RNA–Protein interactions for RNA: ENST00000520579.5

PDGFRB-207, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 1 (best)

Gene PDGFRB, Length 3,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-207ENST00000520579 RND2P52198 227 aa8.6□□□□□ -1.03
PDGFRB-207ENST00000520579 SLC38A11Q08AI6 406 aa8.6□□□□□ -1.03
PDGFRB-207ENST00000520579 FAM53AQ6NSI3 398 aaPredicted RBP8.6□□□□□ -1.03
PDGFRB-207ENST00000520579 MRGPRGQ86SM5 289 aa8.6□□□□□ -1.03
PDGFRB-207ENST00000520579 MUC15Q8N387 334 aa8.6□□□□□ -1.03
PDGFRB-207ENST00000520579 AKIRIN1Q9H9L7 192 aaPredicted RBP8.6□□□□□ -1.03
PDGFRB-207ENST00000520579 DMDP11532 3685 aa8.6□□□□□ -1.03
PDGFRB-207ENST00000520579 A4D1N5 150 aa8.6□□□□□ -1.03
PDGFRB-207ENST00000520579 TCN2P20062 427 aa8.6□□□□□ -1.03
PDGFRB-207ENST00000520579 OR1D5P58170 312 aa8.6□□□□□ -1.03
PDGFRB-207ENST00000520579 WDR82Q6UXN9 313 aa8.6□□□□□ -1.03
PDGFRB-207ENST00000520579 NAA38Q9BRA0 125 aaKnown RBP8.6□□□□□ -1.03
PDGFRB-207ENST00000520579 GPR27Q9NS67 375 aa8.6□□□□□ -1.03
PDGFRB-207ENST00000520579 RALYQ9UKM9 306 aaKnown RBP8.6□□□□□ -1.03
PDGFRB-207ENST00000520579 RNF114Q9Y508 228 aa8.6□□□□□ -1.03
PDGFRB-207ENST00000520579 ARFGEF3Q5TH69 2177 aa8.6□□□□□ -1.03
PDGFRB-207ENST00000520579 KBTBD11O94819 623 aa8.59□□□□□ -1.03
PDGFRB-207ENST00000520579 TFF3Q07654 80 aa8.59□□□□□ -1.03
PDGFRB-207ENST00000520579 MSMO1Q15800 293 aa8.59□□□□□ -1.03
PDGFRB-207ENST00000520579 MRPL54Q6P161 138 aaKnown RBP8.59□□□□□ -1.03
PDGFRB-207ENST00000520579 ZNF611Q8N823 705 aa8.59□□□□□ -1.03
PDGFRB-207ENST00000520579 A0A096LPE4 126 aa8.59□□□□□ -1.03
PDGFRB-207ENST00000520579 A0A1W2PPZ6 126 aa8.59□□□□□ -1.03
PDGFRB-207ENST00000520579 OR6C6A6NF89 314 aa8.59□□□□□ -1.03
PDGFRB-207ENST00000520579 ZNF732B4DXR9 585 aa8.59□□□□□ -1.03
PDGFRB-207ENST00000520579 M0R1X1 148 aa8.59□□□□□ -1.03
PDGFRB-207ENST00000520579 NUDT3O95989 172 aa8.59□□□□□ -1.03
PDGFRB-207ENST00000520579 VDAC1P21796 283 aa8.59□□□□□ -1.03
PDGFRB-207ENST00000520579 GPM6AP51674 278 aa8.59□□□□□ -1.03
PDGFRB-207ENST00000520579 LINC00205P59089 165 aa8.59□□□□□ -1.03
PDGFRB-207ENST00000520579 ACSM6Q6P461 480 aa8.59□□□□□ -1.03
PDGFRB-207ENST00000520579 OBP2AQ9NY56 170 aa8.59□□□□□ -1.03
PDGFRB-207ENST00000520579 B5MCH6 92 aa8.59□□□□□ -1.03
PDGFRB-207ENST00000520579 G3V4G9 280 aa8.59□□□□□ -1.03
PDGFRB-207ENST00000520579 PRB4P10163 310 aaPredicted RBP8.59□□□□□ -1.03
PDGFRB-207ENST00000520579 TSPOP30536 169 aa8.59□□□□□ -1.03
PDGFRB-207ENST00000520579 PAX9P55771 341 aa8.59□□□□□ -1.03
PDGFRB-207ENST00000520579 RELBQ01201 579 aa8.59□□□□□ -1.03
PDGFRB-207ENST00000520579 FXYD3Q14802 87 aa8.59□□□□□ -1.03
PDGFRB-207ENST00000520579 BHLHA15Q7RTS1 189 aaPredicted RBP8.59□□□□□ -1.03
PDGFRB-207ENST00000520579 UHRF2Q96PU4 802 aa8.59□□□□□ -1.03
PDGFRB-207ENST00000520579 RASL10BQ96S79 203 aa8.59□□□□□ -1.03
PDGFRB-207ENST00000520579 GCM1Q9NP62 436 aa8.59□□□□□ -1.03
PDGFRB-207ENST00000520579 RNF115Q9Y4L5 304 aa8.59□□□□□ -1.03
PDGFRB-207ENST00000520579 DUXBA0A1W2PPF3 345 aa8.58□□□□□ -1.04
PDGFRB-207ENST00000520579 SNURFLB1AK76 121 aa8.58□□□□□ -1.04
PDGFRB-207ENST00000520579 SYNGR2O43760 224 aa8.58□□□□□ -1.04
PDGFRB-207ENST00000520579 BCL3P20749 454 aa8.58□□□□□ -1.04
PDGFRB-207ENST00000520579 ECI1P42126 302 aa8.58□□□□□ -1.04
PDGFRB-207ENST00000520579 PSG9Q00887 426 aa8.58□□□□□ -1.04
PDGFRB-207ENST00000520579 C5orf64Q2M2E5 130 aa8.58□□□□□ -1.04
PDGFRB-207ENST00000520579 TMEM92Q6UXU6 159 aa8.58□□□□□ -1.04
PDGFRB-207ENST00000520579 Q6ZPA2 131 aa8.58□□□□□ -1.04
PDGFRB-207ENST00000520579 WDR5BQ86VZ2 330 aa8.58□□□□□ -1.04
PDGFRB-207ENST00000520579 GJC3Q8NFK1 279 aa8.58□□□□□ -1.04
PDGFRB-207ENST00000520579 GABRG3Q99928 467 aa8.58□□□□□ -1.04
PDGFRB-207ENST00000520579 NRN1Q9NPD7 142 aa8.58□□□□□ -1.04
PDGFRB-207ENST00000520579 TAAR3PQ9P1P4 343 aa8.58□□□□□ -1.04
PDGFRB-207ENST00000520579 OR1A1Q9P1Q5 309 aa8.58□□□□□ -1.04
PDGFRB-207ENST00000520579 SLC22A20A6NK97 555 aa8.58□□□□□ -1.04
PDGFRB-207ENST00000520579 FAM166BA8MTA8 275 aa8.58□□□□□ -1.04
PDGFRB-207ENST00000520579 MPV17L2Q567V2 206 aa8.58□□□□□ -1.04
PDGFRB-207ENST00000520579 Q56UQ5 140 aa8.58□□□□□ -1.04
PDGFRB-207ENST00000520579 C9orf50Q5SZB4 431 aa8.58□□□□□ -1.04
PDGFRB-207ENST00000520579 OR5P3Q8WZ94 311 aa8.58□□□□□ -1.04
PDGFRB-207ENST00000520579 SPXQ9BT56 116 aa8.58□□□□□ -1.04
PDGFRB-207ENST00000520579 MCRIP2Q9BUT9 160 aaKnown RBP8.58□□□□□ -1.04
PDGFRB-207ENST00000520579 ALKBH4Q9NXW9 302 aa8.58□□□□□ -1.04
PDGFRB-207ENST00000520579 OBSL1O75147 1896 aa8.58□□□□□ -1.04
PDGFRB-207ENST00000520579 PDCD6O75340 191 aa8.58□□□□□ -1.04
PDGFRB-207ENST00000520579 HOXA4Q00056 320 aaPredicted RBP8.58□□□□□ -1.04
PDGFRB-207ENST00000520579 CYP2G1PQ6ZSU1 146 aa8.58□□□□□ -1.04
PDGFRB-207ENST00000520579 SPTSSAQ969W0 71 aa8.58□□□□□ -1.04
PDGFRB-207ENST00000520579 SMDT1Q9H4I9 107 aa8.58□□□□□ -1.04
PDGFRB-207ENST00000520579 NGBQ9NPG2 151 aa8.58□□□□□ -1.04
PDGFRB-207ENST00000520579 UFC1Q9Y3C8 167 aa8.58□□□□□ -1.04
PDGFRB-207ENST00000520579 PTRH2Q9Y3E5 179 aaKnown RBP8.58□□□□□ -1.04
PDGFRB-207ENST00000520579 ATP23Q9Y6H3 246 aa8.58□□□□□ -1.04
PDGFRB-207ENST00000520579 PPIAL4CA0A0B4J2A2 164 aa8.57□□□□□ -1.04
PDGFRB-207ENST00000520579 LOC102725191A0A1B0GVB3 256 aa8.57□□□□□ -1.04
PDGFRB-207ENST00000520579 SNAI2O43623 268 aa8.57□□□□□ -1.04
PDGFRB-207ENST00000520579 PPIAL4GP0DN37 164 aa8.57□□□□□ -1.04
PDGFRB-207ENST00000520579 IGLC2P0DOY2 106 aa8.57□□□□□ -1.04
PDGFRB-207ENST00000520579 IGLC3P0DOY3 106 aa8.57□□□□□ -1.04
PDGFRB-207ENST00000520579 GRB2P62993 217 aaKnown RBP8.57□□□□□ -1.04
PDGFRB-207ENST00000520579 CCDC144NLQ6NUI1 221 aa8.57□□□□□ -1.04
PDGFRB-207ENST00000520579 OR2M7Q8NG81 312 aa8.57□□□□□ -1.04
PDGFRB-207ENST00000520579 NEIL1Q96FI4 390 aaPredicted RBP8.57□□□□□ -1.04
PDGFRB-207ENST00000520579 SIGLEC12Q96PQ1 595 aa8.57□□□□□ -1.04
PDGFRB-207ENST00000520579 PHF7Q9BWX1 381 aaPredicted RBP8.57□□□□□ -1.04
PDGFRB-207ENST00000520579 NAT8BQ9UHF3 227 aa8.57□□□□□ -1.04
PDGFRB-207ENST00000520579 OR51B2Q9Y5P1 312 aa8.57□□□□□ -1.04
PDGFRB-207ENST00000520579 A0A1W2PPV4 95 aa8.57□□□□□ -1.04
PDGFRB-207ENST00000520579 A0A1W2PQF6 199 aa8.57□□□□□ -1.04
PDGFRB-207ENST00000520579 ZNF716A6NP11 495 aa8.57□□□□□ -1.04
PDGFRB-207ENST00000520579 APOA2P02652 100 aa8.57□□□□□ -1.04
PDGFRB-207ENST00000520579 CELA2AP08217 269 aa8.57□□□□□ -1.04
PDGFRB-207ENST00000520579 SLC25A6P12236 298 aa8.57□□□□□ -1.04
PDGFRB-207ENST00000520579 HBG1P69891 147 aa8.57□□□□□ -1.04
PDGFRB-207ENST00000520579 HBG2P69892 147 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms