RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 HLA-DQA2P01906 255 aa4.31□□□□□ -1.72
TMEM39A-206ENST00000473684 DBIP07108 87 aaKnown RBP4.31□□□□□ -1.72
TMEM39A-206ENST00000473684 GATA2P23769 480 aaPredicted RBP4.31□□□□□ -1.72
TMEM39A-206ENST00000473684 HTR1DP28221 377 aa4.31□□□□□ -1.72
TMEM39A-206ENST00000473684 CA7P43166 264 aa4.31□□□□□ -1.72
TMEM39A-206ENST00000473684 TIRAPP58753 221 aa4.31□□□□□ -1.72
TMEM39A-206ENST00000473684 GNG3P63215 75 aa4.31□□□□□ -1.72
TMEM39A-206ENST00000473684 B4GALNT1Q00973 533 aa4.31□□□□□ -1.72
TMEM39A-206ENST00000473684 TAF10Q12962 218 aa4.31□□□□□ -1.72
TMEM39A-206ENST00000473684 ZNF726P1Q15940 193 aa4.31□□□□□ -1.72
TMEM39A-206ENST00000473684 TMEM97Q5BJF2 176 aa4.31□□□□□ -1.72
TMEM39A-206ENST00000473684 C1orf140Q5VVS0 124 aa4.31□□□□□ -1.72
TMEM39A-206ENST00000473684 UEVLDQ8IX04 471 aa4.31□□□□□ -1.72
TMEM39A-206ENST00000473684 SLC22A24Q8N4F4 322 aa4.31□□□□□ -1.72
TMEM39A-206ENST00000473684 SCGB1C1Q8TD33 95 aa4.31□□□□□ -1.72
TMEM39A-206ENST00000473684 LSM10Q969L4 123 aaKnown RBP4.31□□□□□ -1.72
TMEM39A-206ENST00000473684 GPX7Q96SL4 187 aaPredicted RBP4.31□□□□□ -1.72
TMEM39A-206ENST00000473684 VN1R3Q9BXE9 311 aa4.31□□□□□ -1.72
TMEM39A-206ENST00000473684 ELOVL3Q9HB03 270 aa4.31□□□□□ -1.72
TMEM39A-206ENST00000473684 SPANXB1Q9NS25 103 aaPredicted RBP4.31□□□□□ -1.72
TMEM39A-206ENST00000473684 CES1P1Q9UKY3 287 aa4.31□□□□□ -1.72
TMEM39A-206ENST00000473684 ZNF257Q9Y2Q1 563 aa4.31□□□□□ -1.72
TMEM39A-206ENST00000473684 CENPVL1A0A0U1RR11 272 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 CD300LBA8K4G0 201 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 F8W1H4 67 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 H3BUT2 72 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 NKX2-8O15522 239 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 HIST1H1EP10412 219 aaKnown RBP4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 ZNF20P17024 532 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 IGFBP2P18065 325 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 PTGER1P34995 402 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 NKX2-1P43699 371 aaPredicted RBP4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 TCL1AP56279 114 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 GRB2P62993 217 aaKnown RBP4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 TGFBR3Q03167 851 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 MEF2CQ06413 473 aaPredicted RBP4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 LY6KQ17RY6 165 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 LRRC75BQ2VPJ9 315 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 BEAN1Q3B7T3 259 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 LCN12Q6JVE5 192 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 TRAT1Q6PIZ9 186 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 LYZL2Q7Z4W2 148 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 OR51T1Q8NGJ9 327 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 OR5D14Q8NGL3 314 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 TSKUQ8WUA8 353 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 PP6455Q8WZ26 134 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 LHX4Q969G2 390 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 OR2A5Q96R48 311 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 C16orf70Q9BSU1 422 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 CHRNA10Q9GZZ6 450 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 SIGLEC8Q9NYZ4 499 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 VPREB3Q9UKI3 123 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 A0A0D9SEW6 157 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 CASTOR2A6NHX0 329 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 ISLRO14498 428 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 CRXO43186 299 aaPredicted RBP4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 ADAM20O43506 726 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 PLXNA2O75051 1894 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 LDB3O75112 727 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 TGFAP01135 160 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 SPINK8P0C7L1 97 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 ATP1B2P14415 290 aaPredicted RBP4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 FABP6P51161 128 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 SNU13P55769 128 aaKnown RBP4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 ZNF90Q03938 601 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 Q56UQ5 140 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 DCAF12Q5T6F0 453 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 ABHD17BQ5VST6 288 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 ACSM6Q6P461 480 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 ADAMTSL5Q6ZMM2 481 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 C1orf210Q8IVY1 113 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 DOCK8Q8NF50 2099 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 OR10D3Q8NH80 312 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 KCNG3Q8TAE7 436 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 OR51E1Q8TCB6 317 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 TIMM29Q9BSF4 260 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 C19orf24Q9BVV8 132 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 GGTLC1Q9BX51 225 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 PECRQ9BY49 303 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 OR2D2Q9H210 308 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 PELI2Q9HAT8 420 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 SCRT2Q9NQ03 307 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 TMEM160Q9NX00 188 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 IL36BQ9NZH7 164 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 THAP10Q9P2Z0 257 aaPredicted RBP4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 DKK2Q9UBU2 259 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 PTRH2Q9Y3E5 179 aaKnown RBP4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 MYO16Q9Y6X6 1858 aa4.3□□□□□ -1.72
TMEM39A-206ENST00000473684 A0A0B4J2E0 115 aa4.29□□□□□ -1.72
TMEM39A-206ENST00000473684 A0A1B0GX12 115 aa4.29□□□□□ -1.72
TMEM39A-206ENST00000473684 SNURFLB1AK76 121 aa4.29□□□□□ -1.72
TMEM39A-206ENST00000473684 M0QXV9 152 aa4.29□□□□□ -1.72
TMEM39A-206ENST00000473684 GPR1P46091 355 aa4.29□□□□□ -1.72
TMEM39A-206ENST00000473684 ARFRP1Q13795 201 aa4.29□□□□□ -1.72
TMEM39A-206ENST00000473684 CDKN3Q16667 212 aa4.29□□□□□ -1.72
TMEM39A-206ENST00000473684 NRN1LQ496H8 165 aa4.29□□□□□ -1.72
TMEM39A-206ENST00000473684 ABCA11PQ4W5N1 156 aa4.29□□□□□ -1.72
TMEM39A-206ENST00000473684 TPRG1Q6ZUI0 275 aa4.29□□□□□ -1.72
TMEM39A-206ENST00000473684 SPATA12Q7Z6I5 190 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms