RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 C14orf166Q9Y224 244 aaKnown RBP16.02■□□□□ 0.16
CTSD-206ENST00000497544 PLA2G10O15496 165 aa16.01■□□□□ 0.15
CTSD-206ENST00000497544 LYRM1O43325 122 aa16.01■□□□□ 0.15
CTSD-206ENST00000497544 OR2F2O95006 317 aa16.01■□□□□ 0.15
CTSD-206ENST00000497544 CTSDP07339 412 aaPredicted RBP16.01■□□□□ 0.15
CTSD-206ENST00000497544 PI3P19957 117 aa16.01■□□□□ 0.15
CTSD-206ENST00000497544 RPS16P62249 146 aaKnown RBP16.01■□□□□ 0.15
CTSD-206ENST00000497544 EIF4EBP1Q13541 118 aaPredicted RBP16.01■□□□□ 0.15
CTSD-206ENST00000497544 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.01■□□□□ 0.15
CTSD-206ENST00000497544 POC5Q8NA72 575 aa16.01■□□□□ 0.15
CTSD-206ENST00000497544 OR51H1Q8NH63 302 aa16.01■□□□□ 0.15
CTSD-206ENST00000497544 DDB2Q92466 427 aa16.01■□□□□ 0.15
CTSD-206ENST00000497544 FLYWCH2Q96CP2 140 aaKnown RBP16.01■□□□□ 0.15
CTSD-206ENST00000497544 RBMXL1Q96E39 390 aaKnown RBP16.01■□□□□ 0.15
CTSD-206ENST00000497544 SLC25A33Q9BSK2 321 aa16.01■□□□□ 0.15
CTSD-206ENST00000497544 GPR132Q9UNW8 380 aa16.01■□□□□ 0.15
CTSD-206ENST00000497544 NCBP2LA6PVI3 153 aaKnown RBP16■□□□□ 0.15
CTSD-206ENST00000497544 FCGR3BO75015 233 aa16■□□□□ 0.15
CTSD-206ENST00000497544 KIR2DS2P43631 304 aa16■□□□□ 0.15
CTSD-206ENST00000497544 PIGPP57054 158 aa16■□□□□ 0.15
CTSD-206ENST00000497544 FBLN7Q53RD9 439 aa16■□□□□ 0.15
CTSD-206ENST00000497544 CCDC71LQ8N9Z2 235 aa16■□□□□ 0.15
CTSD-206ENST00000497544 MRGPRFQ96AM1 343 aa16■□□□□ 0.15
CTSD-206ENST00000497544 RNF5Q99942 180 aa16■□□□□ 0.15
CTSD-206ENST00000497544 SLC25A21Q9BQT8 299 aaPredicted RBP16■□□□□ 0.15
CTSD-206ENST00000497544 C1RLQ9NZP8 487 aa16■□□□□ 0.15
CTSD-206ENST00000497544 COPZ2Q9P299 210 aa16■□□□□ 0.15
CTSD-206ENST00000497544 FAM181BA6NEQ2 426 aa15.99■□□□□ 0.15
CTSD-206ENST00000497544 RLN1P04808 185 aa15.99■□□□□ 0.15
CTSD-206ENST00000497544 RND3P61587 244 aa15.99■□□□□ 0.15
CTSD-206ENST00000497544 OR2B11Q5JQS5 317 aa15.99■□□□□ 0.15
CTSD-206ENST00000497544 DHRS7BQ6IAN0 325 aaPredicted RBP15.99■□□□□ 0.15
CTSD-206ENST00000497544 MZT2BQ6NZ67 158 aa15.99■□□□□ 0.15
CTSD-206ENST00000497544 TBC1D26Q86UD7 250 aa15.99■□□□□ 0.15
CTSD-206ENST00000497544 OR4C13Q8NGP0 309 aa15.99■□□□□ 0.15
CTSD-206ENST00000497544 SLC2A9Q9NRM0 540 aa15.99■□□□□ 0.15
CTSD-206ENST00000497544 SHOXO15266 292 aa15.98■□□□□ 0.15
CTSD-206ENST00000497544 MPPED1O15442 326 aa15.98■□□□□ 0.15
CTSD-206ENST00000497544 CRYZL1O95825 349 aa15.98■□□□□ 0.15
CTSD-206ENST00000497544 IGKV1-16P04430 117 aa15.98■□□□□ 0.15
CTSD-206ENST00000497544 CCR6P51684 374 aa15.98■□□□□ 0.15
CTSD-206ENST00000497544 RPL15P61313 204 aaKnown RBP15.98■□□□□ 0.15
CTSD-206ENST00000497544 RBMS2Q15434 407 aaKnown RBP15.98■□□□□ 0.15
CTSD-206ENST00000497544 SPAG16Q8N0X2 631 aa15.98■□□□□ 0.15
CTSD-206ENST00000497544 Q8N6K4 173 aa15.98■□□□□ 0.15
CTSD-206ENST00000497544 OR8H1Q8NGG4 311 aa15.98■□□□□ 0.15
CTSD-206ENST00000497544 CD300LFQ8TDQ1 290 aa15.98■□□□□ 0.15
CTSD-206ENST00000497544 RITA1Q96K30 269 aa15.98■□□□□ 0.15
CTSD-206ENST00000497544 RTBDNQ9BSG5 229 aaPredicted RBP15.98■□□□□ 0.15
CTSD-206ENST00000497544 MOB4Q9Y3A3 225 aa15.98■□□□□ 0.15
CTSD-206ENST00000497544 CHST1O43916 411 aa15.97■□□□□ 0.15
CTSD-206ENST00000497544 PEX14O75381 377 aa15.97■□□□□ 0.15
CTSD-206ENST00000497544 F2RP25116 425 aa15.97■□□□□ 0.15
CTSD-206ENST00000497544 LGALS7P47929 136 aa15.97■□□□□ 0.15
CTSD-206ENST00000497544 F2RL1P55085 397 aa15.97■□□□□ 0.15
CTSD-206ENST00000497544 IFITM3Q01628 133 aa15.97■□□□□ 0.15
CTSD-206ENST00000497544 MMDQ15546 238 aa15.97■□□□□ 0.15
CTSD-206ENST00000497544 TMEM177Q53S58 311 aa15.97■□□□□ 0.15
CTSD-206ENST00000497544 TCTEX1D1Q8N7M0 179 aa15.97■□□□□ 0.15
CTSD-206ENST00000497544 OR4S2Q8NH73 311 aa15.97■□□□□ 0.15
CTSD-206ENST00000497544 ZFAND2BQ8WV99 257 aa15.97■□□□□ 0.15
CTSD-206ENST00000497544 TSNAXQ99598 290 aaKnown RBP15.97■□□□□ 0.15
CTSD-206ENST00000497544 C5orf66Q9H5L9 145 aa15.97■□□□□ 0.15
CTSD-206ENST00000497544 KIAA1456Q9P272 454 aa15.97■□□□□ 0.15
CTSD-206ENST00000497544 VSIG4Q9Y279 399 aa15.97■□□□□ 0.15
CTSD-206ENST00000497544 TEX13DA0A0J9YY54 714 aaPredicted RBP15.96■□□□□ 0.15
CTSD-206ENST00000497544 M0QZK8 103 aa15.96■□□□□ 0.15
CTSD-206ENST00000497544 DEFA1P59665 94 aa15.96■□□□□ 0.15
CTSD-206ENST00000497544 DEFA3P59666 94 aa15.96■□□□□ 0.15
CTSD-206ENST00000497544 ASAH1Q13510 395 aa15.96■□□□□ 0.15
CTSD-206ENST00000497544 OSR1Q8TAX0 266 aaPredicted RBP15.96■□□□□ 0.15
CTSD-206ENST00000497544 HARBI1Q96MB7 349 aa15.96■□□□□ 0.15
CTSD-206ENST00000497544 NPFFR1Q9GZQ6 430 aa15.96■□□□□ 0.15
CTSD-206ENST00000497544 LIN7CQ9NUP9 197 aaKnown RBP15.96■□□□□ 0.15
CTSD-206ENST00000497544 TBC1D24Q9ULP9 559 aa15.96■□□□□ 0.15
CTSD-206ENST00000497544 KMT2CQ8NEZ4 4911 aaKnown RBP15.95■□□□□ 0.14
CTSD-206ENST00000497544 NBR2O15453 112 aa15.95■□□□□ 0.14
CTSD-206ENST00000497544 FGF16O43320 207 aa15.95■□□□□ 0.14
CTSD-206ENST00000497544 NDUFB6O95139 128 aa15.95■□□□□ 0.14
CTSD-206ENST00000497544 CNTFRP26992 372 aa15.95■□□□□ 0.14
CTSD-206ENST00000497544 BTCP35070 178 aa15.95■□□□□ 0.14
CTSD-206ENST00000497544 BRWD1-AS2P59051 145 aa15.95■□□□□ 0.14
CTSD-206ENST00000497544 NPBQ8NG41 125 aa15.95■□□□□ 0.14
CTSD-206ENST00000497544 RASL11BQ9BPW5 248 aa15.95■□□□□ 0.14
CTSD-206ENST00000497544 PLSCR3Q9NRY6 295 aa15.95■□□□□ 0.14
CTSD-206ENST00000497544 C3orf85A0A1B0GTC6 90 aa15.94■□□□□ 0.14
CTSD-206ENST00000497544 FAM240BA0A1B0GVZ2 78 aa15.94■□□□□ 0.14
CTSD-206ENST00000497544 RBFOX2O43251 390 aaKnown RBP eCLIP15.94■□□□□ 0.142e-12■■■■□ 22.8
CTSD-206ENST00000497544 HPRT1P00492 218 aa15.94■□□□□ 0.14
CTSD-206ENST00000497544 AKR1C4P17516 323 aa15.94■□□□□ 0.14
CTSD-206ENST00000497544 LPAR6P43657 344 aa15.94■□□□□ 0.14
CTSD-206ENST00000497544 C11orf88Q6PI97 169 aa15.94■□□□□ 0.14
CTSD-206ENST00000497544 TMED4Q7Z7H5 227 aa15.94■□□□□ 0.14
CTSD-206ENST00000497544 SGPP2Q8IWX5 399 aa15.94■□□□□ 0.14
CTSD-206ENST00000497544 C5orf56Q8N8D9 126 aa15.94■□□□□ 0.14
CTSD-206ENST00000497544 Q8N9W7 124 aa15.94■□□□□ 0.14
CTSD-206ENST00000497544 ADAD2Q8NCV1 583 aaKnown RBP15.94■□□□□ 0.14
CTSD-206ENST00000497544 PRSS22Q9GZN4 317 aa15.94■□□□□ 0.14
CTSD-206ENST00000497544 RRHO14718 337 aa15.93■□□□□ 0.14
CTSD-206ENST00000497544 RAMP3O60896 148 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms