RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 ZNF555Q8NEP9 628 aa8.95□□□□□ -0.98
HDAC6-219ENST00000476625 CYGBQ8WWM9 190 aa8.95□□□□□ -0.98
HDAC6-219ENST00000476625 SRSF12Q8WXF0 261 aaKnown RBP8.95□□□□□ -0.98
HDAC6-219ENST00000476625 ACOT12Q8WYK0 555 aa8.95□□□□□ -0.98
HDAC6-219ENST00000476625 SNAPC3Q92966 411 aa8.95□□□□□ -0.98
HDAC6-219ENST00000476625 S100A14Q9HCY8 104 aa8.95□□□□□ -0.98
HDAC6-219ENST00000476625 ZC4H2Q9NQZ6 224 aa8.95□□□□□ -0.98
HDAC6-219ENST00000476625 SMPD3Q9NY59 655 aaPredicted RBP8.95□□□□□ -0.98
HDAC6-219ENST00000476625 MLXQ9UH92 298 aa8.95□□□□□ -0.98
HDAC6-219ENST00000476625 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.94□□□□□ -0.98
HDAC6-219ENST00000476625 TRBV6-6A0A0A6YYG2 114 aa8.94□□□□□ -0.98
HDAC6-219ENST00000476625 A0A0B4J203 849 aa8.94□□□□□ -0.98
HDAC6-219ENST00000476625 LINC00473A8K010 186 aa8.94□□□□□ -0.98
HDAC6-219ENST00000476625 J3QRK9 145 aa8.94□□□□□ -0.98
HDAC6-219ENST00000476625 BET1O15155 118 aa8.94□□□□□ -0.98
HDAC6-219ENST00000476625 MPPED1O15442 326 aa8.94□□□□□ -0.98
HDAC6-219ENST00000476625 GSTT2P0CG29 244 aa8.94□□□□□ -0.98
HDAC6-219ENST00000476625 GSTT2BP0CG30 244 aa8.94□□□□□ -0.98
HDAC6-219ENST00000476625 KIR2DS2P43631 304 aa8.94□□□□□ -0.98
HDAC6-219ENST00000476625 TNFRSF9Q07011 255 aa8.94□□□□□ -0.98
HDAC6-219ENST00000476625 PRSS8Q16651 343 aa8.94□□□□□ -0.98
HDAC6-219ENST00000476625 TATDN3Q17R31 274 aa8.94□□□□□ -0.98
HDAC6-219ENST00000476625 OR2B11Q5JQS5 317 aa8.94□□□□□ -0.98
HDAC6-219ENST00000476625 PLAC9Q5JTB6 97 aa8.94□□□□□ -0.98
HDAC6-219ENST00000476625 MOB1BQ7L9L4 216 aa8.94□□□□□ -0.98
HDAC6-219ENST00000476625 PQLC1Q8N2U9 271 aa8.94□□□□□ -0.98
HDAC6-219ENST00000476625 OR2K2Q8NGT1 345 aa8.94□□□□□ -0.98
HDAC6-219ENST00000476625 USMG5Q96IX5 58 aa8.94□□□□□ -0.98
HDAC6-219ENST00000476625 PECRQ9BY49 303 aa8.94□□□□□ -0.98
HDAC6-219ENST00000476625 ZNF430Q9H8G1 570 aaPredicted RBP8.94□□□□□ -0.98
HDAC6-219ENST00000476625 GHRLQ9UBU3 117 aa8.94□□□□□ -0.98
HDAC6-219ENST00000476625 UBQLN2Q9UHD9 624 aa8.94□□□□□ -0.98
HDAC6-219ENST00000476625 KIAA1109Q2LD37 5005 aa8.93□□□□□ -0.98
HDAC6-219ENST00000476625 TRBV9A0A0B4J1U6 114 aa8.93□□□□□ -0.98
HDAC6-219ENST00000476625 E7EUB6 86 aa8.93□□□□□ -0.98
HDAC6-219ENST00000476625 CRYZL1O95825 349 aa8.93□□□□□ -0.98
HDAC6-219ENST00000476625 GNAO1P09471 354 aa8.93□□□□□ -0.98
HDAC6-219ENST00000476625 UBBP0CG47 229 aa8.93□□□□□ -0.98
HDAC6-219ENST00000476625 MYOD1P15172 320 aa8.93□□□□□ -0.98
HDAC6-219ENST00000476625 WNT4P56705 351 aa8.93□□□□□ -0.98
HDAC6-219ENST00000476625 ATP5G2Q06055 141 aa8.93□□□□□ -0.98
HDAC6-219ENST00000476625 C15orf32Q32M92 178 aa8.93□□□□□ -0.98
HDAC6-219ENST00000476625 TMEM177Q53S58 311 aa8.93□□□□□ -0.98
HDAC6-219ENST00000476625 ZFP1Q6P2D0 407 aa8.93□□□□□ -0.98
HDAC6-219ENST00000476625 LYG2Q86SG7 212 aa8.93□□□□□ -0.98
HDAC6-219ENST00000476625 DDB2Q92466 427 aa8.93□□□□□ -0.98
HDAC6-219ENST00000476625 CCDC140Q96MF4 163 aa8.93□□□□□ -0.98
HDAC6-219ENST00000476625 GGTLC1Q9BX51 225 aa8.93□□□□□ -0.98
HDAC6-219ENST00000476625 C12orf4Q9NQ89 552 aa8.93□□□□□ -0.98
HDAC6-219ENST00000476625 IGKV1D-8A0A087WSZ0 117 aa8.92□□□□□ -0.98
HDAC6-219ENST00000476625 A0A1B0GW64 132 aa8.92□□□□□ -0.98
HDAC6-219ENST00000476625 IRGMA1A4Y4 181 aa8.92□□□□□ -0.98
HDAC6-219ENST00000476625 TMEM213A2RRL7 107 aa8.92□□□□□ -0.98
HDAC6-219ENST00000476625 EFCAB10A6NFE3 127 aa8.92□□□□□ -0.98
HDAC6-219ENST00000476625 TRDCB7Z8K6 153 aa8.92□□□□□ -0.98
HDAC6-219ENST00000476625 MYL12BO14950 172 aa8.92□□□□□ -0.98
HDAC6-219ENST00000476625 NDUFB8O95169 186 aa8.92□□□□□ -0.98
HDAC6-219ENST00000476625 SAA1P0DJI8 122 aaPredicted RBP8.92□□□□□ -0.98
HDAC6-219ENST00000476625 SRMP19623 302 aa8.92□□□□□ -0.98
HDAC6-219ENST00000476625 CBLN1P23435 193 aa8.92□□□□□ -0.98
HDAC6-219ENST00000476625 TAS2R43P59537 309 aa8.92□□□□□ -0.98
HDAC6-219ENST00000476625 DEFB135Q30KP9 77 aa8.92□□□□□ -0.98
HDAC6-219ENST00000476625 GLT8D1Q68CQ7 371 aa8.92□□□□□ -0.98
HDAC6-219ENST00000476625 BTNL8Q6UX41 500 aa8.92□□□□□ -0.98
HDAC6-219ENST00000476625 CLEC19AQ6UXS0 136 aa8.92□□□□□ -0.98
HDAC6-219ENST00000476625 LAX1Q8IWV1 398 aa8.92□□□□□ -0.98
HDAC6-219ENST00000476625 VKORC1L1Q8N0U8 176 aa8.92□□□□□ -0.98
HDAC6-219ENST00000476625 NANOGP1Q8N7R0 232 aa8.92□□□□□ -0.98
HDAC6-219ENST00000476625 SETD9Q8NE22 299 aa8.92□□□□□ -0.98
HDAC6-219ENST00000476625 CMSS1Q9BQ75 279 aaKnown RBP8.92□□□□□ -0.98
HDAC6-219ENST00000476625 KCNK7Q9Y2U2 307 aa8.92□□□□□ -0.98
HDAC6-219ENST00000476625 AK6Q9Y3D8 172 aaKnown RBP8.92□□□□□ -0.98
HDAC6-219ENST00000476625 VPS13DQ5THJ4 4388 aa8.91□□□□□ -0.98
HDAC6-219ENST00000476625 LOC102724200A0A096LPH7 203 aaPredicted RBP8.91□□□□□ -0.98
HDAC6-219ENST00000476625 IGHV3-35A0A0C4DH35 117 aa8.91□□□□□ -0.98
HDAC6-219ENST00000476625 FAM223BA6NKX1 122 aa8.91□□□□□ -0.98
HDAC6-219ENST00000476625 FABP7O15540 132 aa8.91□□□□□ -0.98
HDAC6-219ENST00000476625 AIREO43918 545 aa8.91□□□□□ -0.98
HDAC6-219ENST00000476625 S1PR2O95136 353 aa8.91□□□□□ -0.98
HDAC6-219ENST00000476625 BPNT1O95861 308 aa8.91□□□□□ -0.98
HDAC6-219ENST00000476625 PRR20EP86478 221 aa8.91□□□□□ -0.98
HDAC6-219ENST00000476625 PRR20CP86479 221 aa8.91□□□□□ -0.98
HDAC6-219ENST00000476625 PRR20DP86480 221 aa8.91□□□□□ -0.98
HDAC6-219ENST00000476625 PRR20BP86481 221 aa8.91□□□□□ -0.98
HDAC6-219ENST00000476625 PRR20AP86496 221 aa8.91□□□□□ -0.98
HDAC6-219ENST00000476625 TM4SF20Q53R12 229 aa8.91□□□□□ -0.98
HDAC6-219ENST00000476625 CEMP1Q6PRD7 247 aaPredicted RBP8.91□□□□□ -0.98
HDAC6-219ENST00000476625 UNQ9165/PRO28630Q6UXU0 137 aa8.91□□□□□ -0.98
HDAC6-219ENST00000476625 FAM223AQ8IWN6 122 aa8.91□□□□□ -0.98
HDAC6-219ENST00000476625 FAM89BQ8N5H3 189 aa8.91□□□□□ -0.98
HDAC6-219ENST00000476625 OR52B4Q8NGK2 314 aa8.91□□□□□ -0.98
HDAC6-219ENST00000476625 TMEM203Q969S6 136 aa8.91□□□□□ -0.98
HDAC6-219ENST00000476625 TMEM68Q96MH6 324 aa8.91□□□□□ -0.98
HDAC6-219ENST00000476625 PSORS1C1Q9UIG5 152 aa8.91□□□□□ -0.98
HDAC6-219ENST00000476625 ELF5Q9UKW6 265 aaPredicted RBP8.91□□□□□ -0.98
HDAC6-219ENST00000476625 ZNF320A2RRD8 509 aa8.9□□□□□ -0.98
HDAC6-219ENST00000476625 NUPR2A6NF83 97 aa8.9□□□□□ -0.98
HDAC6-219ENST00000476625 TEX22C9J3V5 150 aa8.9□□□□□ -0.98
HDAC6-219ENST00000476625 TUSC2O75896 110 aa8.9□□□□□ -0.98
HDAC6-219ENST00000476625 REG1AP05451 166 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms