 CTRB1P17538 263 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 CRABP1P29762 137 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 ERP29P30040 261 aaKnown RBP1.98□□□□□ -2.09
LRRC28-218ENST00000560236 PRDX6P30041 224 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 OTX1P32242 354 aaPredicted RBP1.98□□□□□ -2.09
LRRC28-218ENST00000560236 S100A3P33764 101 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 ALDH3B2P48448 385 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 EDDM3BP56851 147 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 FAM3AP98173 230 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 TMEM267Q0VDI3 215 aaPredicted RBP1.98□□□□□ -2.09
LRRC28-218ENST00000560236 ZNF816Q0VGE8 651 aaPredicted RBP1.98□□□□□ -2.09
LRRC28-218ENST00000560236 FADDQ13158 208 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 MADCAM1Q13477 382 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 DNAL1Q4LDG9 190 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 GLYATL3Q5SZD4 288 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 OGFRL1Q5TC84 451 aaPredicted RBP1.98□□□□□ -2.09
LRRC28-218ENST00000560236 ZNF691Q5VV52 312 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 CTRB2Q6GPI1 263 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 DNM1P34Q6PK57 102 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 ATRAIDQ6UW56 229 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 NAA40Q86UY6 237 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 RDH10Q8IZV5 341 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 OR6V1Q8N148 313 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 Q8N6K4 173 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 OR2AE1Q8NHA4 323 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 TRMT10AQ8TBZ6 339 aaKnown RBP1.98□□□□□ -2.09
LRRC28-218ENST00000560236 HAVCR2Q8TDQ0 301 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 ACMSDQ8TDX5 336 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 TWIST2Q8WVJ9 160 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 DYDC1Q8WWB3 177 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 OR5P3Q8WZ94 311 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 PPP1R14BQ96C90 147 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 C5orf30Q96GV9 206 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 RNF170Q96K19 258 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 FAM210BQ96KR6 192 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 SORT1Q99523 831 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 MCHR1Q99705 422 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 RARRES2Q99969 163 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 PRSS27Q9BQR3 290 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 POLR2J2Q9GZM3 115 aaKnown RBP1.98□□□□□ -2.09
LRRC28-218ENST00000560236 YIPF3Q9GZM5 350 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 CST11Q9H112 138 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 ALX4Q9H161 411 aaPredicted RBP1.98□□□□□ -2.09
LRRC28-218ENST00000560236 POLR2J3Q9H1A7 115 aaKnown RBP1.98□□□□□ -2.09
LRRC28-218ENST00000560236 VCXQ9H320 206 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 TMEM38AQ9H6F2 299 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 MEPEQ9NQ76 525 aaPredicted RBP1.98□□□□□ -2.09
LRRC28-218ENST00000560236 ZC4H2Q9NQZ6 224 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 ZNF355PQ9NSJ1 428 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 TAS2R3Q9NYW6 316 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 NDUFA13Q9P0J0 144 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 ANGPT4Q9Y264 503 aa1.98□□□□□ -2.09
LRRC28-218ENST00000560236 TRGV10A0A0A0MS01 117 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 A0A0G2JND7 137 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 A0A1B0GVG6 124 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 OR5B21A6NL26 309 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 E9PBE3 544 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 ZNF701M0R085 212 aaPredicted RBP1.97□□□□□ -2.09
LRRC28-218ENST00000560236 KPNA4O00629 521 aaPredicted RBP1.97□□□□□ -2.09
LRRC28-218ENST00000560236 RFXANKO14593 260 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 GYG2O15488 501 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 PLIN3O60664 434 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 SLC16A7O60669 478 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 MOSP00540 346 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 IFNA5P01569 189 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 HLA-DRB1P01911 266 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 TFF1P04155 84 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 GAPDHP04406 335 aaKnown RBP1.97□□□□□ -2.09
LRRC28-218ENST00000560236 CD1BP29016 333 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 ACTBP60709 375 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 GNG3P63215 75 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 PRDX4Q13162 271 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 ASAH1Q13510 395 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 EIF2B1Q14232 305 aaKnown RBP1.97□□□□□ -2.09
LRRC28-218ENST00000560236 GUCA2BQ16661 112 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 ZNF674Q2M3X9 581 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 DEFB114Q30KQ6 69 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 CCDC153Q494R4 210 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 SLX4IPQ5VYV7 408 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 METTL21CQ5VZV1 264 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 REEP3Q6NUK4 255 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 FAHD1Q6P587 224 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 CD200R1LQ6Q8B3 271 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 IZUMO2Q6UXV1 221 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 ASCL4Q6XD76 172 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 TRAPPC6BQ86SZ2 158 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 YIPF7Q8N8F6 280 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms