RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 APH1AQ96BI3 265 aa6.53□□□□□ -1.36
CHD8-209ENST00000555935 SLC35D1Q9NTN3 355 aa6.53□□□□□ -1.36
CHD8-209ENST00000555935 CRIM1Q9NZV1 1036 aa6.53□□□□□ -1.36
CHD8-209ENST00000555935 RARRES3Q9UL19 164 aa6.53□□□□□ -1.36
CHD8-209ENST00000555935 TRAPPC2LQ9UL33 140 aa6.53□□□□□ -1.36
CHD8-209ENST00000555935 MPC1Q9Y5U8 109 aa6.53□□□□□ -1.36
CHD8-209ENST00000555935 F2Z2F3 143 aa6.52□□□□□ -1.37
CHD8-209ENST00000555935 SS18L1O75177 396 aaPredicted RBP6.52□□□□□ -1.37
CHD8-209ENST00000555935 DEFA4P12838 97 aa6.52□□□□□ -1.37
CHD8-209ENST00000555935 SRD5A2P31213 254 aa6.52□□□□□ -1.37
CHD8-209ENST00000555935 THBS3P49746 956 aa6.52□□□□□ -1.37
CHD8-209ENST00000555935 SSR4P51571 173 aa6.52□□□□□ -1.37
CHD8-209ENST00000555935 PRRX1P54821 245 aa6.52□□□□□ -1.37
CHD8-209ENST00000555935 HTD2P86397 168 aa6.52□□□□□ -1.37
CHD8-209ENST00000555935 PCOLCEQ15113 449 aa6.52□□□□□ -1.37
CHD8-209ENST00000555935 PMCHL1Q16048 86 aa6.52□□□□□ -1.37
CHD8-209ENST00000555935 ZNF718Q3SXZ3 478 aa6.52□□□□□ -1.37
CHD8-209ENST00000555935 Q6P435 159 aa6.52□□□□□ -1.37
CHD8-209ENST00000555935 Q6ZS52 159 aa6.52□□□□□ -1.37
CHD8-209ENST00000555935 TIPARPQ7Z3E1 657 aaKnown RBP6.52□□□□□ -1.37
CHD8-209ENST00000555935 PNKDQ8N490 385 aa6.52□□□□□ -1.37
CHD8-209ENST00000555935 DEFB119Q8N690 84 aa6.52□□□□□ -1.37
CHD8-209ENST00000555935 MRGPRDQ8TDS7 321 aa6.52□□□□□ -1.37
CHD8-209ENST00000555935 FAM103A1Q9BTL3 118 aaKnown RBP6.52□□□□□ -1.37
CHD8-209ENST00000555935 SH2D2AQ9NP31 389 aa6.52□□□□□ -1.37
CHD8-209ENST00000555935 MBNL3Q9NUK0 354 aaKnown RBP6.52□□□□□ -1.37
CHD8-209ENST00000555935 KCNIP1Q9NZI2 227 aa6.52□□□□□ -1.37
CHD8-209ENST00000555935 RNF114Q9Y508 228 aa6.52□□□□□ -1.37
CHD8-209ENST00000555935 CHD9Q3L8U1 2897 aa6.52□□□□□ -1.37
CHD8-209ENST00000555935 LOC102723996A0A087X1L8 192 aa6.52□□□□□ -1.37
CHD8-209ENST00000555935 TRGV10A0A0A0MS01 117 aa6.52□□□□□ -1.37
CHD8-209ENST00000555935 DPRXA6NFQ7 191 aa6.52□□□□□ -1.37
CHD8-209ENST00000555935 ANKRD30BLA7E2S9 258 aa6.52□□□□□ -1.37
CHD8-209ENST00000555935 ZNF324O75467 553 aaPredicted RBP6.52□□□□□ -1.37
CHD8-209ENST00000555935 S1PR2O95136 353 aa6.52□□□□□ -1.37
CHD8-209ENST00000555935 MT-CO2P00403 227 aa6.52□□□□□ -1.37
CHD8-209ENST00000555935 OR10J4P0C629 311 aa6.52□□□□□ -1.37
CHD8-209ENST00000555935 ARL14EPLP0DKL9 152 aa6.52□□□□□ -1.37
CHD8-209ENST00000555935 RAC2P15153 192 aa6.52□□□□□ -1.37
CHD8-209ENST00000555935 B3GALT5-AS1P59052 145 aa6.52□□□□□ -1.37
CHD8-209ENST00000555935 RPP30P78346 268 aaKnown RBP6.52□□□□□ -1.37
CHD8-209ENST00000555935 SSPNQ14714 243 aa6.52□□□□□ -1.37
CHD8-209ENST00000555935 SYT13Q7L8C5 426 aa6.52□□□□□ -1.37
CHD8-209ENST00000555935 WDR31Q8NA23 367 aa6.52□□□□□ -1.37
CHD8-209ENST00000555935 TSTD1Q8NFU3 115 aa6.52□□□□□ -1.37
CHD8-209ENST00000555935 TMEM45BQ96B21 275 aa6.52□□□□□ -1.37
CHD8-209ENST00000555935 ZNF488Q96MN9 340 aa6.52□□□□□ -1.37
CHD8-209ENST00000555935 ALKBH7Q9BT30 221 aaPredicted RBP6.52□□□□□ -1.37
CHD8-209ENST00000555935 IGHV2-26A0A0B4J1V2 119 aa6.51□□□□□ -1.37
CHD8-209ENST00000555935 IGHV2OR16-5A0A0B4J2B6 119 aa6.51□□□□□ -1.37
CHD8-209ENST00000555935 IGHV2-70DA0A0C4DH43 119 aa6.51□□□□□ -1.37
CHD8-209ENST00000555935 A0A1W2PS18 150 aa6.51□□□□□ -1.37
CHD8-209ENST00000555935 C15orf62A8K5M9 175 aa6.51□□□□□ -1.37
CHD8-209ENST00000555935 J3QT63 122 aa6.51□□□□□ -1.37
CHD8-209ENST00000555935 SLC17A3O00476 420 aa6.51□□□□□ -1.37
CHD8-209ENST00000555935 CXCL13O43927 109 aa6.51□□□□□ -1.37
CHD8-209ENST00000555935 RAMP3O60896 148 aa6.51□□□□□ -1.37
CHD8-209ENST00000555935 WISP2O76076 250 aa6.51□□□□□ -1.37
CHD8-209ENST00000555935 TSPOP30536 169 aa6.51□□□□□ -1.37
CHD8-209ENST00000555935 EDDM3BP56851 147 aa6.51□□□□□ -1.37
CHD8-209ENST00000555935 RPS20P60866 119 aaKnown RBP6.51□□□□□ -1.37
CHD8-209ENST00000555935 PSG7Q13046 419 aa6.51□□□□□ -1.37
CHD8-209ENST00000555935 GCSAMLQ5JQS6 135 aa6.51□□□□□ -1.37
CHD8-209ENST00000555935 H2BFWTQ7Z2G1 175 aa6.51□□□□□ -1.37
CHD8-209ENST00000555935 GGNQ86UU5 652 aa6.51□□□□□ -1.37
CHD8-209ENST00000555935 ZDHHC16Q969W1 377 aa6.51□□□□□ -1.37
CHD8-209ENST00000555935 UHRF2Q96PU4 802 aa6.51□□□□□ -1.37
CHD8-209ENST00000555935 TAAR6Q96RI8 345 aa6.51□□□□□ -1.37
CHD8-209ENST00000555935 TUBG2Q9NRH3 451 aa6.51□□□□□ -1.37
CHD8-209ENST00000555935 CLEC1BQ9P126 229 aa6.51□□□□□ -1.37
CHD8-209ENST00000555935 NAT8BQ9UHF3 227 aa6.51□□□□□ -1.37
CHD8-209ENST00000555935 PPIAL4AQ9Y536 164 aa6.51□□□□□ -1.37
CHD8-209ENST00000555935 MED12Q93074 2177 aa6.51□□□□□ -1.37
CHD8-209ENST00000555935 ADAMTS20P59510 1910 aa6.51□□□□□ -1.37
CHD8-209ENST00000555935 IGHV1-69-2A0A0G2JMI3 117 aa6.51□□□□□ -1.37
CHD8-209ENST00000555935 C5orf49A4QMS7 147 aa6.51□□□□□ -1.37
CHD8-209ENST00000555935 K7EN84 100 aa6.51□□□□□ -1.37
CHD8-209ENST00000555935 AQP7O14520 342 aa6.51□□□□□ -1.37
CHD8-209ENST00000555935 CDIPTO14735 213 aa6.51□□□□□ -1.37
CHD8-209ENST00000555935 SH2D1BO14796 132 aa6.51□□□□□ -1.37
CHD8-209ENST00000555935 PPBPP02775 128 aa6.51□□□□□ -1.37
CHD8-209ENST00000555935 EN2P19622 333 aaPredicted RBP6.51□□□□□ -1.37
CHD8-209ENST00000555935 CCNOP22674 350 aa6.51□□□□□ -1.37
CHD8-209ENST00000555935 RHOBP62745 196 aa6.51□□□□□ -1.37
CHD8-209ENST00000555935 RPL31P62899 125 aaKnown RBP6.51□□□□□ -1.37
CHD8-209ENST00000555935 CX3CL1P78423 397 aa6.51□□□□□ -1.37
CHD8-209ENST00000555935 ZNF816Q0VGE8 651 aaPredicted RBP6.51□□□□□ -1.37
CHD8-209ENST00000555935 EIF4EBP1Q13541 118 aaPredicted RBP6.51□□□□□ -1.37
CHD8-209ENST00000555935 PDLIM3Q53GG5 364 aaPredicted RBP6.51□□□□□ -1.37
CHD8-209ENST00000555935 MRPL14Q6P1L8 145 aaKnown RBP6.51□□□□□ -1.37
CHD8-209ENST00000555935 RPS19BP1Q86WX3 136 aaKnown RBP6.51□□□□□ -1.37
CHD8-209ENST00000555935 MCEMP1Q8IX19 187 aa6.51□□□□□ -1.37
CHD8-209ENST00000555935 Q8IYB0 196 aa6.51□□□□□ -1.37
CHD8-209ENST00000555935 OR2M7Q8NG81 312 aa6.51□□□□□ -1.37
CHD8-209ENST00000555935 EAF1Q96JC9 268 aaPredicted RBP6.51□□□□□ -1.37
CHD8-209ENST00000555935 LINC00470Q9BZP3 86 aa6.51□□□□□ -1.37
CHD8-209ENST00000555935 ARL2-SNX15V9GYD0 113 aa6.51□□□□□ -1.37
CHD8-209ENST00000555935 V9GYV3 84 aa6.51□□□□□ -1.37
CHD8-209ENST00000555935 TNRC6BQ9UPQ9 1833 aaKnown RBP6.51□□□□□ -1.37
CHD8-209ENST00000555935 UNC80Q8N2C7 3258 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms