RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 RRASP10301 218 aa9.88□□□□□ -0.83
TRAIP-209ENST00000488860 IER3P46695 156 aa9.88□□□□□ -0.83
TRAIP-209ENST00000488860 DYNLT3P51808 116 aa9.88□□□□□ -0.83
TRAIP-209ENST00000488860 TAGLNQ01995 201 aaKnown RBP9.88□□□□□ -0.83
TRAIP-209ENST00000488860 HABP2Q14520 560 aaPredicted RBP9.88□□□□□ -0.83
TRAIP-209ENST00000488860 TRIM16LQ309B1 348 aa9.88□□□□□ -0.83
TRAIP-209ENST00000488860 SP6Q3SY56 376 aa9.88□□□□□ -0.83
TRAIP-209ENST00000488860 C4orf46Q504U0 113 aa9.88□□□□□ -0.83
TRAIP-209ENST00000488860 C11orf88Q6PI97 169 aa9.88□□□□□ -0.83
TRAIP-209ENST00000488860 OR2T10Q8NGZ9 312 aa9.88□□□□□ -0.83
TRAIP-209ENST00000488860 OR5R1Q8NH85 324 aa9.88□□□□□ -0.83
TRAIP-209ENST00000488860 CASTOR1Q8WTX7 329 aa9.88□□□□□ -0.83
TRAIP-209ENST00000488860 SSMEM1Q8WWF3 244 aa9.88□□□□□ -0.83
TRAIP-209ENST00000488860 PRR13Q9NZ81 148 aa9.88□□□□□ -0.83
TRAIP-209ENST00000488860 TCF19Q9Y242 345 aa9.88□□□□□ -0.83
TRAIP-209ENST00000488860 MTORP42345 2549 aa9.88□□□□□ -0.83
TRAIP-209ENST00000488860 FAM90A9PA6NNJ1 464 aa9.87□□□□□ -0.83
TRAIP-209ENST00000488860 SHOXO15266 292 aa9.87□□□□□ -0.83
TRAIP-209ENST00000488860 S1PR2O95136 353 aa9.87□□□□□ -0.83
TRAIP-209ENST00000488860 HLA-AP01891 365 aaKnown RBP9.87□□□□□ -0.83
TRAIP-209ENST00000488860 SERPINE2P07093 398 aa9.87□□□□□ -0.83
TRAIP-209ENST00000488860 VSIG10L2P0DP72 767 aa9.87□□□□□ -0.83
TRAIP-209ENST00000488860 ANXA3P12429 323 aa9.87□□□□□ -0.83
TRAIP-209ENST00000488860 RPS16P62249 146 aaKnown RBP9.87□□□□□ -0.83
TRAIP-209ENST00000488860 PPP1R1AQ13522 171 aa9.87□□□□□ -0.83
TRAIP-209ENST00000488860 MMDQ15546 238 aa9.87□□□□□ -0.83
TRAIP-209ENST00000488860 AANATQ16613 207 aa9.87□□□□□ -0.83
TRAIP-209ENST00000488860 TMEM128Q5BJH2 165 aa9.87□□□□□ -0.83
TRAIP-209ENST00000488860 DHRS7BQ6IAN0 325 aaPredicted RBP9.87□□□□□ -0.83
TRAIP-209ENST00000488860 SLC25A42Q86VD7 318 aa9.87□□□□□ -0.83
TRAIP-209ENST00000488860 DUSP18Q8NEJ0 188 aa9.87□□□□□ -0.83
TRAIP-209ENST00000488860 OR4C13Q8NGP0 309 aa9.87□□□□□ -0.83
TRAIP-209ENST00000488860 PIFOQ8TCI5 191 aa9.87□□□□□ -0.83
TRAIP-209ENST00000488860 ZFAND2BQ8WV99 257 aa9.87□□□□□ -0.83
TRAIP-209ENST00000488860 FLYWCH2Q96CP2 140 aaKnown RBP9.87□□□□□ -0.83
TRAIP-209ENST00000488860 EAF1Q96JC9 268 aaPredicted RBP9.87□□□□□ -0.83
TRAIP-209ENST00000488860 SLC25A33Q9BSK2 321 aa9.87□□□□□ -0.83
TRAIP-209ENST00000488860 PITPNC1Q9UKF7 332 aa9.87□□□□□ -0.83
TRAIP-209ENST00000488860 VPREB3Q9UKI3 123 aa9.87□□□□□ -0.83
TRAIP-209ENST00000488860 A6NDX4 124 aa9.86□□□□□ -0.83
TRAIP-209ENST00000488860 NCBP2LA6PVI3 153 aaKnown RBP9.86□□□□□ -0.83
TRAIP-209ENST00000488860 INMT-MINDY4F8WBC2 141 aa9.86□□□□□ -0.83
TRAIP-209ENST00000488860 IFNA2P01563 188 aa9.86□□□□□ -0.83
TRAIP-209ENST00000488860 OR4E1P0C645 316 aa9.86□□□□□ -0.83
TRAIP-209ENST00000488860 RPA2P15927 270 aa9.86□□□□□ -0.83
TRAIP-209ENST00000488860 CNTFRP26992 372 aa9.86□□□□□ -0.83
TRAIP-209ENST00000488860 LPAR6P43657 344 aa9.86□□□□□ -0.83
TRAIP-209ENST00000488860 CCBE1Q6UXH8 406 aaPredicted RBP9.86□□□□□ -0.83
TRAIP-209ENST00000488860 OR52B4Q8NGK2 314 aa9.86□□□□□ -0.83
TRAIP-209ENST00000488860 CD300LFQ8TDQ1 290 aa9.86□□□□□ -0.83
TRAIP-209ENST00000488860 SEC22CQ9BRL7 303 aa9.86□□□□□ -0.83
TRAIP-209ENST00000488860 PRDM13Q9H4Q3 707 aa9.86□□□□□ -0.83
TRAIP-209ENST00000488860 ESM1Q9NQ30 184 aa9.86□□□□□ -0.83
TRAIP-209ENST00000488860 KIAA1456Q9P272 454 aa9.86□□□□□ -0.83
TRAIP-209ENST00000488860 KCNIP3Q9Y2W7 256 aa9.86□□□□□ -0.83
TRAIP-209ENST00000488860 CUBNO60494 3623 aa9.85□□□□□ -0.83
TRAIP-209ENST00000488860 TEP1Q99973 2627 aaKnown RBP9.85□□□□□ -0.83
TRAIP-209ENST00000488860 RBFOX2O43251 390 aaKnown RBP eCLIP9.85□□□□□ -0.83
TRAIP-209ENST00000488860 SFT2D2O95562 160 aa9.85□□□□□ -0.83
TRAIP-209ENST00000488860 HPRT1P00492 218 aa9.85□□□□□ -0.83
TRAIP-209ENST00000488860 BRWD1-AS2P59051 145 aa9.85□□□□□ -0.83
TRAIP-209ENST00000488860 UBE2MP61081 183 aaKnown RBP9.85□□□□□ -0.83
TRAIP-209ENST00000488860 ERVK-16P61578 105 aa9.85□□□□□ -0.83
TRAIP-209ENST00000488860 SUPT4H1P63272 117 aaKnown RBP9.85□□□□□ -0.83
TRAIP-209ENST00000488860 DHODHQ02127 395 aa9.85□□□□□ -0.83
TRAIP-209ENST00000488860 PLGLAQ15195 96 aa9.85□□□□□ -0.83
TRAIP-209ENST00000488860 ZNF585BQ52M93 769 aa9.85□□□□□ -0.83
TRAIP-209ENST00000488860 TMEM177Q53S58 311 aa9.85□□□□□ -0.83
TRAIP-209ENST00000488860 SSX9Q7RTT3 188 aa9.85□□□□□ -0.83
TRAIP-209ENST00000488860 LYG2Q86SG7 212 aa9.85□□□□□ -0.83
TRAIP-209ENST00000488860 THNSL2Q86YJ6 484 aa9.85□□□□□ -0.83
TRAIP-209ENST00000488860 VKORC1L1Q8N0U8 176 aa9.85□□□□□ -0.83
TRAIP-209ENST00000488860 TCTEX1D1Q8N7M0 179 aa9.85□□□□□ -0.83
TRAIP-209ENST00000488860 DMBX1Q8NFW5 382 aa9.85□□□□□ -0.83
TRAIP-209ENST00000488860 RNASE11Q8TAA1 199 aaKnown RBP9.85□□□□□ -0.83
TRAIP-209ENST00000488860 OSR1Q8TAX0 266 aaPredicted RBP9.85□□□□□ -0.83
TRAIP-209ENST00000488860 R3HDM4Q96D70 268 aa9.85□□□□□ -0.83
TRAIP-209ENST00000488860 RITA1Q96K30 269 aa9.85□□□□□ -0.83
TRAIP-209ENST00000488860 TSNAXQ99598 290 aaKnown RBP9.85□□□□□ -0.83
TRAIP-209ENST00000488860 CHIAQ9BZP6 476 aa9.85□□□□□ -0.83
TRAIP-209ENST00000488860 COMMD9Q9P000 198 aa9.85□□□□□ -0.83
TRAIP-209ENST00000488860 MOB4Q9Y3A3 225 aa9.85□□□□□ -0.83
TRAIP-209ENST00000488860 POMT1Q9Y6A1 747 aa9.85□□□□□ -0.83
TRAIP-209ENST00000488860 C9orf170A2RU37 121 aa9.84□□□□□ -0.83
TRAIP-209ENST00000488860 NBR2O15453 112 aa9.84□□□□□ -0.83
TRAIP-209ENST00000488860 TCF21O43680 179 aa9.84□□□□□ -0.83
TRAIP-209ENST00000488860 SLC25A17O43808 307 aa9.84□□□□□ -0.83
TRAIP-209ENST00000488860 CHST1O43916 411 aa9.84□□□□□ -0.83
TRAIP-209ENST00000488860 B3GALNT1O75752 331 aa9.84□□□□□ -0.83
TRAIP-209ENST00000488860 OR2F2O95006 317 aa9.84□□□□□ -0.83
TRAIP-209ENST00000488860 DHFRP00374 187 aa9.84□□□□□ -0.83
TRAIP-209ENST00000488860 HRASP01112 189 aa9.84□□□□□ -0.83
TRAIP-209ENST00000488860 UCP1P25874 307 aa9.84□□□□□ -0.83
TRAIP-209ENST00000488860 G6PCP35575 357 aa9.84□□□□□ -0.83
TRAIP-209ENST00000488860 AKR1C2P52895 323 aa9.84□□□□□ -0.83
TRAIP-209ENST00000488860 F2RL1P55085 397 aa9.84□□□□□ -0.83
TRAIP-209ENST00000488860 HILS1P60008 231 aa9.84□□□□□ -0.83
TRAIP-209ENST00000488860 DHRS2Q13268 280 aa9.84□□□□□ -0.83
TRAIP-209ENST00000488860 EBI3Q14213 229 aa9.84□□□□□ -0.83
TRAIP-209ENST00000488860 TMEM187Q14656 261 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms