RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 GDPD1Q8N9F7 314 aa5.89□□□□□ -1.47
MSH6-209ENST00000538136 ZNF107Q9UII5 783 aaPredicted RBP5.89□□□□□ -1.47
MSH6-209ENST00000538136 IFNL4K9M1U5 179 aa5.89□□□□□ -1.47
MSH6-209ENST00000538136 FCN1O00602 326 aa5.89□□□□□ -1.47
MSH6-209ENST00000538136 RP2O75695 350 aa5.89□□□□□ -1.47
MSH6-209ENST00000538136 HSPB1P04792 205 aaKnown RBP5.89□□□□□ -1.47
MSH6-209ENST00000538136 FSTP19883 344 aa5.89□□□□□ -1.47
MSH6-209ENST00000538136 PRTN3P24158 256 aa5.89□□□□□ -1.47
MSH6-209ENST00000538136 KCNJ3P48549 501 aa5.89□□□□□ -1.47
MSH6-209ENST00000538136 GAMTQ14353 236 aa5.89□□□□□ -1.47
MSH6-209ENST00000538136 TATDN3Q17R31 274 aa5.89□□□□□ -1.47
MSH6-209ENST00000538136 INO80EQ8NBZ0 244 aaPredicted RBP5.89□□□□□ -1.47
MSH6-209ENST00000538136 OR10W1Q8NGF6 305 aa5.89□□□□□ -1.47
MSH6-209ENST00000538136 OR2T10Q8NGZ9 312 aa5.89□□□□□ -1.47
MSH6-209ENST00000538136 OR4S2Q8NH73 311 aa5.89□□□□□ -1.47
MSH6-209ENST00000538136 ZNF471Q9BX82 626 aaPredicted RBP5.89□□□□□ -1.47
MSH6-209ENST00000538136 MTFP1Q9UDX5 166 aa5.89□□□□□ -1.47
MSH6-209ENST00000538136 C3orf85A0A1B0GTC6 90 aa5.89□□□□□ -1.47
MSH6-209ENST00000538136 ZNF737O75373 536 aa5.89□□□□□ -1.47
MSH6-209ENST00000538136 RPL27AP46776 148 aaKnown RBP5.89□□□□□ -1.47
MSH6-209ENST00000538136 EIF2B2P49770 351 aaKnown RBP5.89□□□□□ -1.47
MSH6-209ENST00000538136 ZNF134P52741 427 aa5.89□□□□□ -1.47
MSH6-209ENST00000538136 LRRC75BQ2VPJ9 315 aa5.89□□□□□ -1.47
MSH6-209ENST00000538136 HEPN1Q6WQI6 88 aa5.89□□□□□ -1.47
MSH6-209ENST00000538136 PIP4P2Q8N4L2 257 aa5.89□□□□□ -1.47
MSH6-209ENST00000538136 KLHL30-AS1Q8NEE0 82 aa5.89□□□□□ -1.47
MSH6-209ENST00000538136 SMIM4Q8WVI0 70 aa5.89□□□□□ -1.47
MSH6-209ENST00000538136 PRSS22Q9GZN4 317 aa5.89□□□□□ -1.47
MSH6-209ENST00000538136 LIN7CQ9NUP9 197 aaKnown RBP5.89□□□□□ -1.47
MSH6-209ENST00000538136 SDHAF2Q9NX18 166 aa5.89□□□□□ -1.47
MSH6-209ENST00000538136 WASHC3Q9Y3C0 194 aa5.89□□□□□ -1.47
MSH6-209ENST00000538136 HRNRQ86YZ3 2850 aaPredicted RBP5.89□□□□□ -1.47
MSH6-209ENST00000538136 F5H0A9 414 aaPredicted RBP5.89□□□□□ -1.47
MSH6-209ENST00000538136 SRSF10O75494 262 aaKnown RBP5.89□□□□□ -1.47
MSH6-209ENST00000538136 IGFBP3P17936 291 aaPredicted RBP5.89□□□□□ -1.47
MSH6-209ENST00000538136 ZNF146Q15072 292 aa5.89□□□□□ -1.47
MSH6-209ENST00000538136 TMEM155Q4W5P6 130 aa5.89□□□□□ -1.47
MSH6-209ENST00000538136 PDLIM3Q53GG5 364 aaPredicted RBP5.89□□□□□ -1.47
MSH6-209ENST00000538136 TMEM42Q69YG0 159 aa5.89□□□□□ -1.47
MSH6-209ENST00000538136 Q6P435 159 aa5.89□□□□□ -1.47
MSH6-209ENST00000538136 LGI3Q8N145 548 aa5.89□□□□□ -1.47
MSH6-209ENST00000538136 DYNLRB2Q8TF09 96 aa5.89□□□□□ -1.47
MSH6-209ENST00000538136 CHPT1Q8WUD6 406 aa5.89□□□□□ -1.47
MSH6-209ENST00000538136 TMEM204Q9BSN7 226 aa5.89□□□□□ -1.47
MSH6-209ENST00000538136 TXNL1O43396 289 aa5.88□□□□□ -1.47
MSH6-209ENST00000538136 GNG7O60262 68 aa5.88□□□□□ -1.47
MSH6-209ENST00000538136 CCL1P22362 96 aa5.88□□□□□ -1.47
MSH6-209ENST00000538136 NKX2-1P43699 371 aaPredicted RBP5.88□□□□□ -1.47
MSH6-209ENST00000538136 SLC35B1P78383 322 aa5.88□□□□□ -1.47
MSH6-209ENST00000538136 BAXQ07812 192 aa5.88□□□□□ -1.47
MSH6-209ENST00000538136 C10orf99Q6UWK7 81 aa5.88□□□□□ -1.47
MSH6-209ENST00000538136 MOB1BQ7L9L4 216 aa5.88□□□□□ -1.47
MSH6-209ENST00000538136 OR4A4PQ8NGN8 299 aa5.88□□□□□ -1.47
MSH6-209ENST00000538136 CCDC59Q9P031 241 aaKnown RBP5.88□□□□□ -1.47
MSH6-209ENST00000538136 MFNGO00587 321 aa5.88□□□□□ -1.47
MSH6-209ENST00000538136 CA2P00918 260 aa5.88□□□□□ -1.47
MSH6-209ENST00000538136 GPR183P32249 361 aa5.88□□□□□ -1.47
MSH6-209ENST00000538136 HLA-DRB5Q30154 266 aa5.88□□□□□ -1.47
MSH6-209ENST00000538136 LPCAT3Q6P1A2 487 aa5.88□□□□□ -1.47
MSH6-209ENST00000538136 CLEC19AQ6UXS0 136 aa5.88□□□□□ -1.47
MSH6-209ENST00000538136 ZNF485Q8NCK3 441 aa5.88□□□□□ -1.47
MSH6-209ENST00000538136 OR4X2Q8NGF9 303 aa5.88□□□□□ -1.47
MSH6-209ENST00000538136 SCGB1C1Q8TD33 95 aa5.88□□□□□ -1.47
MSH6-209ENST00000538136 OR4C12Q96R67 309 aa5.88□□□□□ -1.47
MSH6-209ENST00000538136 C20orf85Q9H1P6 137 aa5.88□□□□□ -1.47
MSH6-209ENST00000538136 PLSCR3Q9NRY6 295 aa5.88□□□□□ -1.47
MSH6-209ENST00000538136 A0A1B0GVG6 124 aa5.88□□□□□ -1.47
MSH6-209ENST00000538136 CLEC18AA5D8T8 446 aa5.88□□□□□ -1.47
MSH6-209ENST00000538136 GPR137BO60478 399 aa5.88□□□□□ -1.47
MSH6-209ENST00000538136 MDKP21741 143 aaPredicted RBP5.88□□□□□ -1.47
MSH6-209ENST00000538136 F2RP25116 425 aa5.88□□□□□ -1.47
MSH6-209ENST00000538136 C11orf71Q6IPW1 123 aa5.88□□□□□ -1.47
MSH6-209ENST00000538136 CLEC18CQ8NCF0 446 aa5.88□□□□□ -1.47
MSH6-209ENST00000538136 BEND2Q8NDZ0 799 aa5.88□□□□□ -1.47
MSH6-209ENST00000538136 OR5AU1Q8NGC0 362 aa5.88□□□□□ -1.47
MSH6-209ENST00000538136 JMJD8Q96S16 334 aa5.88□□□□□ -1.47
MSH6-209ENST00000538136 TBX15Q96SF7 602 aa5.88□□□□□ -1.47
MSH6-209ENST00000538136 TSNAXQ99598 290 aaKnown RBP5.88□□□□□ -1.47
MSH6-209ENST00000538136 TPSG1Q9NRR2 321 aa5.88□□□□□ -1.47
MSH6-209ENST00000538136 RNF114Q9Y508 228 aa5.88□□□□□ -1.47
MSH6-209ENST00000538136 TIMM8BQ9Y5J9 83 aaPredicted RBP5.88□□□□□ -1.47
MSH6-209ENST00000538136 TRAV3A0A0B4J244 114 aa5.87□□□□□ -1.47
MSH6-209ENST00000538136 IGHV1-3A0A0C4DH29 117 aa5.87□□□□□ -1.47
MSH6-209ENST00000538136 DNASE2O00115 360 aaPredicted RBP5.87□□□□□ -1.47
MSH6-209ENST00000538136 SSX5O60225 188 aa5.87□□□□□ -1.47
MSH6-209ENST00000538136 UPK1BO75841 260 aa5.87□□□□□ -1.47
MSH6-209ENST00000538136 NQO2P16083 231 aa5.87□□□□□ -1.47
MSH6-209ENST00000538136 IGFBP2P18065 325 aa5.87□□□□□ -1.47
MSH6-209ENST00000538136 RPL30P62888 115 aaKnown RBP5.87□□□□□ -1.47
MSH6-209ENST00000538136 HTD2P86397 168 aa5.87□□□□□ -1.47
MSH6-209ENST00000538136 ZNF497Q6ZNH5 498 aa5.87□□□□□ -1.47
MSH6-209ENST00000538136 FBLIM1Q8WUP2 373 aa5.87□□□□□ -1.47
MSH6-209ENST00000538136 BUB1B-PAK6H3BSN5 160 aa5.87□□□□□ -1.47
MSH6-209ENST00000538136 ATG12O94817 140 aa5.87□□□□□ -1.47
MSH6-209ENST00000538136 OR4E1P0C645 316 aa5.87□□□□□ -1.47
MSH6-209ENST00000538136 OR8U8P0C7N1 319 aa5.87□□□□□ -1.47
MSH6-209ENST00000538136 LYZP61626 148 aa5.87□□□□□ -1.47
MSH6-209ENST00000538136 PNLIPRP3Q17RR3 467 aa5.87□□□□□ -1.47
MSH6-209ENST00000538136 C3orf36Q3SXR2 165 aa5.87□□□□□ -1.47
MSH6-209ENST00000538136 ATPAF1Q5TC12 328 aaPredicted RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms