RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 HIST1H2BBP33778 126 aa6.97□□□□□ -1.29
PRKAB1-207ENST00000542698 MPV17P39210 176 aa6.97□□□□□ -1.29
PRKAB1-207ENST00000542698 HIST1H2BDP58876 126 aa6.97□□□□□ -1.29
PRKAB1-207ENST00000542698 HIST1H2BCP62807 126 aa6.97□□□□□ -1.29
PRKAB1-207ENST00000542698 HIST2H2BEQ16778 126 aa6.97□□□□□ -1.29
PRKAB1-207ENST00000542698 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.97□□□□□ -1.29
PRKAB1-207ENST00000542698 HIST1H2BHQ93079 126 aa6.97□□□□□ -1.29
PRKAB1-207ENST00000542698 SIGLEC12Q96PQ1 595 aa6.97□□□□□ -1.29
PRKAB1-207ENST00000542698 TBX15Q96SF7 602 aa6.97□□□□□ -1.29
PRKAB1-207ENST00000542698 HIST1H2BNQ99877 126 aa6.97□□□□□ -1.29
PRKAB1-207ENST00000542698 HIST1H2BMQ99879 126 aa6.97□□□□□ -1.29
PRKAB1-207ENST00000542698 ZNF581Q9P0T4 197 aa6.97□□□□□ -1.29
PRKAB1-207ENST00000542698 ZNF106Q9H2Y7 1883 aaKnown RBP6.97□□□□□ -1.29
PRKAB1-207ENST00000542698 ODAMA1E959 279 aa6.97□□□□□ -1.29
PRKAB1-207ENST00000542698 EGR1P18146 543 aa6.97□□□□□ -1.29
PRKAB1-207ENST00000542698 HNRNPA3P51991 378 aaKnown RBP6.97□□□□□ -1.29
PRKAB1-207ENST00000542698 UBE2L3P68036 154 aaKnown RBP6.97□□□□□ -1.29
PRKAB1-207ENST00000542698 PAX5Q02548 391 aa6.97□□□□□ -1.29
PRKAB1-207ENST00000542698 MIC13Q5XKP0 118 aa6.97□□□□□ -1.29
PRKAB1-207ENST00000542698 ABLIM2Q6H8Q1 611 aa6.97□□□□□ -1.29
PRKAB1-207ENST00000542698 TMEM183AQ8IXX5 376 aa6.97□□□□□ -1.29
PRKAB1-207ENST00000542698 IL19Q9UHD0 177 aa6.97□□□□□ -1.29
PRKAB1-207ENST00000542698 PRNDQ9UKY0 176 aa6.97□□□□□ -1.29
PRKAB1-207ENST00000542698 PAM16Q9Y3D7 125 aa6.97□□□□□ -1.29
PRKAB1-207ENST00000542698 RFNGQ9Y644 331 aa6.97□□□□□ -1.29
PRKAB1-207ENST00000542698 CAMPP49913 170 aa6.96□□□□□ -1.29
PRKAB1-207ENST00000542698 GNB1P62873 340 aa6.96□□□□□ -1.29
PRKAB1-207ENST00000542698 VMA21Q3ZAQ7 101 aa6.96□□□□□ -1.29
PRKAB1-207ENST00000542698 SLC24A4Q8NFF2 622 aa6.96□□□□□ -1.29
PRKAB1-207ENST00000542698 OR1L6Q8NGR2 347 aa6.96□□□□□ -1.29
PRKAB1-207ENST00000542698 CDX2Q99626 313 aaPredicted RBP6.96□□□□□ -1.29
PRKAB1-207ENST00000542698 ZNF703Q9H7S9 590 aaPredicted RBP6.96□□□□□ -1.29
PRKAB1-207ENST00000542698 TIMM9Q9Y5J7 89 aa6.96□□□□□ -1.29
PRKAB1-207ENST00000542698 COL4A3Q01955 1670 aa6.96□□□□□ -1.3
PRKAB1-207ENST00000542698 A0A1W2PPE3 182 aa6.96□□□□□ -1.3
PRKAB1-207ENST00000542698 ZNF891A8MT65 544 aaPredicted RBP6.96□□□□□ -1.3
PRKAB1-207ENST00000542698 ETV2O00321 342 aaPredicted RBP6.96□□□□□ -1.3
PRKAB1-207ENST00000542698 CT45A10P0DMU9 189 aa6.96□□□□□ -1.3
PRKAB1-207ENST00000542698 RBPJQ06330 500 aa6.96□□□□□ -1.3
PRKAB1-207ENST00000542698 VN1R17PQ8TDU5 208 aa6.96□□□□□ -1.3
PRKAB1-207ENST00000542698 TMEM171Q8WVE6 324 aa6.96□□□□□ -1.3
PRKAB1-207ENST00000542698 DDA1Q9BW61 102 aa6.96□□□□□ -1.3
PRKAB1-207ENST00000542698 ANAPC10Q9UM13 185 aa6.96□□□□□ -1.3
PRKAB1-207ENST00000542698 MRPS18CQ9Y3D5 142 aaKnown RBP6.96□□□□□ -1.3
PRKAB1-207ENST00000542698 IGHV3OR15-7A0A075B7D8 119 aa6.96□□□□□ -1.3
PRKAB1-207ENST00000542698 C12orf77C9JDV5 145 aa6.96□□□□□ -1.3
PRKAB1-207ENST00000542698 J3QW42 95 aa6.96□□□□□ -1.3
PRKAB1-207ENST00000542698 TMPRSS2O15393 492 aa6.96□□□□□ -1.3
PRKAB1-207ENST00000542698 NDUFB3O43676 98 aa6.96□□□□□ -1.3
PRKAB1-207ENST00000542698 TMEM42Q69YG0 159 aa6.96□□□□□ -1.3
PRKAB1-207ENST00000542698 MRPL54Q6P161 138 aaKnown RBP6.96□□□□□ -1.3
PRKAB1-207ENST00000542698 ARL2-SNX15V9GYD0 113 aa6.96□□□□□ -1.3
PRKAB1-207ENST00000542698 VENTXO95231 258 aa6.95□□□□□ -1.3
PRKAB1-207ENST00000542698 HIST1H1BP16401 226 aaKnown RBP6.95□□□□□ -1.3
PRKAB1-207ENST00000542698 HES1Q14469 280 aa6.95□□□□□ -1.3
PRKAB1-207ENST00000542698 LBHQ53QV2 105 aaPredicted RBP6.95□□□□□ -1.3
PRKAB1-207ENST00000542698 LRRC10Q5BKY1 277 aa6.95□□□□□ -1.3
PRKAB1-207ENST00000542698 SLC35E4Q6ICL7 350 aa6.95□□□□□ -1.3
PRKAB1-207ENST00000542698 BHLHA15Q7RTS1 189 aaPredicted RBP6.95□□□□□ -1.3
PRKAB1-207ENST00000542698 ABHD12Q8N2K0 398 aa6.95□□□□□ -1.3
PRKAB1-207ENST00000542698 GAL3ST2Q9H3Q3 398 aa6.95□□□□□ -1.3
PRKAB1-207ENST00000542698 DEPPQ9NTK1 212 aa6.95□□□□□ -1.3
PRKAB1-207ENST00000542698 IL17BQ9UHF5 180 aa6.95□□□□□ -1.3
PRKAB1-207ENST00000542698 TRAV24A0A0B4J272 114 aa6.95□□□□□ -1.3
PRKAB1-207ENST00000542698 A0A1B0GW64 132 aa6.95□□□□□ -1.3
PRKAB1-207ENST00000542698 M0QZK8 103 aa6.95□□□□□ -1.3
PRKAB1-207ENST00000542698 GGCTO75223 188 aaKnown RBP6.95□□□□□ -1.3
PRKAB1-207ENST00000542698 NAPSAO96009 420 aa6.95□□□□□ -1.3
PRKAB1-207ENST00000542698 SLC25A5P05141 298 aaKnown RBP6.95□□□□□ -1.3
PRKAB1-207ENST00000542698 SSTR5P35346 364 aa6.95□□□□□ -1.3
PRKAB1-207ENST00000542698 PAFAH1B2P68402 229 aa6.95□□□□□ -1.3
PRKAB1-207ENST00000542698 TRIP6Q15654 476 aaKnown RBP6.95□□□□□ -1.3
PRKAB1-207ENST00000542698 NMSQ5H8A3 153 aa6.95□□□□□ -1.3
PRKAB1-207ENST00000542698 SPNS3Q6ZMD2 512 aa6.95□□□□□ -1.3
PRKAB1-207ENST00000542698 REC114Q7Z4M0 266 aa6.95□□□□□ -1.3
PRKAB1-207ENST00000542698 LRP11Q86VZ4 500 aa6.95□□□□□ -1.3
PRKAB1-207ENST00000542698 C1QL4Q86Z23 238 aa6.95□□□□□ -1.3
PRKAB1-207ENST00000542698 VSTM2AQ8TAG5 236 aa6.95□□□□□ -1.3
PRKAB1-207ENST00000542698 CCL17Q92583 94 aa6.95□□□□□ -1.3
PRKAB1-207ENST00000542698 KIAA1671Q9BY89 1806 aa6.95□□□□□ -1.3
PRKAB1-207ENST00000542698 INTS1Q8N201 2190 aaKnown RBP6.95□□□□□ -1.3
PRKAB1-207ENST00000542698 TRAV34A0A0B4J273 112 aa6.95□□□□□ -1.3
PRKAB1-207ENST00000542698 WNT9BO14905 357 aa6.95□□□□□ -1.3
PRKAB1-207ENST00000542698 CXCL1P09341 107 aa6.95□□□□□ -1.3
PRKAB1-207ENST00000542698 ORM2P19652 201 aa6.95□□□□□ -1.3
PRKAB1-207ENST00000542698 RTP5Q14D33 572 aa6.95□□□□□ -1.3
PRKAB1-207ENST00000542698 C10orf91Q5T1B1 145 aa6.95□□□□□ -1.3
PRKAB1-207ENST00000542698 WDR87Q6ZQQ6 2873 aa6.95□□□□□ -1.3
PRKAB1-207ENST00000542698 C5orf24Q7Z6I8 188 aa6.95□□□□□ -1.3
PRKAB1-207ENST00000542698 OR1L4Q8NGR5 311 aa6.95□□□□□ -1.3
PRKAB1-207ENST00000542698 ZDHHC16Q969W1 377 aa6.95□□□□□ -1.3
PRKAB1-207ENST00000542698 RNF2Q99496 336 aa6.95□□□□□ -1.3
PRKAB1-207ENST00000542698 NPCDR1Q9BY65 106 aa6.95□□□□□ -1.3
PRKAB1-207ENST00000542698 RNF7Q9UBF6 113 aa6.95□□□□□ -1.3
PRKAB1-207ENST00000542698 ZDHHC8Q9ULC8 765 aa6.95□□□□□ -1.3
PRKAB1-207ENST00000542698 C17orf98A8MV24 154 aa6.94□□□□□ -1.3
PRKAB1-207ENST00000542698 K7ESF4 209 aa6.94□□□□□ -1.3
PRKAB1-207ENST00000542698 ARL14EPLP0DKL9 152 aa6.94□□□□□ -1.3
PRKAB1-207ENST00000542698 ZNF25P17030 456 aaPredicted RBP6.94□□□□□ -1.3
PRKAB1-207ENST00000542698 SLC35B1P78383 322 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms