RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 BCL3P20749 454 aa6.57□□□□□ -1.36
CPSF7-216ENST00000536548 OR3A1P47881 315 aa6.57□□□□□ -1.36
CPSF7-216ENST00000536548 TNFSF10P50591 281 aa6.57□□□□□ -1.36
CPSF7-216ENST00000536548 RAC3P60763 192 aa6.57□□□□□ -1.36
CPSF7-216ENST00000536548 RPL19P84098 196 aaKnown RBP6.57□□□□□ -1.36
CPSF7-216ENST00000536548 PSG4Q00888 419 aa6.57□□□□□ -1.36
CPSF7-216ENST00000536548 FOXL1Q12952 345 aa6.57□□□□□ -1.36
CPSF7-216ENST00000536548 SPANXN5Q5MJ07 72 aa6.57□□□□□ -1.36
CPSF7-216ENST00000536548 ZNF324BQ6AW86 544 aaPredicted RBP6.57□□□□□ -1.36
CPSF7-216ENST00000536548 TEX38Q6PEX7 206 aa6.57□□□□□ -1.36
CPSF7-216ENST00000536548 TMEM14EPQ6UXP3 125 aa6.57□□□□□ -1.36
CPSF7-216ENST00000536548 ZNF705AQ6ZN79 300 aaPredicted RBP6.57□□□□□ -1.36
CPSF7-216ENST00000536548 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.57□□□□□ -1.36
CPSF7-216ENST00000536548 ZDHHC23Q8IYP9 409 aa6.57□□□□□ -1.36
CPSF7-216ENST00000536548 OR10G9Q8NGN4 311 aa6.57□□□□□ -1.36
CPSF7-216ENST00000536548 OR10G7Q8NGN6 311 aa6.57□□□□□ -1.36
CPSF7-216ENST00000536548 SPATA3Q8NHX4 192 aa6.57□□□□□ -1.36
CPSF7-216ENST00000536548 CMTM2Q8TAZ6 248 aa6.57□□□□□ -1.36
CPSF7-216ENST00000536548 CIB3Q96Q77 187 aaPredicted RBP6.57□□□□□ -1.36
CPSF7-216ENST00000536548 FOXB1Q99853 325 aa6.57□□□□□ -1.36
CPSF7-216ENST00000536548 MIEN1Q9BRT3 115 aa6.57□□□□□ -1.36
CPSF7-216ENST00000536548 C1QTNF5Q9BXJ0 243 aa6.57□□□□□ -1.36
CPSF7-216ENST00000536548 WNT5BQ9H1J7 359 aa6.57□□□□□ -1.36
CPSF7-216ENST00000536548 CBLN4Q9NTU7 201 aa6.57□□□□□ -1.36
CPSF7-216ENST00000536548 RARRES3Q9UL19 164 aa6.57□□□□□ -1.36
CPSF7-216ENST00000536548 POLR3KQ9Y2Y1 108 aaPredicted RBP6.57□□□□□ -1.36
CPSF7-216ENST00000536548 CHCHD2Q9Y6H1 151 aaPredicted RBP6.57□□□□□ -1.36
CPSF7-216ENST00000536548 PXMP4Q9Y6I8 212 aa6.57□□□□□ -1.36
CPSF7-216ENST00000536548 IGHV3-15A0A0B4J1V0 119 aa6.56□□□□□ -1.36
CPSF7-216ENST00000536548 MLNRO43193 412 aa6.56□□□□□ -1.36
CPSF7-216ENST00000536548 TNFSF12O43508 249 aa6.56□□□□□ -1.36
CPSF7-216ENST00000536548 SCRG1O75711 98 aa6.56□□□□□ -1.36
CPSF7-216ENST00000536548 SYNGR4O95473 234 aa6.56□□□□□ -1.36
CPSF7-216ENST00000536548 KRASP01116 189 aa6.56□□□□□ -1.36
CPSF7-216ENST00000536548 IL3RAP26951 378 aa6.56□□□□□ -1.36
CPSF7-216ENST00000536548 RPL15P61313 204 aaKnown RBP6.56□□□□□ -1.36
CPSF7-216ENST00000536548 ARL16Q0P5N6 197 aa6.56□□□□□ -1.36
CPSF7-216ENST00000536548 PDCD1Q15116 288 aa6.56□□□□□ -1.36
CPSF7-216ENST00000536548 TMEM249Q2WGJ8 235 aa6.56□□□□□ -1.36
CPSF7-216ENST00000536548 CEACAM21Q3KPI0 293 aa6.56□□□□□ -1.36
CPSF7-216ENST00000536548 FFAR4Q5NUL3 377 aa6.56□□□□□ -1.36
CPSF7-216ENST00000536548 FAM78BQ5VT40 261 aa6.56□□□□□ -1.36
CPSF7-216ENST00000536548 PRAMEF20Q5VT98 475 aa6.56□□□□□ -1.36
CPSF7-216ENST00000536548 C6orf15Q6UXA7 325 aaPredicted RBP6.56□□□□□ -1.36
CPSF7-216ENST00000536548 SSX7Q7RTT5 188 aa6.56□□□□□ -1.36
CPSF7-216ENST00000536548 MRPL21Q7Z2W9 205 aaKnown RBP6.56□□□□□ -1.36
CPSF7-216ENST00000536548 NUFIP2Q7Z417 695 aaKnown RBP6.56□□□□□ -1.36
CPSF7-216ENST00000536548 HAPLN4Q86UW8 402 aa6.56□□□□□ -1.36
CPSF7-216ENST00000536548 CALHM1Q8IU99 346 aa6.56□□□□□ -1.36
CPSF7-216ENST00000536548 C17orf78Q8N4C9 275 aa6.56□□□□□ -1.36
CPSF7-216ENST00000536548 RPP25LQ8N5L8 163 aaKnown RBP6.56□□□□□ -1.36
CPSF7-216ENST00000536548 ZBTB34Q8NCN2 500 aa6.56□□□□□ -1.36
CPSF7-216ENST00000536548 ST6GALNAC3Q8NDV1 305 aa6.56□□□□□ -1.36
CPSF7-216ENST00000536548 OR5A2Q8NGI9 324 aa6.56□□□□□ -1.36
CPSF7-216ENST00000536548 OR51H1Q8NH63 302 aa6.56□□□□□ -1.36
CPSF7-216ENST00000536548 ITLN2Q8WWU7 325 aaPredicted RBP6.56□□□□□ -1.36
CPSF7-216ENST00000536548 TBX15Q96SF7 602 aa6.56□□□□□ -1.36
CPSF7-216ENST00000536548 ZPBPQ9BS86 351 aa6.56□□□□□ -1.36
CPSF7-216ENST00000536548 ATG101Q9BSB4 218 aa6.56□□□□□ -1.36
CPSF7-216ENST00000536548 AKIRIN1Q9H9L7 192 aaPredicted RBP6.56□□□□□ -1.36
CPSF7-216ENST00000536548 KCNIP2Q9NS61 270 aa6.56□□□□□ -1.36
CPSF7-216ENST00000536548 MXRA5Q9NR99 2828 aa6.56□□□□□ -1.36
CPSF7-216ENST00000536548 IGKV1-6A0A0C4DH72 117 aa6.55□□□□□ -1.36
CPSF7-216ENST00000536548 A0A0J9YW62 118 aa6.55□□□□□ -1.36
CPSF7-216ENST00000536548 OR5B21A6NL26 309 aa6.55□□□□□ -1.36
CPSF7-216ENST00000536548 C19orf84I3L1E1 186 aa6.55□□□□□ -1.36
CPSF7-216ENST00000536548 CBR3O75828 277 aa6.55□□□□□ -1.36
CPSF7-216ENST00000536548 CEACAM4O75871 244 aa6.55□□□□□ -1.36
CPSF7-216ENST00000536548 HPRT1P00492 218 aa6.55□□□□□ -1.36
CPSF7-216ENST00000536548 ESDP10768 282 aa6.55□□□□□ -1.36
CPSF7-216ENST00000536548 EDN3P14138 238 aa6.55□□□□□ -1.36
CPSF7-216ENST00000536548 B4GALT1P15291 398 aa6.55□□□□□ -1.36
CPSF7-216ENST00000536548 RPL29P47914 159 aaKnown RBP6.55□□□□□ -1.36
CPSF7-216ENST00000536548 CDC34P49427 236 aaPredicted RBP6.55□□□□□ -1.36
CPSF7-216ENST00000536548 SSR4P51571 173 aa6.55□□□□□ -1.36
CPSF7-216ENST00000536548 YPEL3P61236 119 aaPredicted RBP6.55□□□□□ -1.36
CPSF7-216ENST00000536548 SELENOTP62341 195 aa6.55□□□□□ -1.36
CPSF7-216ENST00000536548 COX19Q49B96 90 aa6.55□□□□□ -1.36
CPSF7-216ENST00000536548 COLCA1Q6ZS62 124 aa6.55□□□□□ -1.36
CPSF7-216ENST00000536548 TMEM144Q7Z5S9 345 aa6.55□□□□□ -1.36
CPSF7-216ENST00000536548 TCTEX1D1Q8N7M0 179 aa6.55□□□□□ -1.36
CPSF7-216ENST00000536548 OR10P1Q8NGE3 313 aa6.55□□□□□ -1.36
CPSF7-216ENST00000536548 CT55Q8WUE5 264 aa6.55□□□□□ -1.36
CPSF7-216ENST00000536548 UCN2Q96RP3 112 aa6.55□□□□□ -1.36
CPSF7-216ENST00000536548 DIRC2Q96SL1 478 aa6.55□□□□□ -1.36
CPSF7-216ENST00000536548 SMR3AQ99954 134 aa6.55□□□□□ -1.36
CPSF7-216ENST00000536548 TMEM208Q9BTX3 173 aa6.55□□□□□ -1.36
CPSF7-216ENST00000536548 VAMP8Q9BV40 100 aa6.55□□□□□ -1.36
CPSF7-216ENST00000536548 ELOVL1Q9BW60 279 aa6.55□□□□□ -1.36
CPSF7-216ENST00000536548 OR51B6Q9H340 312 aa6.55□□□□□ -1.36
CPSF7-216ENST00000536548 SLC25A22Q9H936 323 aa6.55□□□□□ -1.36
CPSF7-216ENST00000536548 GPR35Q9HC97 309 aa6.55□□□□□ -1.36
CPSF7-216ENST00000536548 TMEM106BQ9NUM4 274 aa6.55□□□□□ -1.36
CPSF7-216ENST00000536548 RBM7Q9Y580 266 aaKnown RBP6.55□□□□□ -1.36
CPSF7-216ENST00000536548 LOC102723996A0A087X1L8 192 aa6.54□□□□□ -1.36
CPSF7-216ENST00000536548 TRBV9A0A0B4J1U6 114 aa6.54□□□□□ -1.36
CPSF7-216ENST00000536548 ZNF716A6NP11 495 aa6.54□□□□□ -1.36
CPSF7-216ENST00000536548 C11orf94C9JXX5 98 aa6.54□□□□□ -1.36
CPSF7-216ENST00000536548 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.54□□□□□ -1.36
CPSF7-216ENST00000536548 ZIC3O60481 467 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms