RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-211ENST00000475835 TUSC3Q13454 348 aa3.25□□□□□ -1.89
LSM2-211ENST00000475835 OR7A5Q15622 319 aa3.25□□□□□ -1.89
LSM2-211ENST00000475835 MSMO1Q15800 293 aa3.25□□□□□ -1.89
LSM2-211ENST00000475835 ZNF74Q16587 644 aa3.25□□□□□ -1.89
LSM2-211ENST00000475835 C4orf26Q17RF5 130 aa3.25□□□□□ -1.89
LSM2-211ENST00000475835 LINC00303Q3SY05 128 aa3.25□□□□□ -1.89
LSM2-211ENST00000475835 ZNF672Q499Z4 452 aaPredicted RBP3.25□□□□□ -1.89
LSM2-211ENST00000475835 TTC32Q5I0X7 151 aa3.25□□□□□ -1.89
LSM2-211ENST00000475835 MEIG1Q5JSS6 88 aa3.25□□□□□ -1.89
LSM2-211ENST00000475835 ZNF506Q5JVG8 444 aa3.25□□□□□ -1.89
LSM2-211ENST00000475835 FAM72AQ5TYM5 149 aa3.25□□□□□ -1.89
LSM2-211ENST00000475835 FAM72DQ6L9T8 149 aa3.25□□□□□ -1.89
LSM2-211ENST00000475835 ZNF880Q6PDB4 577 aa3.25□□□□□ -1.89
LSM2-211ENST00000475835 MORN3Q6PF18 240 aaPredicted RBP3.25□□□□□ -1.89
LSM2-211ENST00000475835 RASL11AQ6T310 242 aa3.25□□□□□ -1.89
LSM2-211ENST00000475835 AMTNQ6UX39 209 aa3.25□□□□□ -1.89
LSM2-211ENST00000475835 UNQ6126/PRO20091Q6UXV3 157 aa3.25□□□□□ -1.89
LSM2-211ENST00000475835 TMEM64Q6YI46 380 aa3.25□□□□□ -1.89
LSM2-211ENST00000475835 DNM1P46Q6ZS02 220 aa3.25□□□□□ -1.89
LSM2-211ENST00000475835 SHISA6Q6ZSJ9 500 aa3.25□□□□□ -1.89
LSM2-211ENST00000475835 Q6ZVH6 145 aa3.25□□□□□ -1.89
LSM2-211ENST00000475835 RPS27LQ71UM5 84 aaKnown RBP3.25□□□□□ -1.89
LSM2-211ENST00000475835 CBLL1Q75N03 491 aa3.25□□□□□ -1.89
LSM2-211ENST00000475835 FAM19A1Q7Z5A9 133 aa3.25□□□□□ -1.89
LSM2-211ENST00000475835 BCDIN3DQ7Z5W3 292 aaKnown RBP3.25□□□□□ -1.89
LSM2-211ENST00000475835 TMEM179BQ7Z7N9 219 aa3.25□□□□□ -1.89
LSM2-211ENST00000475835 FAM72BQ86X60 149 aa3.25□□□□□ -1.89
LSM2-211ENST00000475835 TDHQ8IZJ6 230 aa3.25□□□□□ -1.89
LSM2-211ENST00000475835 CLDN19Q8N6F1 224 aa3.25□□□□□ -1.89
LSM2-211ENST00000475835 LINC01465Q8N7H1 131 aa3.25□□□□□ -1.89
LSM2-211ENST00000475835 GJC3Q8NFK1 279 aa3.25□□□□□ -1.89
LSM2-211ENST00000475835 OR11H6Q8NGC7 330 aa3.25□□□□□ -1.89
LSM2-211ENST00000475835 OR4C16Q8NGL9 310 aa3.25□□□□□ -1.89
LSM2-211ENST00000475835 SLC25A43Q8WUT9 341 aaPredicted RBP3.25□□□□□ -1.89
LSM2-211ENST00000475835 PPP1R1CQ8WVI7 109 aa3.25□□□□□ -1.89
LSM2-211ENST00000475835 RTN4IP1Q8WWV3 396 aaPredicted RBP3.25□□□□□ -1.89
LSM2-211ENST00000475835 AQP3Q92482 292 aa3.25□□□□□ -1.89
LSM2-211ENST00000475835 NEIL2Q969S2 332 aa3.25□□□□□ -1.89
LSM2-211ENST00000475835 S100A16Q96FQ6 103 aaKnown RBP3.25□□□□□ -1.89
LSM2-211ENST00000475835 ZIC5Q96T25 663 aa3.25□□□□□ -1.89
LSM2-211ENST00000475835 NDC1Q9BTX1 674 aa3.25□□□□□ -1.89
LSM2-211ENST00000475835 SFXN3Q9BWM7 321 aa3.25□□□□□ -1.89
LSM2-211ENST00000475835 SLC25A39Q9BZJ4 359 aaPredicted RBP3.25□□□□□ -1.89
LSM2-211ENST00000475835 TNFRSF12AQ9NP84 129 aa3.25□□□□□ -1.89
LSM2-211ENST00000475835 FGF20Q9NP95 211 aaPredicted RBP3.25□□□□□ -1.89
LSM2-211ENST00000475835 FSCN3Q9NQT6 498 aa3.25□□□□□ -1.89
LSM2-211ENST00000475835 MRPL17Q9NRX2 175 aaKnown RBP3.25□□□□□ -1.89
LSM2-211ENST00000475835 C20orf141Q9NUB4 165 aa3.25□□□□□ -1.89
LSM2-211ENST00000475835 C1orf123Q9NWV4 160 aa3.25□□□□□ -1.89
LSM2-211ENST00000475835 C1RLQ9NZP8 487 aa3.25□□□□□ -1.89
LSM2-211ENST00000475835 KLK11Q9UBX7 282 aa3.25□□□□□ -1.89
LSM2-211ENST00000475835 ZNF257Q9Y2Q1 563 aa3.25□□□□□ -1.89
LSM2-211ENST00000475835 MPC1Q9Y5U8 109 aa3.25□□□□□ -1.89
LSM2-211ENST00000475835 SPCS1Q9Y6A9 102 aa3.25□□□□□ -1.89
LSM2-211ENST00000475835 HCFC1P51610 2035 aa3.25□□□□□ -1.89
LSM2-211ENST00000475835 COL4A4P53420 1690 aaPredicted RBP3.24□□□□□ -1.89
LSM2-211ENST00000475835 SMIM28A0A1B0GU29 152 aa3.24□□□□□ -1.89
LSM2-211ENST00000475835 FAM231BA6NCW3 169 aa3.24□□□□□ -1.89
LSM2-211ENST00000475835 ZAR1LA6NP61 321 aa3.24□□□□□ -1.89
LSM2-211ENST00000475835 GGTLC3B5MD39 225 aa3.24□□□□□ -1.89
LSM2-211ENST00000475835 CCDC179H3BU77 68 aa3.24□□□□□ -1.89
LSM2-211ENST00000475835 IFNL4K9M1U5 179 aa3.24□□□□□ -1.89
LSM2-211ENST00000475835 ISLRO14498 428 aa3.24□□□□□ -1.89
LSM2-211ENST00000475835 AGFG2O95081 481 aa3.24□□□□□ -1.89
LSM2-211ENST00000475835 IGHG1P01857 330 aa3.24□□□□□ -1.89
LSM2-211ENST00000475835 HBE1P02100 147 aa3.24□□□□□ -1.89
LSM2-211ENST00000475835 TTRP02766 147 aa3.24□□□□□ -1.89
LSM2-211ENST00000475835 FGF1P05230 155 aa3.24□□□□□ -1.89
LSM2-211ENST00000475835 SRP19P09132 144 aaKnown RBP3.24□□□□□ -1.89
LSM2-211ENST00000475835 VPREB1P12018 145 aa3.24□□□□□ -1.89
LSM2-211ENST00000475835 CD38P28907 300 aa3.24□□□□□ -1.89
LSM2-211ENST00000475835 OPRM1P35372 400 aa3.24□□□□□ -1.89
LSM2-211ENST00000475835 RBMXP38159 391 aaKnown RBP3.24□□□□□ -1.89
LSM2-211ENST00000475835 RPL13AP40429 203 aaKnown RBP3.24□□□□□ -1.89
LSM2-211ENST00000475835 ASIPP42127 132 aa3.24□□□□□ -1.89
LSM2-211ENST00000475835 ZNF157P51786 506 aaPredicted RBP3.24□□□□□ -1.89
LSM2-211ENST00000475835 SLC25A1P53007 311 aa3.24□□□□□ -1.89
LSM2-211ENST00000475835 PCBP3P57721 371 aaKnown RBP3.24□□□□□ -1.89
LSM2-211ENST00000475835 MTPNP58546 118 aa3.24□□□□□ -1.89
LSM2-211ENST00000475835 TMEM258P61165 79 aa3.24□□□□□ -1.89
LSM2-211ENST00000475835 TGFBR3Q03167 851 aa3.24□□□□□ -1.89
LSM2-211ENST00000475835 CD69Q07108 199 aa3.24□□□□□ -1.89
LSM2-211ENST00000475835 MYBPHQ13203 477 aa3.24□□□□□ -1.89
LSM2-211ENST00000475835 VGLL4Q14135 290 aa3.24□□□□□ -1.89
LSM2-211ENST00000475835 RNPS1Q15287 305 aaKnown RBP3.24□□□□□ -1.89
LSM2-211ENST00000475835 ACSF3Q4G176 576 aaPredicted RBP3.24□□□□□ -1.89
LSM2-211ENST00000475835 MPV17L2Q567V2 206 aa3.24□□□□□ -1.89
LSM2-211ENST00000475835 HLA-DQA1Q5Y7H0 255 aa3.24□□□□□ -1.89
LSM2-211ENST00000475835 LEG1Q6P5S2 330 aa3.24□□□□□ -1.89
LSM2-211ENST00000475835 SLC25A34Q6PIV7 304 aa3.24□□□□□ -1.89
LSM2-211ENST00000475835 ZNF322Q6U7Q0 402 aaPredicted RBP3.24□□□□□ -1.89
LSM2-211ENST00000475835 LCN15Q6UWW0 184 aa3.24□□□□□ -1.89
LSM2-211ENST00000475835 ANKRD37Q7Z713 158 aa3.24□□□□□ -1.89
LSM2-211ENST00000475835 SLC22A18ASQ8N1D0 253 aa3.24□□□□□ -1.89
LSM2-211ENST00000475835 TMEM86AQ8N2M4 240 aa3.24□□□□□ -1.89
LSM2-211ENST00000475835 C10orf111Q8N326 155 aa3.24□□□□□ -1.89
LSM2-211ENST00000475835 ZNF615Q8N8J6 731 aa3.24□□□□□ -1.89
LSM2-211ENST00000475835 Q8N976 141 aa3.24□□□□□ -1.89
LSM2-211ENST00000475835 ZFP62Q8NB50 900 aaPredicted RBP3.24□□□□□ -1.89
LSM2-211ENST00000475835 SUMF1Q8NBK3 374 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms