RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 RDH8Q9NYR8 311 aa12.02□□□□□ -0.49
CXCL1-202ENST00000509101 MGAT4AQ9UM21 535 aa12.02□□□□□ -0.49
CXCL1-202ENST00000509101 NUPR2A6NF83 97 aa12.01□□□□□ -0.49
CXCL1-202ENST00000509101 C2orf70A6NJV1 201 aa12.01□□□□□ -0.49
CXCL1-202ENST00000509101 FAM223BA6NKX1 122 aa12.01□□□□□ -0.49
CXCL1-202ENST00000509101 TMEM14DPA8MWL7 114 aa12.01□□□□□ -0.49
CXCL1-202ENST00000509101 PTGES3LE9PB15 166 aa12.01□□□□□ -0.49
CXCL1-202ENST00000509101 SHOXO15266 292 aa12.01□□□□□ -0.49
CXCL1-202ENST00000509101 SOCS1O15524 211 aa12.01□□□□□ -0.49
CXCL1-202ENST00000509101 CBX3Q13185 183 aa12.01□□□□□ -0.49
CXCL1-202ENST00000509101 MRGPRG-AS1Q2M3A8 158 aa12.01□□□□□ -0.49
CXCL1-202ENST00000509101 C1orf100Q5SVJ3 147 aa12.01□□□□□ -0.49
CXCL1-202ENST00000509101 GLT8D1Q68CQ7 371 aa12.01□□□□□ -0.49
CXCL1-202ENST00000509101 FAM223AQ8IWN6 122 aa12.01□□□□□ -0.49
CXCL1-202ENST00000509101 NANOGP1Q8N7R0 232 aa12.01□□□□□ -0.49
CXCL1-202ENST00000509101 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.01□□□□□ -0.49
CXCL1-202ENST00000509101 OVOL2Q9BRP0 275 aa12.01□□□□□ -0.49
CXCL1-202ENST00000509101 OR2D2Q9H210 308 aa12.01□□□□□ -0.49
CXCL1-202ENST00000509101 Q9N2K0 584 aa12.01□□□□□ -0.49
CXCL1-202ENST00000509101 C12orf4Q9NQ89 552 aa12.01□□□□□ -0.49
CXCL1-202ENST00000509101 SRRM4A7MD48 611 aaKnown RBP12□□□□□ -0.49
CXCL1-202ENST00000509101 PPP5D1E7EU14 171 aa12□□□□□ -0.49
CXCL1-202ENST00000509101 TUSC2O75896 110 aa12□□□□□ -0.49
CXCL1-202ENST00000509101 CDK1P06493 297 aa12□□□□□ -0.49
CXCL1-202ENST00000509101 FOLR2P14207 255 aa12□□□□□ -0.49
CXCL1-202ENST00000509101 QRFPP83859 136 aa12□□□□□ -0.49
CXCL1-202ENST00000509101 ZNF45Q02386 682 aa12□□□□□ -0.49
CXCL1-202ENST00000509101 ATP5G2Q06055 141 aa12□□□□□ -0.49
CXCL1-202ENST00000509101 TMEM177Q53S58 311 aa12□□□□□ -0.49
CXCL1-202ENST00000509101 IDO2Q6ZQW0 420 aa12□□□□□ -0.49
CXCL1-202ENST00000509101 SLC16A13Q7RTY0 426 aa12□□□□□ -0.49
CXCL1-202ENST00000509101 LRRTM1Q86UE6 522 aa12□□□□□ -0.49
CXCL1-202ENST00000509101 RPP25LQ8N5L8 163 aaKnown RBP12□□□□□ -0.49
CXCL1-202ENST00000509101 SRSF12Q8WXF0 261 aaKnown RBP12□□□□□ -0.49
CXCL1-202ENST00000509101 CACNG8Q8WXS5 425 aa12□□□□□ -0.49
CXCL1-202ENST00000509101 C5orf30Q96GV9 206 aa12□□□□□ -0.49
CXCL1-202ENST00000509101 GGTLC1Q9BX51 225 aa12□□□□□ -0.49
CXCL1-202ENST00000509101 LPAR5Q9H1C0 372 aa12□□□□□ -0.49
CXCL1-202ENST00000509101 SDHAF2Q9NX18 166 aa12□□□□□ -0.49
CXCL1-202ENST00000509101 PCLOQ9Y6V0 5065 aa12□□□□□ -0.49
CXCL1-202ENST00000509101 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.99□□□□□ -0.49
CXCL1-202ENST00000509101 MYL12BO14950 172 aa11.99□□□□□ -0.49
CXCL1-202ENST00000509101 HLA-AP01891 365 aaKnown RBP11.99□□□□□ -0.49
CXCL1-202ENST00000509101 CD1AP06126 327 aa11.99□□□□□ -0.49
CXCL1-202ENST00000509101 SRMP19623 302 aa11.99□□□□□ -0.49
CXCL1-202ENST00000509101 KIR2DS2P43631 304 aa11.99□□□□□ -0.49
CXCL1-202ENST00000509101 WNT4P56705 351 aa11.99□□□□□ -0.49
CXCL1-202ENST00000509101 EWSR1Q01844 656 aaKnown RBP eCLIP11.99□□□□□ -0.49
CXCL1-202ENST00000509101 ACOT12Q8WYK0 555 aa11.99□□□□□ -0.49
CXCL1-202ENST00000509101 VCX3BQ9H321 246 aa11.99□□□□□ -0.49
CXCL1-202ENST00000509101 TECRQ9NZ01 308 aaKnown RBP11.99□□□□□ -0.49
CXCL1-202ENST00000509101 TRBV9A0A0B4J1U6 114 aa11.98□□□□□ -0.49
CXCL1-202ENST00000509101 A0A0J9YWU9 116 aa11.98□□□□□ -0.49
CXCL1-202ENST00000509101 BPNT1O95861 308 aa11.98□□□□□ -0.49
CXCL1-202ENST00000509101 CD3GP09693 182 aa11.98□□□□□ -0.49
CXCL1-202ENST00000509101 PRSS8Q16651 343 aa11.98□□□□□ -0.49
CXCL1-202ENST00000509101 RTL8BQ17RB0 113 aa11.98□□□□□ -0.49
CXCL1-202ENST00000509101 VMA21Q3ZAQ7 101 aa11.98□□□□□ -0.49
CXCL1-202ENST00000509101 ACSM3Q53FZ2 586 aa11.98□□□□□ -0.49
CXCL1-202ENST00000509101 KCTD12Q96CX2 325 aaKnown RBP11.98□□□□□ -0.49
CXCL1-202ENST00000509101 CMSS1Q9BQ75 279 aaKnown RBP11.98□□□□□ -0.49
CXCL1-202ENST00000509101 URM1Q9BTM9 101 aaKnown RBP11.98□□□□□ -0.49
CXCL1-202ENST00000509101 LSM2Q9Y333 95 aaKnown RBP11.98□□□□□ -0.49
CXCL1-202ENST00000509101 LOC102724200A0A096LPH7 203 aaPredicted RBP11.97□□□□□ -0.49
CXCL1-202ENST00000509101 TRDCB7Z8K6 153 aa11.97□□□□□ -0.49
CXCL1-202ENST00000509101 BET1O15155 118 aa11.97□□□□□ -0.49
CXCL1-202ENST00000509101 OR2J3O76001 311 aa11.97□□□□□ -0.49
CXCL1-202ENST00000509101 UBE2KP61086 200 aa11.97□□□□□ -0.49
CXCL1-202ENST00000509101 IRF3Q14653 427 aa11.97□□□□□ -0.49
CXCL1-202ENST00000509101 P2RY14Q15391 338 aa11.97□□□□□ -0.49
CXCL1-202ENST00000509101 C15orf32Q32M92 178 aa11.97□□□□□ -0.49
CXCL1-202ENST00000509101 TMEM61Q8N0U2 210 aa11.97□□□□□ -0.49
CXCL1-202ENST00000509101 TEX45Q8NA69 505 aa11.97□□□□□ -0.49
CXCL1-202ENST00000509101 OR52B4Q8NGK2 314 aa11.97□□□□□ -0.49
CXCL1-202ENST00000509101 OR6M1Q8NGM8 313 aa11.97□□□□□ -0.49
CXCL1-202ENST00000509101 PHYHIPQ92561 330 aa11.97□□□□□ -0.49
CXCL1-202ENST00000509101 ARHGAP5-AS1Q96IT6 56 aa11.97□□□□□ -0.49
CXCL1-202ENST00000509101 CNBD2Q96M20 576 aa11.97□□□□□ -0.49
CXCL1-202ENST00000509101 DUSP21Q9H596 190 aa11.97□□□□□ -0.49
CXCL1-202ENST00000509101 SCN3BQ9NY72 215 aa11.97□□□□□ -0.49
CXCL1-202ENST00000509101 FOXI3A8MTJ6 420 aaPredicted RBP11.96□□□□□ -0.49
CXCL1-202ENST00000509101 GGCTO75223 188 aaKnown RBP11.96□□□□□ -0.49
CXCL1-202ENST00000509101 DEDDO75618 318 aa11.96□□□□□ -0.49
CXCL1-202ENST00000509101 OR2C1O95371 312 aa11.96□□□□□ -0.49
CXCL1-202ENST00000509101 CRYZL1O95825 349 aa11.96□□□□□ -0.49
CXCL1-202ENST00000509101 TMEM50BP56557 158 aa11.96□□□□□ -0.49
CXCL1-202ENST00000509101 C10orf55Q5SWW7 151 aa11.96□□□□□ -0.49
CXCL1-202ENST00000509101 CEMP1Q6PRD7 247 aaPredicted RBP11.96□□□□□ -0.49
CXCL1-202ENST00000509101 CEACAM19Q7Z692 300 aa11.96□□□□□ -0.49
CXCL1-202ENST00000509101 NECAP1Q8NC96 275 aa11.96□□□□□ -0.49
CXCL1-202ENST00000509101 OR4A4PQ8NGN8 299 aa11.96□□□□□ -0.49
CXCL1-202ENST00000509101 PECRQ9BY49 303 aa11.96□□□□□ -0.49
CXCL1-202ENST00000509101 HSF4Q9ULV5 492 aa11.96□□□□□ -0.49
CXCL1-202ENST00000509101 DMRT1Q9Y5R6 373 aa11.96□□□□□ -0.49
CXCL1-202ENST00000509101 LGALS9O00182 355 aa11.95□□□□□ -0.5
CXCL1-202ENST00000509101 FABP7O15540 132 aa11.95□□□□□ -0.5
CXCL1-202ENST00000509101 SCAF4O95104 1147 aaKnown RBP11.95□□□□□ -0.5
CXCL1-202ENST00000509101 RRASP10301 218 aa11.95□□□□□ -0.5
CXCL1-202ENST00000509101 CRHBPP24387 322 aa11.95□□□□□ -0.5
CXCL1-202ENST00000509101 SERPINB10P48595 397 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms