RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 C15orf41Q9Y2V0 281 aa1.52□□□□□ -2.17
SQLE-202ENST00000518604 SLX4Q8IY92 1834 aa1.52□□□□□ -2.17
SQLE-202ENST00000518604 CETN3O15182 167 aa1.51□□□□□ -2.17
SQLE-202ENST00000518604 IDH3GP51553 393 aaPredicted RBP1.51□□□□□ -2.17
SQLE-202ENST00000518604 UBE2G2P60604 165 aa1.51□□□□□ -2.17
SQLE-202ENST00000518604 CXCR4P61073 352 aa1.51□□□□□ -2.17
SQLE-202ENST00000518604 SKP1P63208 163 aa1.51□□□□□ -2.17
SQLE-202ENST00000518604 MED21Q13503 144 aa1.51□□□□□ -2.17
SQLE-202ENST00000518604 SPATA12Q7Z6I5 190 aa1.51□□□□□ -2.17
SQLE-202ENST00000518604 C10orf126Q8N4M7 172 aa1.51□□□□□ -2.17
SQLE-202ENST00000518604 DEFB119Q8N690 84 aa1.51□□□□□ -2.17
SQLE-202ENST00000518604 JOSD2Q8TAC2 188 aa1.51□□□□□ -2.17
SQLE-202ENST00000518604 ZNF625Q96I27 306 aaPredicted RBP1.51□□□□□ -2.17
SQLE-202ENST00000518604 ANKRD36BP1Q96IX9 119 aa1.51□□□□□ -2.17
SQLE-202ENST00000518604 HHLA3Q9XRX5 114 aa1.51□□□□□ -2.17
SQLE-202ENST00000518604 POLR3HQ9Y535 204 aaPredicted RBP1.51□□□□□ -2.17
SQLE-202ENST00000518604 REREQ9P2R6 1566 aa1.51□□□□□ -2.17
SQLE-202ENST00000518604 GBF1Q92538 1859 aa1.5□□□□□ -2.17
SQLE-202ENST00000518604 A0A087WUU8 490 aa1.5□□□□□ -2.17
SQLE-202ENST00000518604 MDFIC2A0A1B0GVS7 189 aa1.5□□□□□ -2.17
SQLE-202ENST00000518604 A0A1B0GW54 56 aa1.5□□□□□ -2.17
SQLE-202ENST00000518604 ITGB1BP1O14713 200 aa1.5□□□□□ -2.17
SQLE-202ENST00000518604 CTBP2P56545 445 aa1.5□□□□□ -2.17
SQLE-202ENST00000518604 TMEM251Q8N6I4 163 aa1.5□□□□□ -2.17
SQLE-202ENST00000518604 C12orf43Q96C57 262 aaKnown RBP1.5□□□□□ -2.17
SQLE-202ENST00000518604 ZNHIT6Q9NWK9 470 aaKnown RBP1.5□□□□□ -2.17
SQLE-202ENST00000518604 DOK5Q9P104 306 aa1.5□□□□□ -2.17
SQLE-202ENST00000518604 MPDZO75970 2070 aa1.5□□□□□ -2.17
SQLE-202ENST00000518604 IGHV3-64A0A075B6Q5 118 aa1.49□□□□□ -2.17
SQLE-202ENST00000518604 C9JCJ5 164 aa1.49□□□□□ -2.17
SQLE-202ENST00000518604 TXNDC9O14530 226 aa1.49□□□□□ -2.17
SQLE-202ENST00000518604 HLA-DQB2P05538 268 aa1.49□□□□□ -2.17
SQLE-202ENST00000518604 UGT2B7P16662 529 aa1.49□□□□□ -2.17
SQLE-202ENST00000518604 CDC34P49427 236 aaPredicted RBP1.49□□□□□ -2.17
SQLE-202ENST00000518604 EMP1P54849 157 aa1.49□□□□□ -2.17
SQLE-202ENST00000518604 TAS2R20P59543 309 aa1.49□□□□□ -2.17
SQLE-202ENST00000518604 GLO1Q04760 184 aa1.49□□□□□ -2.17
SQLE-202ENST00000518604 OR10K2Q6IF99 312 aa1.49□□□□□ -2.17
SQLE-202ENST00000518604 TNFAIP8L2Q6P589 184 aaPredicted RBP1.49□□□□□ -2.17
SQLE-202ENST00000518604 ZNF563Q8TA94 476 aa1.49□□□□□ -2.17
SQLE-202ENST00000518604 DNAJB3Q8WWF6 145 aa1.49□□□□□ -2.17
SQLE-202ENST00000518604 RNASE6Q93091 150 aaKnown RBP1.49□□□□□ -2.17
SQLE-202ENST00000518604 SFRP2Q96HF1 295 aa1.49□□□□□ -2.17
SQLE-202ENST00000518604 KCTD7Q96MP8 289 aa1.49□□□□□ -2.17
SQLE-202ENST00000518604 TMEM109Q9BVC6 243 aa1.49□□□□□ -2.17
SQLE-202ENST00000518604 DERL2Q9GZP9 239 aa1.49□□□□□ -2.17
SQLE-202ENST00000518604 HDHD2Q9H0R4 259 aa1.49□□□□□ -2.17
SQLE-202ENST00000518604 PLEKHJ1Q9NW61 149 aa1.49□□□□□ -2.17
SQLE-202ENST00000518604 BABAM2Q9NXR7 383 aa1.49□□□□□ -2.17
SQLE-202ENST00000518604 TAAR3PQ9P1P4 343 aa1.49□□□□□ -2.17
SQLE-202ENST00000518604 DOCK10Q96BY6 2186 aa1.49□□□□□ -2.17
SQLE-202ENST00000518604 DISP1Q96F81 1524 aa1.49□□□□□ -2.17
SQLE-202ENST00000518604 DICER1Q9UPY3 1922 aaKnown RBP1.48□□□□□ -2.17
SQLE-202ENST00000518604 ARHGAP32A7KAX9 2087 aa1.48□□□□□ -2.17
SQLE-202ENST00000518604 ATG2BQ96BY7 2078 aa1.48□□□□□ -2.17
SQLE-202ENST00000518604 TMSB15BA0A087X1C1 80 aa1.48□□□□□ -2.17
SQLE-202ENST00000518604 GOLGA8KD6RF30 607 aa1.48□□□□□ -2.17
SQLE-202ENST00000518604 F5H768 121 aa1.48□□□□□ -2.17
SQLE-202ENST00000518604 GOLGA8MH3BSY2 632 aa1.48□□□□□ -2.17
SQLE-202ENST00000518604 SSNA1O43805 119 aa1.48□□□□□ -2.17
SQLE-202ENST00000518604 KRT75O95678 551 aa1.48□□□□□ -2.17
SQLE-202ENST00000518604 BPGMP07738 259 aa1.48□□□□□ -2.17
SQLE-202ENST00000518604 CD40LGP29965 261 aa1.48□□□□□ -2.17
SQLE-202ENST00000518604 CDK9P50750 372 aaKnown RBP1.48□□□□□ -2.17
SQLE-202ENST00000518604 MAP3K7CLP57077 242 aa1.48□□□□□ -2.17
SQLE-202ENST00000518604 FXYD7P58549 80 aa1.48□□□□□ -2.17
SQLE-202ENST00000518604 FAM201AQ5SY85 155 aa1.48□□□□□ -2.17
SQLE-202ENST00000518604 Q6ZRN7 208 aaPredicted RBP1.48□□□□□ -2.17
SQLE-202ENST00000518604 NAA40Q86UY6 237 aa1.48□□□□□ -2.17
SQLE-202ENST00000518604 OR13C8Q8NGS7 320 aa1.48□□□□□ -2.17
SQLE-202ENST00000518604 SPACA4Q8TDM5 124 aa1.48□□□□□ -2.17
SQLE-202ENST00000518604 CMTM5Q96DZ9 223 aa1.48□□□□□ -2.17
SQLE-202ENST00000518604 V9GYY5 206 aaPredicted RBP1.48□□□□□ -2.17
SQLE-202ENST00000518604 COL4A1P02462 1669 aa1.48□□□□□ -2.17
SQLE-202ENST00000518604 NUP160Q12769 1436 aa1.48□□□□□ -2.17
SQLE-202ENST00000518604 A0A0A6YYH2 397 aa1.47□□□□□ -2.17
SQLE-202ENST00000518604 C1orf232A0A0U1RR37 186 aa1.47□□□□□ -2.17
SQLE-202ENST00000518604 A0A1B0GVG6 124 aa1.47□□□□□ -2.17
SQLE-202ENST00000518604 A6NJ64 397 aa1.47□□□□□ -2.17
SQLE-202ENST00000518604 E2F6O75461 281 aa1.47□□□□□ -2.17
SQLE-202ENST00000518604 APOMO95445 188 aa1.47□□□□□ -2.17
SQLE-202ENST00000518604 TMEM258P61165 79 aa1.47□□□□□ -2.17
SQLE-202ENST00000518604 AP1S1P61966 158 aa1.47□□□□□ -2.17
SQLE-202ENST00000518604 JOSD1Q15040 202 aaPredicted RBP1.47□□□□□ -2.17
SQLE-202ENST00000518604 MIAQ16674 131 aa1.47□□□□□ -2.17
SQLE-202ENST00000518604 LYZL1Q6UWQ5 148 aa1.47□□□□□ -2.17
SQLE-202ENST00000518604 GPHB5Q86YW7 130 aa1.47□□□□□ -2.17
SQLE-202ENST00000518604 UBL4BQ8N7F7 174 aa1.47□□□□□ -2.17
SQLE-202ENST00000518604 MNS1Q8NEH6 495 aa1.47□□□□□ -2.17
SQLE-202ENST00000518604 ZNF675Q8TD23 568 aa1.47□□□□□ -2.17
SQLE-202ENST00000518604 NMNAT3Q96T66 252 aa1.47□□□□□ -2.17
SQLE-202ENST00000518604 CCL13Q99616 98 aa1.47□□□□□ -2.17
SQLE-202ENST00000518604 UPF3BQ9BZI7 483 aaKnown RBP1.47□□□□□ -2.17
SQLE-202ENST00000518604 PARVGQ9HBI0 331 aa1.47□□□□□ -2.17
SQLE-202ENST00000518604 POLR1DQ9Y2S0 133 aa1.47□□□□□ -2.17
SQLE-202ENST00000518604 AMMECR1Q9Y4X0 333 aaPredicted RBP1.47□□□□□ -2.17
SQLE-202ENST00000518604 RGS12O14924 1447 aa1.47□□□□□ -2.17
SQLE-202ENST00000518604 ABCC12Q96J65 1359 aa1.47□□□□□ -2.17
SQLE-202ENST00000518604 MDC1Q14676 2089 aaKnown RBP1.46□□□□□ -2.18
SQLE-202ENST00000518604 TRGV2A0A075B6R0 118 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms