RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 OR2Y1Q8NGV0 311 aa10.91□□□□□ -0.66
SHOX2-205ENST00000490689 TMEM54Q969K7 222 aa10.91□□□□□ -0.66
SHOX2-205ENST00000490689 MRPL37Q9BZE1 423 aaKnown RBP10.91□□□□□ -0.66
SHOX2-205ENST00000490689 SLC45A2Q9UMX9 530 aa10.91□□□□□ -0.66
SHOX2-205ENST00000490689 A8MWP6 167 aa10.91□□□□□ -0.66
SHOX2-205ENST00000490689 UBE2L3P68036 154 aaKnown RBP10.91□□□□□ -0.66
SHOX2-205ENST00000490689 OR1C1Q15619 314 aa10.91□□□□□ -0.66
SHOX2-205ENST00000490689 SGK494Q96LW2 274 aa10.91□□□□□ -0.66
SHOX2-205ENST00000490689 ODAMA1E959 279 aa10.91□□□□□ -0.66
SHOX2-205ENST00000490689 GALR2O43603 387 aaPredicted RBP10.91□□□□□ -0.66
SHOX2-205ENST00000490689 RPL31P62899 125 aaKnown RBP10.91□□□□□ -0.66
SHOX2-205ENST00000490689 CFHR1Q03591 330 aa10.91□□□□□ -0.66
SHOX2-205ENST00000490689 WDR73Q6P4I2 378 aa10.91□□□□□ -0.66
SHOX2-205ENST00000490689 ZNF441Q8N8Z8 693 aa10.91□□□□□ -0.66
SHOX2-205ENST00000490689 SCCPDHQ8NBX0 429 aa10.91□□□□□ -0.66
SHOX2-205ENST00000490689 WDYHV1Q96HA8 205 aa10.91□□□□□ -0.66
SHOX2-205ENST00000490689 PHF7Q9BWX1 381 aaPredicted RBP10.91□□□□□ -0.66
SHOX2-205ENST00000490689 PLSCR2Q9NRY7 297 aa10.91□□□□□ -0.66
SHOX2-205ENST00000490689 PPIHO43447 177 aaKnown RBP10.91□□□□□ -0.66
SHOX2-205ENST00000490689 TGIF2LYQ8IUE0 185 aa10.91□□□□□ -0.66
SHOX2-205ENST00000490689 MMD2Q8IY49 270 aa10.91□□□□□ -0.66
SHOX2-205ENST00000490689 C2orf88Q9BSF0 95 aa10.91□□□□□ -0.66
SHOX2-205ENST00000490689 SSBP3Q9BWW4 388 aaPredicted RBP10.91□□□□□ -0.66
SHOX2-205ENST00000490689 NPCDR1Q9BY65 106 aa10.91□□□□□ -0.66
SHOX2-205ENST00000490689 CRYBB3P26998 211 aa10.9□□□□□ -0.66
SHOX2-205ENST00000490689 ZNF137PP52743 207 aa10.9□□□□□ -0.66
SHOX2-205ENST00000490689 CPEB3Q8NE35 698 aaKnown RBP10.9□□□□□ -0.66
SHOX2-205ENST00000490689 NFAM1Q8NET5 270 aaPredicted RBP10.9□□□□□ -0.66
SHOX2-205ENST00000490689 LRRC29Q8WV35 223 aa10.9□□□□□ -0.66
SHOX2-205ENST00000490689 FAM173AQ9BQD7 235 aa10.9□□□□□ -0.66
SHOX2-205ENST00000490689 DERL1Q9BUN8 251 aa10.9□□□□□ -0.66
SHOX2-205ENST00000490689 SERTM2A0A1B0GWG4 89 aa10.9□□□□□ -0.66
SHOX2-205ENST00000490689 SCO2A0A1W2PP80 73 aa10.9□□□□□ -0.66
SHOX2-205ENST00000490689 EPHA8P29322 1005 aaPredicted RBP10.9□□□□□ -0.66
SHOX2-205ENST00000490689 S100A7P31151 101 aa10.9□□□□□ -0.66
SHOX2-205ENST00000490689 MDP1Q86V88 176 aa10.9□□□□□ -0.66
SHOX2-205ENST00000490689 SH3BGRL2Q9UJC5 107 aa10.9□□□□□ -0.66
SHOX2-205ENST00000490689 APCSP02743 223 aa10.9□□□□□ -0.67
SHOX2-205ENST00000490689 ARL3P36405 182 aa10.9□□□□□ -0.67
SHOX2-205ENST00000490689 GNB2P62879 340 aa10.9□□□□□ -0.67
SHOX2-205ENST00000490689 Q6ZRM9 215 aa10.9□□□□□ -0.67
SHOX2-205ENST00000490689 SLC25A40Q8TBP6 338 aa10.9□□□□□ -0.67
SHOX2-205ENST00000490689 A0A1W2PQM1 296 aa10.89□□□□□ -0.67
SHOX2-205ENST00000490689 SPRY3O43610 288 aa10.89□□□□□ -0.67
SHOX2-205ENST00000490689 ADMP35318 185 aa10.89□□□□□ -0.67
SHOX2-205ENST00000490689 ARL16Q0P5N6 197 aa10.89□□□□□ -0.67
SHOX2-205ENST00000490689 IL11RAQ14626 422 aa10.89□□□□□ -0.67
SHOX2-205ENST00000490689 ZNF738Q8NE65 137 aa10.89□□□□□ -0.67
SHOX2-205ENST00000490689 OR4B1Q8NGF8 309 aa10.89□□□□□ -0.67
SHOX2-205ENST00000490689 LSM10Q969L4 123 aaKnown RBP10.89□□□□□ -0.67
SHOX2-205ENST00000490689 RAB9BQ9NP90 201 aa10.89□□□□□ -0.67
SHOX2-205ENST00000490689 UQCR10Q9UDW1 63 aa10.89□□□□□ -0.67
SHOX2-205ENST00000490689 A0A0G2JMM0 328 aa10.89□□□□□ -0.67
SHOX2-205ENST00000490689 A0A1W2PPB8 328 aa10.89□□□□□ -0.67
SHOX2-205ENST00000490689 A0A1W2PRS3 328 aa10.89□□□□□ -0.67
SHOX2-205ENST00000490689 LRRC30A6NM36 301 aa10.89□□□□□ -0.67
SHOX2-205ENST00000490689 KIR3DP1A8MWS1 328 aa10.89□□□□□ -0.67
SHOX2-205ENST00000490689 CD99P14209 185 aa10.89□□□□□ -0.67
SHOX2-205ENST00000490689 NPY1RP25929 384 aa10.89□□□□□ -0.67
SHOX2-205ENST00000490689 ZNF718Q3SXZ3 478 aa10.89□□□□□ -0.67
SHOX2-205ENST00000490689 NMSQ5H8A3 153 aa10.89□□□□□ -0.67
SHOX2-205ENST00000490689 TEX38Q6PEX7 206 aa10.89□□□□□ -0.67
SHOX2-205ENST00000490689 SPEM1Q8N4L4 309 aa10.89□□□□□ -0.67
SHOX2-205ENST00000490689 ST6GALNAC6Q969X2 333 aa10.89□□□□□ -0.67
SHOX2-205ENST00000490689 SNHG12Q9BXW3 62 aa10.89□□□□□ -0.67
SHOX2-205ENST00000490689 TMEM106BQ9NUM4 274 aa10.89□□□□□ -0.67
SHOX2-205ENST00000490689 A0A1B0GW64 132 aa10.89□□□□□ -0.67
SHOX2-205ENST00000490689 A0A1W2PR77 199 aa10.89□□□□□ -0.67
SHOX2-205ENST00000490689 MARCH11A6NNE9 402 aa10.89□□□□□ -0.67
SHOX2-205ENST00000490689 AGFG2O95081 481 aa10.89□□□□□ -0.67
SHOX2-205ENST00000490689 MMDQ15546 238 aa10.89□□□□□ -0.67
SHOX2-205ENST00000490689 TEPPQ6URK8 271 aa10.89□□□□□ -0.67
SHOX2-205ENST00000490689 POM121L2Q96KW2 1035 aa10.89□□□□□ -0.67
SHOX2-205ENST00000490689 HS3ST6Q96QI5 342 aa10.89□□□□□ -0.67
SHOX2-205ENST00000490689 LOXL2Q9Y4K0 774 aa10.89□□□□□ -0.67
SHOX2-205ENST00000490689 TBL2Q9Y4P3 447 aaKnown RBP10.89□□□□□ -0.67
SHOX2-205ENST00000490689 CACNA1BQ00975 2339 aa10.89□□□□□ -0.67
SHOX2-205ENST00000490689 OOEPA6NGQ2 149 aa10.88□□□□□ -0.67
SHOX2-205ENST00000490689 C17orf98A8MV24 154 aa10.88□□□□□ -0.67
SHOX2-205ENST00000490689 IFNL4K9M1U5 179 aa10.88□□□□□ -0.67
SHOX2-205ENST00000490689 RAMP3O60896 148 aa10.88□□□□□ -0.67
SHOX2-205ENST00000490689 TMEM11P17152 192 aa10.88□□□□□ -0.67
SHOX2-205ENST00000490689 PLAUP00749 431 aa10.88□□□□□ -0.67
SHOX2-205ENST00000490689 SLC25A5P05141 298 aaKnown RBP10.88□□□□□ -0.67
SHOX2-205ENST00000490689 ORM2P19652 201 aa10.88□□□□□ -0.67
SHOX2-205ENST00000490689 CCL11P51671 97 aa10.88□□□□□ -0.67
SHOX2-205ENST00000490689 PRR31Q5SQ13 230 aa10.88□□□□□ -0.67
SHOX2-205ENST00000490689 LEAP2Q969E1 77 aa10.88□□□□□ -0.67
SHOX2-205ENST00000490689 MT-CO3P00414 261 aa10.88□□□□□ -0.67
SHOX2-205ENST00000490689 TFF1P04155 84 aa10.88□□□□□ -0.67
SHOX2-205ENST00000490689 SSTR5P35346 364 aa10.88□□□□□ -0.67
SHOX2-205ENST00000490689 MZT1Q08AG7 82 aa10.88□□□□□ -0.67
SHOX2-205ENST00000490689 FAM90A10PA6NDY2 464 aa10.87□□□□□ -0.67
SHOX2-205ENST00000490689 FAM90A18PA6NE21 464 aa10.87□□□□□ -0.67
SHOX2-205ENST00000490689 FAM90A16PA6NEW6 464 aa10.87□□□□□ -0.67
SHOX2-205ENST00000490689 FAM90A20PA6NIJ5 464 aa10.87□□□□□ -0.67
SHOX2-205ENST00000490689 FAM90A8PA6NJQ4 464 aa10.87□□□□□ -0.67
SHOX2-205ENST00000490689 FAM90A7PA6NKC0 464 aa10.87□□□□□ -0.67
SHOX2-205ENST00000490689 FAM90A22PA8MWA6 464 aa10.87□□□□□ -0.67
SHOX2-205ENST00000490689 FAM90A12PA8MX19 464 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms