RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 CELA2AP08217 269 aa4.98□□□□□ -1.61
USP38-203ENST00000511739 DLK1P80370 383 aa4.98□□□□□ -1.61
USP38-203ENST00000511739 ZNF415Q09FC8 603 aa4.98□□□□□ -1.61
USP38-203ENST00000511739 MBNL2Q5VZF2 373 aaKnown RBP4.98□□□□□ -1.61
USP38-203ENST00000511739 C9orf40Q8IXQ3 194 aa4.98□□□□□ -1.61
USP38-203ENST00000511739 C11orf44Q8N8P7 122 aa4.98□□□□□ -1.61
USP38-203ENST00000511739 ZNF501Q96CX3 271 aaPredicted RBP4.98□□□□□ -1.61
USP38-203ENST00000511739 QTRT1Q9BXR0 403 aaKnown RBP4.98□□□□□ -1.61
USP38-203ENST00000511739 IGHV3-49A0A0A0MS15 119 aa4.98□□□□□ -1.61
USP38-203ENST00000511739 LNP1A1A4G5 178 aa4.98□□□□□ -1.61
USP38-203ENST00000511739 RBMY1BA6NDE4 496 aaKnown RBP4.98□□□□□ -1.61
USP38-203ENST00000511739 RBMY1EA6NEQ0 496 aaKnown RBP4.98□□□□□ -1.61
USP38-203ENST00000511739 REG1AP05451 166 aa4.98□□□□□ -1.61
USP38-203ENST00000511739 RBMY1DP0C7P1 496 aaKnown RBP4.98□□□□□ -1.61
USP38-203ENST00000511739 RBMY1A1P0DJD3 496 aaKnown RBP4.98□□□□□ -1.61
USP38-203ENST00000511739 RBMY1CP0DJD4 496 aa4.98□□□□□ -1.61
USP38-203ENST00000511739 TMEM50BP56557 158 aa4.98□□□□□ -1.61
USP38-203ENST00000511739 PSG4Q00888 419 aa4.98□□□□□ -1.61
USP38-203ENST00000511739 ZXDCQ2QGD7 858 aaPredicted RBP4.98□□□□□ -1.61
USP38-203ENST00000511739 WNT5BQ9H1J7 359 aa4.98□□□□□ -1.61
USP38-203ENST00000511739 PRR13Q9NZ81 148 aa4.98□□□□□ -1.61
USP38-203ENST00000511739 PILRBQ9UKJ0 227 aa4.98□□□□□ -1.61
USP38-203ENST00000511739 TRBV7-9A0A0J9YWB2 115 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 ODAMA1E959 279 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 FOXI3A8MTJ6 420 aaPredicted RBP4.97□□□□□ -1.61
USP38-203ENST00000511739 SPINT1O43278 529 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 CDS2O95674 445 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 OR2H2O95918 312 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 CNTFRP26992 372 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 RBM11P57052 281 aaKnown RBP4.97□□□□□ -1.61
USP38-203ENST00000511739 ST3GAL2Q16842 350 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 C3orf36Q3SXR2 165 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 C12orf57Q99622 126 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 LINC00470Q9BZP3 86 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 PRO1933Q9H354 126 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 AURKAIP1Q9NWT8 199 aaPredicted RBP4.97□□□□□ -1.61
USP38-203ENST00000511739 ZFC3H1O60293 1989 aaKnown RBP4.97□□□□□ -1.61
USP38-203ENST00000511739 LOC102723996A0A087X1L8 192 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 A0A1W2PQM1 296 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 FAM74A7A6NL05 159 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 H3BRM9 83 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 FUCA1P04066 466 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 IFI6P09912 130 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 GZMMP51124 257 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 DNLZQ5SXM8 178 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 TCF24Q7RTU0 167 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 SPNS2Q8IVW8 549 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 ZPLD1Q8TCW7 415 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 LSM10Q969L4 123 aaKnown RBP4.97□□□□□ -1.61
USP38-203ENST00000511739 DMRTA2Q96SC8 542 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 SEMA5BQ9P283 1151 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 LILRA1O75019 489 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 CRHP06850 196 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 EWSR1Q01844 656 aaKnown RBP eCLIP4.97□□□□□ -1.61
USP38-203ENST00000511739 PLPPR5Q32ZL2 321 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 FAM27BQ5VT28 67 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 C12orf54Q6X4T0 127 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 MRPL24Q96A35 216 aaKnown RBP4.97□□□□□ -1.61
USP38-203ENST00000511739 TMEM45BQ96B21 275 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 ABHD17AQ96GS6 310 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 LRRC3BQ96PB8 259 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 ZNF703Q9H7S9 590 aaPredicted RBP4.97□□□□□ -1.61
USP38-203ENST00000511739 FUT9Q9Y231 359 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 IGHV3-66A0A0C4DH42 116 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 A0A1B0GVG6 124 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 C19orf67A6NJJ6 358 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 ERGP11308 486 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 MYOD1P15172 320 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 GZMKP49863 264 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 CDCP2Q5VXM1 449 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 XAF1Q6GPH4 301 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 PRDM6Q9NQX0 595 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 ZNF107Q9UII5 783 aaPredicted RBP4.97□□□□□ -1.61
USP38-203ENST00000511739 ST6GALNAC2Q9UJ37 374 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 TRGV4A0A0C4DH28 118 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 DIRC3C9JPN6 131 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 HRKO00198 91 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 IL4P05112 153 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 EFNB2P52799 333 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 TMEM170BQ5T4T1 132 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 LYZL2Q7Z4W2 148 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 CRIPAKQ8N1N5 446 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 ZNF645Q8N7E2 425 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 BEND2Q8NDZ0 799 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 FDCSPQ8NFU4 85 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 OR9G4Q8NGQ1 327 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 SRSF12Q8WXF0 261 aaKnown RBP4.97□□□□□ -1.61
USP38-203ENST00000511739 DPM3Q9P2X0 92 aa4.97□□□□□ -1.61
USP38-203ENST00000511739 PIKFYVEQ9Y2I7 2098 aa4.96□□□□□ -1.61
USP38-203ENST00000511739 ZNF729A6NN14 1252 aaPredicted RBP4.96□□□□□ -1.61
USP38-203ENST00000511739 PGLYRP4Q96LB8 373 aa4.96□□□□□ -1.61
USP38-203ENST00000511739 HDHD3Q9BSH5 251 aaPredicted RBP4.96□□□□□ -1.61
USP38-203ENST00000511739 AKIP1Q9NQ31 210 aa4.96□□□□□ -1.61
USP38-203ENST00000511739 B4DEV8 164 aa4.96□□□□□ -1.62
USP38-203ENST00000511739 IGHV3-23P01764 117 aa4.96□□□□□ -1.62
USP38-203ENST00000511739 ZNF25P17030 456 aaPredicted RBP4.96□□□□□ -1.62
USP38-203ENST00000511739 FGF12P61328 243 aa4.96□□□□□ -1.62
USP38-203ENST00000511739 AANATQ16613 207 aa4.96□□□□□ -1.62
USP38-203ENST00000511739 ACSF3Q4G176 576 aaPredicted RBP4.96□□□□□ -1.62
USP38-203ENST00000511739 LDLRAD2Q5SZI1 272 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms