RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 GDF15Q99988 308 aa10.42□□□□□ -0.74
NPC1L1-204ENST00000546276 ODAMA1E959 279 aa10.42□□□□□ -0.74
NPC1L1-204ENST00000546276 K7ERU9 68 aa10.42□□□□□ -0.74
NPC1L1-204ENST00000546276 GNG7O60262 68 aa10.42□□□□□ -0.74
NPC1L1-204ENST00000546276 HYPMO75409 117 aa10.42□□□□□ -0.74
NPC1L1-204ENST00000546276 CD82P27701 267 aa10.42□□□□□ -0.74
NPC1L1-204ENST00000546276 SELENOTP62341 195 aa10.42□□□□□ -0.74
NPC1L1-204ENST00000546276 SLC25A53Q5H9E4 307 aa10.42□□□□□ -0.74
NPC1L1-204ENST00000546276 GBGT1Q8N5D6 347 aa10.42□□□□□ -0.74
NPC1L1-204ENST00000546276 MAFAQ8NHW3 353 aaPredicted RBP10.42□□□□□ -0.74
NPC1L1-204ENST00000546276 NPCDR1Q9BY65 106 aa10.42□□□□□ -0.74
NPC1L1-204ENST00000546276 RTN4RQ9BZR6 473 aa10.42□□□□□ -0.74
NPC1L1-204ENST00000546276 CDC42EP3Q9UKI2 254 aa10.42□□□□□ -0.74
NPC1L1-204ENST00000546276 A0A1W2PQM1 296 aa10.42□□□□□ -0.74
NPC1L1-204ENST00000546276 LNP1A1A4G5 178 aa10.42□□□□□ -0.74
NPC1L1-204ENST00000546276 C5orf52A6NGY3 159 aa10.42□□□□□ -0.74
NPC1L1-204ENST00000546276 LDLRAD4O15165 306 aa10.42□□□□□ -0.74
NPC1L1-204ENST00000546276 FXYD3Q14802 87 aa10.42□□□□□ -0.74
NPC1L1-204ENST00000546276 SSX8Q7RTT4 187 aa10.42□□□□□ -0.74
NPC1L1-204ENST00000546276 TCF19Q9Y242 345 aa10.42□□□□□ -0.74
NPC1L1-204ENST00000546276 SCGB1C2P0DMR2 95 aa10.42□□□□□ -0.74
NPC1L1-204ENST00000546276 CRYBB3P26998 211 aa10.42□□□□□ -0.74
NPC1L1-204ENST00000546276 RTP5Q14D33 572 aa10.42□□□□□ -0.74
NPC1L1-204ENST00000546276 Q1RN00 199 aa10.42□□□□□ -0.74
NPC1L1-204ENST00000546276 TMEM116Q8NCL8 245 aa10.42□□□□□ -0.74
NPC1L1-204ENST00000546276 OR2T8A6NH00 312 aa10.41□□□□□ -0.74
NPC1L1-204ENST00000546276 SOD3P08294 240 aa10.41□□□□□ -0.74
NPC1L1-204ENST00000546276 CBLN1P23435 193 aa10.41□□□□□ -0.74
NPC1L1-204ENST00000546276 MST1P26927 711 aa10.41□□□□□ -0.74
NPC1L1-204ENST00000546276 KIAA1644Q3SXP7 199 aa10.41□□□□□ -0.74
NPC1L1-204ENST00000546276 PMS2CLQ68D20 193 aa10.41□□□□□ -0.74
NPC1L1-204ENST00000546276 FAM214BQ7L5A3 538 aa10.41□□□□□ -0.74
NPC1L1-204ENST00000546276 FGF11Q92914 225 aa10.41□□□□□ -0.74
NPC1L1-204ENST00000546276 SFXN3Q9BWM7 321 aa10.41□□□□□ -0.74
NPC1L1-204ENST00000546276 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.41□□□□□ -0.74
NPC1L1-204ENST00000546276 GCHFRP30047 84 aa10.41□□□□□ -0.74
NPC1L1-204ENST00000546276 REG1BP48304 166 aa10.41□□□□□ -0.74
NPC1L1-204ENST00000546276 RPL31P62899 125 aaKnown RBP10.41□□□□□ -0.74
NPC1L1-204ENST00000546276 ZNF525Q8N782 197 aa10.41□□□□□ -0.74
NPC1L1-204ENST00000546276 RBM14Q96PK6 669 aaKnown RBP10.41□□□□□ -0.74
NPC1L1-204ENST00000546276 ZSWIM8A7E2V4 1837 aa10.41□□□□□ -0.74
NPC1L1-204ENST00000546276 C8orf88P0DMB2 117 aa10.41□□□□□ -0.74
NPC1L1-204ENST00000546276 PTGDSP41222 190 aa10.41□□□□□ -0.74
NPC1L1-204ENST00000546276 FAM166AQ6J272 317 aa10.41□□□□□ -0.74
NPC1L1-204ENST00000546276 WDYHV1Q96HA8 205 aa10.41□□□□□ -0.74
NPC1L1-204ENST00000546276 HIGD1AQ9Y241 93 aa10.41□□□□□ -0.74
NPC1L1-204ENST00000546276 RLFQ13129 1914 aa10.41□□□□□ -0.74
NPC1L1-204ENST00000546276 OR4A47Q6IF82 309 aa10.41□□□□□ -0.74
NPC1L1-204ENST00000546276 HEPN1Q6WQI6 88 aa10.41□□□□□ -0.74
NPC1L1-204ENST00000546276 ABHD12Q8N2K0 398 aa10.41□□□□□ -0.74
NPC1L1-204ENST00000546276 JPT1Q9UK76 154 aa10.41□□□□□ -0.74
NPC1L1-204ENST00000546276 EPOPA6NHQ4 379 aa10.4□□□□□ -0.74
NPC1L1-204ENST00000546276 DLL1O00548 723 aa10.4□□□□□ -0.74
NPC1L1-204ENST00000546276 SNRPCP09234 159 aaKnown RBP10.4□□□□□ -0.74
NPC1L1-204ENST00000546276 C12orf54Q6X4T0 127 aa10.4□□□□□ -0.74
NPC1L1-204ENST00000546276 LHFPL1Q86WI0 220 aa10.4□□□□□ -0.74
NPC1L1-204ENST00000546276 DOLPP1Q86YN1 238 aa10.4□□□□□ -0.74
NPC1L1-204ENST00000546276 OR10S1Q8NGN2 331 aa10.4□□□□□ -0.74
NPC1L1-204ENST00000546276 FAM222BQ8WU58 562 aa10.4□□□□□ -0.74
NPC1L1-204ENST00000546276 DNASE2BQ8WZ79 361 aa10.4□□□□□ -0.74
NPC1L1-204ENST00000546276 LINC00470Q9BZP3 86 aa10.4□□□□□ -0.74
NPC1L1-204ENST00000546276 WFDC1Q9HC57 220 aa10.4□□□□□ -0.74
NPC1L1-204ENST00000546276 INSIG2Q9Y5U4 225 aa10.4□□□□□ -0.74
NPC1L1-204ENST00000546276 KIF26BQ2KJY2 2108 aa10.4□□□□□ -0.74
NPC1L1-204ENST00000546276 HIST1H2BKO60814 126 aa10.4□□□□□ -0.74
NPC1L1-204ENST00000546276 HIST1H2BJP06899 126 aa10.4□□□□□ -0.74
NPC1L1-204ENST00000546276 HIST1H2BOP23527 126 aa10.4□□□□□ -0.74
NPC1L1-204ENST00000546276 HIST1H2BBP33778 126 aa10.4□□□□□ -0.74
NPC1L1-204ENST00000546276 HIST1H2BDP58876 126 aa10.4□□□□□ -0.74
NPC1L1-204ENST00000546276 HIST1H2BCP62807 126 aa10.4□□□□□ -0.74
NPC1L1-204ENST00000546276 HIST2H2BEQ16778 126 aa10.4□□□□□ -0.74
NPC1L1-204ENST00000546276 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.4□□□□□ -0.74
NPC1L1-204ENST00000546276 ASCL5Q7RTU5 278 aa10.4□□□□□ -0.74
NPC1L1-204ENST00000546276 PRNTQ86SH4 94 aa10.4□□□□□ -0.74
NPC1L1-204ENST00000546276 SAP25Q8TEE9 199 aa10.4□□□□□ -0.74
NPC1L1-204ENST00000546276 HIST1H2BHQ93079 126 aa10.4□□□□□ -0.74
NPC1L1-204ENST00000546276 HIST1H2BNQ99877 126 aa10.4□□□□□ -0.74
NPC1L1-204ENST00000546276 HIST1H2BMQ99879 126 aa10.4□□□□□ -0.74
NPC1L1-204ENST00000546276 CALYQ9NYX4 217 aa10.4□□□□□ -0.74
NPC1L1-204ENST00000546276 ZNF319Q9P2F9 582 aa10.4□□□□□ -0.74
NPC1L1-204ENST00000546276 SLC25A10Q9UBX3 287 aaPredicted RBP10.4□□□□□ -0.74
NPC1L1-204ENST00000546276 ZFP30Q9Y2G7 519 aa10.4□□□□□ -0.74
NPC1L1-204ENST00000546276 TPRP12270 2363 aaKnown RBP10.4□□□□□ -0.74
NPC1L1-204ENST00000546276 LOC102724200A0A096LPH7 203 aaPredicted RBP10.4□□□□□ -0.74
NPC1L1-204ENST00000546276 M0R296 226 aa10.4□□□□□ -0.74
NPC1L1-204ENST00000546276 RHBDL1O75783 438 aa10.4□□□□□ -0.74
NPC1L1-204ENST00000546276 NUBP1P53384 320 aa10.4□□□□□ -0.74
NPC1L1-204ENST00000546276 LYZL4Q96KX0 146 aa10.4□□□□□ -0.74
NPC1L1-204ENST00000546276 ATG101Q9BSB4 218 aa10.4□□□□□ -0.74
NPC1L1-204ENST00000546276 AHCTF1Q8WYP5 2266 aa10.4□□□□□ -0.75
NPC1L1-204ENST00000546276 LEPROTL1O95214 131 aa10.4□□□□□ -0.75
NPC1L1-204ENST00000546276 ORM1P02763 201 aa10.4□□□□□ -0.75
NPC1L1-204ENST00000546276 LYRM7Q5U5X0 104 aa10.4□□□□□ -0.75
NPC1L1-204ENST00000546276 FADS6Q8N9I5 356 aa10.4□□□□□ -0.75
NPC1L1-204ENST00000546276 ZNF430Q9H8G1 570 aaPredicted RBP10.4□□□□□ -0.75
NPC1L1-204ENST00000546276 UFC1Q9Y3C8 167 aa10.4□□□□□ -0.75
NPC1L1-204ENST00000546276 IGKV1D-8A0A087WSZ0 117 aa10.39□□□□□ -0.75
NPC1L1-204ENST00000546276 APELAP0DMC3 54 aa10.39□□□□□ -0.75
NPC1L1-204ENST00000546276 RPL8P62917 257 aaKnown RBP10.39□□□□□ -0.75
NPC1L1-204ENST00000546276 SUPT4H1P63272 117 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms