RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 ZNF818PQ6ZRF7 136 aa9.87□□□□□ -0.83
SYNE2-208ENST00000553289 LPAR2Q9HBW0 351 aa9.87□□□□□ -0.83
SYNE2-208ENST00000553289 ZNF883P0CG24 379 aa9.87□□□□□ -0.83
SYNE2-208ENST00000553289 OR51G1Q8NGK1 321 aa9.87□□□□□ -0.83
SYNE2-208ENST00000553289 TMEM56-RWDD3S4R434 201 aa9.87□□□□□ -0.83
SYNE2-208ENST00000553289 IGKV3D-11A0A0A0MRZ8 115 aa9.87□□□□□ -0.83
SYNE2-208ENST00000553289 TMEM250H0YL14 139 aa9.87□□□□□ -0.83
SYNE2-208ENST00000553289 SYNGR3O43761 229 aa9.87□□□□□ -0.83
SYNE2-208ENST00000553289 ASPHD2Q6ICH7 369 aa9.87□□□□□ -0.83
SYNE2-208ENST00000553289 Q6ZT83 130 aa9.87□□□□□ -0.83
SYNE2-208ENST00000553289 OR11H4Q8NGC9 324 aa9.87□□□□□ -0.83
SYNE2-208ENST00000553289 C16orf92Q96LL3 132 aa9.87□□□□□ -0.83
SYNE2-208ENST00000553289 HSPB9Q9BQS6 159 aa9.87□□□□□ -0.83
SYNE2-208ENST00000553289 RNF115Q9Y4L5 304 aa9.87□□□□□ -0.83
SYNE2-208ENST00000553289 ATG2BQ96BY7 2078 aa9.87□□□□□ -0.83
SYNE2-208ENST00000553289 ZG16O60844 167 aa9.87□□□□□ -0.83
SYNE2-208ENST00000553289 IGLV3-19P01714 112 aa9.87□□□□□ -0.83
SYNE2-208ENST00000553289 IFITM2Q01629 132 aa9.87□□□□□ -0.83
SYNE2-208ENST00000553289 CDCP2Q5VXM1 449 aa9.87□□□□□ -0.83
SYNE2-208ENST00000553289 HILPDAQ9Y5L2 63 aa9.87□□□□□ -0.83
SYNE2-208ENST00000553289 S1PR2O95136 353 aa9.86□□□□□ -0.83
SYNE2-208ENST00000553289 AGAP20933 346 aa9.86□□□□□ -0.83
SYNE2-208ENST00000553289 GGACTQ9BVM4 153 aa9.86□□□□□ -0.83
SYNE2-208ENST00000553289 IGKV3-7A0A075B6H7 116 aa9.86□□□□□ -0.83
SYNE2-208ENST00000553289 M0R3E3 92 aa9.86□□□□□ -0.83
SYNE2-208ENST00000553289 SP9P0CG40 484 aa9.86□□□□□ -0.83
SYNE2-208ENST00000553289 PPP1R32Q7Z5V6 425 aa9.86□□□□□ -0.83
SYNE2-208ENST00000553289 GATAD1Q8WUU5 269 aa9.86□□□□□ -0.83
SYNE2-208ENST00000553289 TLNRD1Q9H1K6 362 aa9.86□□□□□ -0.83
SYNE2-208ENST00000553289 OR51M1Q9H341 326 aa9.86□□□□□ -0.83
SYNE2-208ENST00000553289 VENTXO95231 258 aa9.86□□□□□ -0.83
SYNE2-208ENST00000553289 HCP5Q6MZN7 132 aa9.86□□□□□ -0.83
SYNE2-208ENST00000553289 DRAM1Q8N682 238 aa9.86□□□□□ -0.83
SYNE2-208ENST00000553289 BRWD3Q6RI45 1802 aa9.86□□□□□ -0.83
SYNE2-208ENST00000553289 NPIPB6E9PJ23 425 aa9.86□□□□□ -0.83
SYNE2-208ENST00000553289 SLC25A17O43808 307 aa9.86□□□□□ -0.83
SYNE2-208ENST00000553289 THY1P04216 161 aa9.86□□□□□ -0.83
SYNE2-208ENST00000553289 ZNF25P17030 456 aaPredicted RBP9.86□□□□□ -0.83
SYNE2-208ENST00000553289 KLK2P20151 261 aa9.86□□□□□ -0.83
SYNE2-208ENST00000553289 CA7P43166 264 aa9.86□□□□□ -0.83
SYNE2-208ENST00000553289 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.86□□□□□ -0.83
SYNE2-208ENST00000553289 FOXD3Q9UJU5 478 aaPredicted RBP9.86□□□□□ -0.83
SYNE2-208ENST00000553289 TRBV23-1A0A0A0MS06 115 aa9.85□□□□□ -0.83
SYNE2-208ENST00000553289 PPIAL4CA0A0B4J2A2 164 aa9.85□□□□□ -0.83
SYNE2-208ENST00000553289 CTSBP07858 339 aa9.85□□□□□ -0.83
SYNE2-208ENST00000553289 ARL14EPLP0DKL9 152 aa9.85□□□□□ -0.83
SYNE2-208ENST00000553289 PPIAL4GP0DN37 164 aa9.85□□□□□ -0.83
SYNE2-208ENST00000553289 ZNF708P17019 499 aa9.85□□□□□ -0.83
SYNE2-208ENST00000553289 CKS2P33552 79 aa9.85□□□□□ -0.83
SYNE2-208ENST00000553289 UNQ5815/PRO19632Q6UWF5 114 aa9.85□□□□□ -0.83
SYNE2-208ENST00000553289 C12orf54Q6X4T0 127 aa9.85□□□□□ -0.83
SYNE2-208ENST00000553289 LINC00114Q6XXX2 140 aa9.85□□□□□ -0.83
SYNE2-208ENST00000553289 C1orf162Q8NEQ5 155 aaPredicted RBP9.85□□□□□ -0.83
SYNE2-208ENST00000553289 GALNT14Q96FL9 552 aa9.85□□□□□ -0.83
SYNE2-208ENST00000553289 CLEC7AQ9BXN2 247 aa9.85□□□□□ -0.83
SYNE2-208ENST00000553289 MRPL18Q9H0U6 180 aaKnown RBP9.85□□□□□ -0.83
SYNE2-208ENST00000553289 hCG_38984A0A1B0GV85 526 aa9.85□□□□□ -0.83
SYNE2-208ENST00000553289 C17orf51A8MQB3 221 aa9.85□□□□□ -0.83
SYNE2-208ENST00000553289 H0YL77 283 aa9.85□□□□□ -0.83
SYNE2-208ENST00000553289 CEBPDP49716 269 aaPredicted RBP9.85□□□□□ -0.83
SYNE2-208ENST00000553289 ABHD12Q8N2K0 398 aa9.85□□□□□ -0.83
SYNE2-208ENST00000553289 PLSCR2Q9NRY7 297 aa9.85□□□□□ -0.83
SYNE2-208ENST00000553289 CHCHD2Q9Y6H1 151 aaPredicted RBP9.85□□□□□ -0.83
SYNE2-208ENST00000553289 CA2P00918 260 aa9.85□□□□□ -0.83
SYNE2-208ENST00000553289 GLIPR1P48060 266 aa9.85□□□□□ -0.83
SYNE2-208ENST00000553289 WFDC3Q8IUB2 231 aa9.85□□□□□ -0.83
SYNE2-208ENST00000553289 TMEM70Q9BUB7 260 aa9.85□□□□□ -0.83
SYNE2-208ENST00000553289 COLQQ9Y215 455 aaPredicted RBP9.85□□□□□ -0.83
SYNE2-208ENST00000553289 EPOPA6NHQ4 379 aa9.85□□□□□ -0.83
SYNE2-208ENST00000553289 NPBWR2P48146 333 aa9.85□□□□□ -0.83
SYNE2-208ENST00000553289 C2orf68Q2NKX9 166 aa9.85□□□□□ -0.83
SYNE2-208ENST00000553289 TM4SF20Q53R12 229 aa9.85□□□□□ -0.83
SYNE2-208ENST00000553289 ZNF506Q5JVG8 444 aa9.85□□□□□ -0.83
SYNE2-208ENST00000553289 ZNF841Q6ZN19 808 aa9.85□□□□□ -0.83
SYNE2-208ENST00000553289 ERASQ7Z444 233 aa9.85□□□□□ -0.83
SYNE2-208ENST00000553289 TP53RKQ96S44 253 aa9.85□□□□□ -0.83
SYNE2-208ENST00000553289 IGHV3-72A0A0B4J1Y9 119 aa9.84□□□□□ -0.83
SYNE2-208ENST00000553289 HTN1P15515 57 aa9.84□□□□□ -0.83
SYNE2-208ENST00000553289 NUBP1P53384 320 aa9.84□□□□□ -0.83
SYNE2-208ENST00000553289 ZNF738Q8NE65 137 aa9.84□□□□□ -0.83
SYNE2-208ENST00000553289 TIMP4Q99727 224 aa9.84□□□□□ -0.83
SYNE2-208ENST00000553289 MAP1LC3AQ9H492 121 aa9.84□□□□□ -0.83
SYNE2-208ENST00000553289 MRPS18CQ9Y3D5 142 aaKnown RBP9.84□□□□□ -0.83
SYNE2-208ENST00000553289 GREB1LQ9C091 1923 aaPredicted RBP9.84□□□□□ -0.83
SYNE2-208ENST00000553289 B9A039 149 aa9.84□□□□□ -0.83
SYNE2-208ENST00000553289 LEPROTL1O95214 131 aa9.84□□□□□ -0.83
SYNE2-208ENST00000553289 LIPFP07098 398 aa9.84□□□□□ -0.83
SYNE2-208ENST00000553289 SLC25A53Q5H9E4 307 aa9.84□□□□□ -0.83
SYNE2-208ENST00000553289 TIMM23BQ5SRD1 257 aa9.84□□□□□ -0.83
SYNE2-208ENST00000553289 MEGF10Q96KG7 1140 aa9.84□□□□□ -0.83
SYNE2-208ENST00000553289 ZNF703Q9H7S9 590 aaPredicted RBP9.84□□□□□ -0.83
SYNE2-208ENST00000553289 K7ERU9 68 aa9.84□□□□□ -0.83
SYNE2-208ENST00000553289 GLRXP35754 106 aa9.84□□□□□ -0.83
SYNE2-208ENST00000553289 OR1N2Q8NGR9 330 aa9.84□□□□□ -0.83
SYNE2-208ENST00000553289 SDHCQ99643 169 aaPredicted RBP9.84□□□□□ -0.83
SYNE2-208ENST00000553289 SCN10AQ9Y5Y9 1956 aa9.84□□□□□ -0.83
SYNE2-208ENST00000553289 SIAH2O43255 324 aa9.84□□□□□ -0.83
SYNE2-208ENST00000553289 RECKO95980 971 aa9.84□□□□□ -0.83
SYNE2-208ENST00000553289 SSTR5P35346 364 aa9.84□□□□□ -0.83
SYNE2-208ENST00000553289 TMEM177Q53S58 311 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms