RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 PLAUP00749 431 aa12.69□□□□□ -0.38
CUX1-214ENST00000550008 GAMTQ14353 236 aa12.69□□□□□ -0.38
CUX1-214ENST00000550008 ACP7Q6ZNF0 438 aa12.69□□□□□ -0.38
CUX1-214ENST00000550008 SLC35E3Q7Z769 313 aa12.69□□□□□ -0.38
CUX1-214ENST00000550008 OR5B3Q8NH48 314 aa12.69□□□□□ -0.38
CUX1-214ENST00000550008 BSCL2Q96G97 398 aaPredicted RBP12.69□□□□□ -0.38
CUX1-214ENST00000550008 EGR1P18146 543 aa12.69□□□□□ -0.38
CUX1-214ENST00000550008 QRFPP83859 136 aa12.69□□□□□ -0.38
CUX1-214ENST00000550008 TAF15Q92804 592 aaKnown RBP eCLIP12.69□□□□□ -0.38
CUX1-214ENST00000550008 K7N7A8 449 aa12.68□□□□□ -0.38
CUX1-214ENST00000550008 HPRT1P00492 218 aa12.68□□□□□ -0.38
CUX1-214ENST00000550008 RND3P61587 244 aa12.68□□□□□ -0.38
CUX1-214ENST00000550008 UBE2L3P68036 154 aaKnown RBP12.68□□□□□ -0.38
CUX1-214ENST00000550008 SRSF3P84103 164 aaKnown RBP12.68□□□□□ -0.38
CUX1-214ENST00000550008 HCP5Q6MZN7 132 aa12.68□□□□□ -0.38
CUX1-214ENST00000550008 FAM216AQ8WUB2 273 aa12.68□□□□□ -0.38
CUX1-214ENST00000550008 RAB1CQ92928 201 aa12.68□□□□□ -0.38
CUX1-214ENST00000550008 CYYR1Q96J86 154 aa12.68□□□□□ -0.38
CUX1-214ENST00000550008 RPRMQ9NS64 109 aa12.68□□□□□ -0.38
CUX1-214ENST00000550008 KCNMB2Q9Y691 235 aa12.68□□□□□ -0.38
CUX1-214ENST00000550008 ARL3P36405 182 aa12.68□□□□□ -0.38
CUX1-214ENST00000550008 MIC13Q5XKP0 118 aa12.68□□□□□ -0.38
CUX1-214ENST00000550008 LRP11Q86VZ4 500 aa12.68□□□□□ -0.38
CUX1-214ENST00000550008 PRRC2CQ9Y520 2896 aaKnown RBP12.68□□□□□ -0.38
CUX1-214ENST00000550008 IGKV3D-15A0A087WSY6 115 aa12.68□□□□□ -0.38
CUX1-214ENST00000550008 SELLP14151 372 aa12.68□□□□□ -0.38
CUX1-214ENST00000550008 HOXB1P14653 301 aaPredicted RBP12.68□□□□□ -0.38
CUX1-214ENST00000550008 RAB4AP20338 218 aa12.68□□□□□ -0.38
CUX1-214ENST00000550008 NRN1LQ496H8 165 aa12.68□□□□□ -0.38
CUX1-214ENST00000550008 RAB1BQ9H0U4 201 aa12.68□□□□□ -0.38
CUX1-214ENST00000550008 UBTD1Q9HAC8 227 aa12.68□□□□□ -0.38
CUX1-214ENST00000550008 TUBD1Q9UJT1 453 aa12.68□□□□□ -0.38
CUX1-214ENST00000550008 OR51B2Q9Y5P1 312 aa12.68□□□□□ -0.38
CUX1-214ENST00000550008 TLN1Q9Y490 2541 aaKnown RBP12.67□□□□□ -0.38
CUX1-214ENST00000550008 RAB5AP20339 215 aa12.67□□□□□ -0.38
CUX1-214ENST00000550008 UCP1P25874 307 aa12.67□□□□□ -0.38
CUX1-214ENST00000550008 HOXA4Q00056 320 aaPredicted RBP12.67□□□□□ -0.38
CUX1-214ENST00000550008 OR1B1Q8NGR6 318 aa12.67□□□□□ -0.38
CUX1-214ENST00000550008 MEGF10Q96KG7 1140 aa12.67□□□□□ -0.38
CUX1-214ENST00000550008 VPS25Q9BRG1 176 aa12.67□□□□□ -0.38
CUX1-214ENST00000550008 TMEM140Q9NV12 185 aa12.67□□□□□ -0.38
CUX1-214ENST00000550008 HILPDAQ9Y5L2 63 aa12.67□□□□□ -0.38
CUX1-214ENST00000550008 CEACAM1P13688 526 aa12.67□□□□□ -0.38
CUX1-214ENST00000550008 LYZP61626 148 aa12.67□□□□□ -0.38
CUX1-214ENST00000550008 MRGPRGQ86SM5 289 aa12.67□□□□□ -0.38
CUX1-214ENST00000550008 ZNF714Q96N38 554 aa12.67□□□□□ -0.38
CUX1-214ENST00000550008 MALRD1Q5VYJ5 2156 aa12.67□□□□□ -0.38
CUX1-214ENST00000550008 GFRA3O60609 400 aa12.67□□□□□ -0.38
CUX1-214ENST00000550008 PTBP3O95758 552 aaKnown RBP12.67□□□□□ -0.38
CUX1-214ENST00000550008 GLRXP35754 106 aa12.67□□□□□ -0.38
CUX1-214ENST00000550008 PRRX1P54821 245 aa12.67□□□□□ -0.38
CUX1-214ENST00000550008 RFNGQ9Y644 331 aa12.67□□□□□ -0.38
CUX1-214ENST00000550008 CHD7Q9P2D1 2997 aa12.67□□□□□ -0.38
CUX1-214ENST00000550008 CSPG4Q6UVK1 2322 aa12.67□□□□□ -0.38
CUX1-214ENST00000550008 CTXND1A0A1B0GTU2 59 aa12.67□□□□□ -0.38
CUX1-214ENST00000550008 TGOLN2O43493 480 aa12.67□□□□□ -0.38
CUX1-214ENST00000550008 KIR2DS2P43631 304 aa12.67□□□□□ -0.38
CUX1-214ENST00000550008 SLC24A4Q8NFF2 622 aa12.67□□□□□ -0.38
CUX1-214ENST00000550008 DANCRP0C864 163 aa12.66□□□□□ -0.38
CUX1-214ENST00000550008 BCL2P10415 239 aa12.66□□□□□ -0.38
CUX1-214ENST00000550008 CNN1P51911 297 aaKnown RBP12.66□□□□□ -0.38
CUX1-214ENST00000550008 COTL1Q14019 142 aa12.66□□□□□ -0.38
CUX1-214ENST00000550008 TIMM23BQ5SRD1 257 aa12.66□□□□□ -0.38
CUX1-214ENST00000550008 LINC00469Q8N7U9 141 aa12.66□□□□□ -0.38
CUX1-214ENST00000550008 ANKHD1Q8IWZ3 2542 aaKnown RBP12.66□□□□□ -0.38
CUX1-214ENST00000550008 LTBP2Q14767 1821 aa12.66□□□□□ -0.38
CUX1-214ENST00000550008 CBY3A6NI87 242 aa12.66□□□□□ -0.38
CUX1-214ENST00000550008 OTX1P32242 354 aaPredicted RBP12.66□□□□□ -0.38
CUX1-214ENST00000550008 FAM117AQ9C073 453 aa12.66□□□□□ -0.38
CUX1-214ENST00000550008 PPP1R14DQ9NXH3 145 aa12.66□□□□□ -0.38
CUX1-214ENST00000550008 HSPB1P04792 205 aaKnown RBP12.66□□□□□ -0.38
CUX1-214ENST00000550008 SLC25A5P05141 298 aaKnown RBP12.66□□□□□ -0.38
CUX1-214ENST00000550008 LHFPL1Q86WI0 220 aa12.66□□□□□ -0.38
CUX1-214ENST00000550008 SLC45A2Q9UMX9 530 aa12.66□□□□□ -0.38
CUX1-214ENST00000550008 MMDQ15546 238 aa12.65□□□□□ -0.38
CUX1-214ENST00000550008 Q56UQ5 140 aa12.65□□□□□ -0.38
CUX1-214ENST00000550008 TEPPQ6URK8 271 aa12.65□□□□□ -0.38
CUX1-214ENST00000550008 RAB24Q969Q5 203 aa12.65□□□□□ -0.38
CUX1-214ENST00000550008 GP6Q9HCN6 339 aa12.65□□□□□ -0.38
CUX1-214ENST00000550008 FKBP11Q9NYL4 201 aa12.65□□□□□ -0.38
CUX1-214ENST00000550008 CLCF1Q9UBD9 225 aa12.65□□□□□ -0.38
CUX1-214ENST00000550008 PRNDQ9UKY0 176 aa12.65□□□□□ -0.38
CUX1-214ENST00000550008 SLC25A17O43808 307 aa12.65□□□□□ -0.38
CUX1-214ENST00000550008 CLEC3BP05452 202 aa12.65□□□□□ -0.38
CUX1-214ENST00000550008 HOXD4P09016 255 aaPredicted RBP12.65□□□□□ -0.38
CUX1-214ENST00000550008 FAM157CP0CG43 387 aa12.65□□□□□ -0.38
CUX1-214ENST00000550008 S100A7AQ86SG5 101 aa12.65□□□□□ -0.38
CUX1-214ENST00000550008 H1FOOQ8IZA3 346 aaPredicted RBP12.65□□□□□ -0.38
CUX1-214ENST00000550008 PCGF1Q9BSM1 259 aa12.65□□□□□ -0.38
CUX1-214ENST00000550008 TRAPPC1Q9Y5R8 145 aa12.65□□□□□ -0.38
CUX1-214ENST00000550008 A0A1W2PN81 502 aa12.65□□□□□ -0.38
CUX1-214ENST00000550008 C19orf67A6NJJ6 358 aa12.65□□□□□ -0.38
CUX1-214ENST00000550008 PGA5P0DJD9 388 aa12.65□□□□□ -0.38
CUX1-214ENST00000550008 CD40P25942 277 aa12.65□□□□□ -0.38
CUX1-214ENST00000550008 GNG4P50150 75 aa12.65□□□□□ -0.38
CUX1-214ENST00000550008 KHDC1LQ5JSQ8 128 aa12.65□□□□□ -0.38
CUX1-214ENST00000550008 QTRT1Q9BXR0 403 aaKnown RBP12.65□□□□□ -0.38
CUX1-214ENST00000550008 PXMP4Q9Y6I8 212 aa12.65□□□□□ -0.38
CUX1-214ENST00000550008 REG1AP05451 166 aa12.65□□□□□ -0.39
CUX1-214ENST00000550008 OR10J1P30954 320 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms