RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 C10orf128Q5T292 105 aa5.52□□□□□ -1.53
HDAC3-209ENST00000486618 HIST2H3PS2Q5TEC6 136 aa5.52□□□□□ -1.53
HDAC3-209ENST00000486618 FAM27BQ5VT28 67 aa5.52□□□□□ -1.53
HDAC3-209ENST00000486618 ZNF613Q6PF04 617 aa5.52□□□□□ -1.53
HDAC3-209ENST00000486618 TOMM20LQ6UXN7 152 aa5.52□□□□□ -1.53
HDAC3-209ENST00000486618 Q6ZTK2 550 aa5.52□□□□□ -1.53
HDAC3-209ENST00000486618 MBOAT2Q6ZWT7 520 aa5.52□□□□□ -1.53
HDAC3-209ENST00000486618 SLC16A13Q7RTY0 426 aa5.52□□□□□ -1.53
HDAC3-209ENST00000486618 COMMD7Q86VX2 200 aa5.52□□□□□ -1.53
HDAC3-209ENST00000486618 CMTM1Q8IZ96 169 aa5.52□□□□□ -1.53
HDAC3-209ENST00000486618 C12orf45Q8N5I9 185 aaPredicted RBP5.52□□□□□ -1.53
HDAC3-209ENST00000486618 ZNF439Q8NDP4 499 aa5.52□□□□□ -1.53
HDAC3-209ENST00000486618 Q8WTZ3 238 aa5.52□□□□□ -1.53
HDAC3-209ENST00000486618 MAL2Q969L2 176 aa5.52□□□□□ -1.53
HDAC3-209ENST00000486618 RPUSD4Q96CM3 377 aaKnown RBP5.52□□□□□ -1.53
HDAC3-209ENST00000486618 RBP7Q96R05 134 aa5.52□□□□□ -1.53
HDAC3-209ENST00000486618 TBX5Q99593 518 aa5.52□□□□□ -1.53
HDAC3-209ENST00000486618 MCHR1Q99705 422 aa5.52□□□□□ -1.53
HDAC3-209ENST00000486618 SIGMAR1Q99720 223 aa5.52□□□□□ -1.53
HDAC3-209ENST00000486618 ATF6BQ99941 703 aa5.52□□□□□ -1.53
HDAC3-209ENST00000486618 CMSS1Q9BQ75 279 aaKnown RBP5.52□□□□□ -1.53
HDAC3-209ENST00000486618 C16orf95Q9H693 158 aa5.52□□□□□ -1.53
HDAC3-209ENST00000486618 SLCO1B3Q9NPD5 702 aa5.52□□□□□ -1.53
HDAC3-209ENST00000486618 FAM30AQ9NZY2 134 aa5.52□□□□□ -1.53
HDAC3-209ENST00000486618 TGIF2-C20orf24A0A0A6YYL0 155 aa5.51□□□□□ -1.53
HDAC3-209ENST00000486618 J3QR06 171 aa5.51□□□□□ -1.53
HDAC3-209ENST00000486618 CRXO43186 299 aaPredicted RBP5.51□□□□□ -1.53
HDAC3-209ENST00000486618 MPDU1O75352 247 aa5.51□□□□□ -1.53
HDAC3-209ENST00000486618 TRMUO75648 421 aaKnown RBP5.51□□□□□ -1.53
HDAC3-209ENST00000486618 PRB2P02812 416 aaPredicted RBP5.51□□□□□ -1.53
HDAC3-209ENST00000486618 IRF2P14316 349 aa5.51□□□□□ -1.53
HDAC3-209ENST00000486618 GATA1P15976 413 aaPredicted RBP5.51□□□□□ -1.53
HDAC3-209ENST00000486618 AQP1P29972 269 aa5.51□□□□□ -1.53
HDAC3-209ENST00000486618 LEPP41159 167 aa5.51□□□□□ -1.53
HDAC3-209ENST00000486618 PAX9P55771 341 aa5.51□□□□□ -1.53
HDAC3-209ENST00000486618 PIGPP57054 158 aa5.51□□□□□ -1.53
HDAC3-209ENST00000486618 CD300CQ08708 224 aa5.51□□□□□ -1.53
HDAC3-209ENST00000486618 CD47Q08722 323 aa5.51□□□□□ -1.53
HDAC3-209ENST00000486618 RSU1Q15404 277 aa5.51□□□□□ -1.53
HDAC3-209ENST00000486618 ZNF404Q494X3 552 aa5.51□□□□□ -1.53
HDAC3-209ENST00000486618 RUSC1-AS1Q66K80 236 aa5.51□□□□□ -1.53
HDAC3-209ENST00000486618 DMKNQ6E0U4 476 aaPredicted RBP5.51□□□□□ -1.53
HDAC3-209ENST00000486618 HAGHLQ6PII5 290 aaPredicted RBP5.51□□□□□ -1.53
HDAC3-209ENST00000486618 BAIAP2L2Q6UXY1 529 aa5.51□□□□□ -1.53
HDAC3-209ENST00000486618 Q6ZSR3 168 aa5.51□□□□□ -1.53
HDAC3-209ENST00000486618 Q6ZSV7 163 aa5.51□□□□□ -1.53
HDAC3-209ENST00000486618 C8orf59Q8N0T1 100 aaPredicted RBP5.51□□□□□ -1.53
HDAC3-209ENST00000486618 ABHD12Q8N2K0 398 aa5.51□□□□□ -1.53
HDAC3-209ENST00000486618 SCCPDHQ8NBX0 429 aa5.51□□□□□ -1.53
HDAC3-209ENST00000486618 TCTEX1D2Q8WW35 142 aa5.51□□□□□ -1.53
HDAC3-209ENST00000486618 IL22RA2Q969J5 263 aa5.51□□□□□ -1.53
HDAC3-209ENST00000486618 CMBLQ96DG6 245 aa5.51□□□□□ -1.53
HDAC3-209ENST00000486618 SEH1LQ96EE3 360 aa5.51□□□□□ -1.53
HDAC3-209ENST00000486618 MRAP2Q96G30 205 aa5.51□□□□□ -1.53
HDAC3-209ENST00000486618 DUX3Q96PT4 197 aa5.51□□□□□ -1.53
HDAC3-209ENST00000486618 OR2H1Q9GZK4 316 aa5.51□□□□□ -1.53
HDAC3-209ENST00000486618 CHST5Q9GZS9 411 aa5.51□□□□□ -1.53
HDAC3-209ENST00000486618 SEMA6AQ9H2E6 1030 aa5.51□□□□□ -1.53
HDAC3-209ENST00000486618 NIPAL2Q9H841 368 aa5.51□□□□□ -1.53
HDAC3-209ENST00000486618 MCUBQ9NWR8 336 aa5.51□□□□□ -1.53
HDAC3-209ENST00000486618 SPANXCQ9NY87 97 aa5.51□□□□□ -1.53
HDAC3-209ENST00000486618 SLC25A37Q9NYZ2 338 aa5.51□□□□□ -1.53
HDAC3-209ENST00000486618 OR1A1Q9P1Q5 309 aa5.51□□□□□ -1.53
HDAC3-209ENST00000486618 SIGLEC9Q9Y336 463 aa5.51□□□□□ -1.53
HDAC3-209ENST00000486618 RPL36Q9Y3U8 105 aaKnown RBP5.51□□□□□ -1.53
HDAC3-209ENST00000486618 IGHV1-69DA0A0B4J2H0 117 aa5.5□□□□□ -1.53
HDAC3-209ENST00000486618 CPSF4LA6NMK7 179 aaKnown RBP5.5□□□□□ -1.53
HDAC3-209ENST00000486618 ZAR1LA6NP61 321 aa5.5□□□□□ -1.53
HDAC3-209ENST00000486618 MPTX1A8MV57 137 aa5.5□□□□□ -1.53
HDAC3-209ENST00000486618 KRBOX1C9JBD0 128 aa5.5□□□□□ -1.53
HDAC3-209ENST00000486618 I3L521 148 aa5.5□□□□□ -1.53
HDAC3-209ENST00000486618 M0R143 59 aa5.5□□□□□ -1.53
HDAC3-209ENST00000486618 SLC2A10O95528 541 aa5.5□□□□□ -1.53
HDAC3-209ENST00000486618 IGHV1-69P01742 117 aa5.5□□□□□ -1.53
HDAC3-209ENST00000486618 IGHV4-59P01825 116 aa5.5□□□□□ -1.53
HDAC3-209ENST00000486618 ASAH2BP0C7U1 165 aa5.5□□□□□ -1.53
HDAC3-209ENST00000486618 SMIM18P0DKX4 95 aa5.5□□□□□ -1.53
HDAC3-209ENST00000486618 SLC2A5P22732 501 aa5.5□□□□□ -1.53
HDAC3-209ENST00000486618 DUSP1P28562 367 aa5.5□□□□□ -1.53
HDAC3-209ENST00000486618 CRISP1P54107 249 aa5.5□□□□□ -1.53
HDAC3-209ENST00000486618 OR10A3P58181 314 aa5.5□□□□□ -1.53
HDAC3-209ENST00000486618 TAS2R31P59538 309 aa5.5□□□□□ -1.53
HDAC3-209ENST00000486618 GAGE5Q13069 117 aa5.5□□□□□ -1.53
HDAC3-209ENST00000486618 GAGE6Q13070 117 aa5.5□□□□□ -1.53
HDAC3-209ENST00000486618 UBE2V1Q13404 147 aa5.5□□□□□ -1.53
HDAC3-209ENST00000486618 HERPUD1Q15011 391 aa5.5□□□□□ -1.53
HDAC3-209ENST00000486618 ZNF181Q2M3W8 571 aa5.5□□□□□ -1.53
HDAC3-209ENST00000486618 Q6ZR03 302 aa5.5□□□□□ -1.53
HDAC3-209ENST00000486618 SLC35F2Q8IXU6 374 aa5.5□□□□□ -1.53
HDAC3-209ENST00000486618 ACBD7Q8N6N7 88 aa5.5□□□□□ -1.53
HDAC3-209ENST00000486618 ZNF676Q8N7Q3 588 aa5.5□□□□□ -1.53
HDAC3-209ENST00000486618 PNLDC1Q8NA58 520 aaKnown RBP5.5□□□□□ -1.53
HDAC3-209ENST00000486618 GPR32P1Q8NGA4 272 aa5.5□□□□□ -1.53
HDAC3-209ENST00000486618 ZNF420Q8TAQ5 688 aaPredicted RBP5.5□□□□□ -1.53
HDAC3-209ENST00000486618 HAVCR2Q8TDQ0 301 aa5.5□□□□□ -1.53
HDAC3-209ENST00000486618 NABP1Q96AH0 204 aa5.5□□□□□ -1.53
HDAC3-209ENST00000486618 SORT1Q99523 831 aa5.5□□□□□ -1.53
HDAC3-209ENST00000486618 GFI1Q99684 422 aa5.5□□□□□ -1.53
HDAC3-209ENST00000486618 GINS3Q9BRX5 216 aa5.5□□□□□ -1.53
HDAC3-209ENST00000486618 C20orf27Q9GZN8 174 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms