RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 OR5P3Q8WZ94 311 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 RBPMSQ93062 196 aaKnown RBP2.24□□□□□ -2.05
CD46-213ENST00000471987 ISOC1Q96CN7 298 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 ACY3Q96HD9 319 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 SEC22AQ96IW7 307 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 LINC00477Q96M19 166 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 TP53RKQ96S44 253 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 KCTD14Q9BQ13 255 aaPredicted RBP2.24□□□□□ -2.05
CD46-213ENST00000471987 NDFIP1Q9BT67 221 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 TMEM70Q9BUB7 260 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 PBDC1Q9BVG4 233 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 ZNF471Q9BX82 626 aaPredicted RBP2.24□□□□□ -2.05
CD46-213ENST00000471987 C20orf27Q9GZN8 174 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 LPAR5Q9H1C0 372 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 POPDC3Q9HBV1 291 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 UQCC1Q9NVA1 299 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 C14orf105Q9NVL8 296 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 SCN3BQ9NY72 215 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 NAT8BQ9UHF3 227 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 ST3GAL6Q9Y274 331 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 LAMTOR2Q9Y2Q5 125 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 HDGFL3Q9Y3E1 203 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 PCYT1BQ9Y5K3 369 aaPredicted RBP2.24□□□□□ -2.05
CD46-213ENST00000471987 LRRIQ1Q96JM4 1722 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 FYCO1Q9BQS8 1478 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 FANCD2Q9BXW9 1451 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 SBF1O95248 1867 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 NSD3Q9BZ95 1437 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 TRAPPC8Q9Y2L5 1435 aa2.24□□□□□ -2.05
CD46-213ENST00000471987 DIP2BQ9P265 1576 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 VWA8A3KMH1 1905 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 PKD1L2Q7Z442 2459 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 ZC3H13Q5T200 1668 aaKnown RBP2.23□□□□□ -2.05
CD46-213ENST00000471987 IQSEC2Q5JU85 1478 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 TEX50A0A1B0GTY4 177 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 A0A1B0GWB2 263 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 SIGLEC16A6NMB1 481 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 FABP5P3A8MUU1 101 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 C1orf196B1AJZ1 125 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 EEF1E1-BLOC1S5C9J1V9 151 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 H7C1C5 153 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 EEF1E1O43324 174 aaKnown RBP2.23□□□□□ -2.05
CD46-213ENST00000471987 DHRS3O75911 302 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 PIAS1O75925 651 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 YIF1AO95070 293 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 IFNA7P01567 189 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 IGHG2P01859 326 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 HLA-DQB2P05538 268 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 ATF1P18846 271 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 CRHBPP24387 322 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 S100A2P29034 98 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 BLVRBP30043 206 aaPredicted RBP2.23□□□□□ -2.05
CD46-213ENST00000471987 MIPP30301 263 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 TSPOP30536 169 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 BRS3P32247 399 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 ETV6P41212 452 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 REG1BP48304 166 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 EMP1P54849 157 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 TAS2R20P59543 309 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 LCN6P62502 163 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 GNG5P63218 68 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 SLC35A1P78382 337 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 HIST1H1AQ02539 215 aaPredicted RBP2.23□□□□□ -2.05
CD46-213ENST00000471987 SLC25A11Q02978 314 aaKnown RBP2.23□□□□□ -2.05
CD46-213ENST00000471987 ZNF763Q0D2J5 394 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 INCA1Q0VD86 236 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 FZD2Q14332 565 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 BATFQ16520 125 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 TMEM241Q24JQ0 296 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 ZNF684Q5T5D7 378 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 Q6ZSR6 202 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 FAM183BPQ6ZVS7 135 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 NEGR1Q7Z3B1 354 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 NAA40Q86UY6 237 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 SNX29P2Q8IUI4 249 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 TCTEX1D1Q8N7M0 179 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 SLC35G3Q8N808 338 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 CYB561D1Q8N8Q1 229 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 NKAPP1Q8N9T2 125 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 GPR26Q8NDV2 337 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 OR11H6Q8NGC7 330 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 OR13C8Q8NGS7 320 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 OR2G3Q8NGZ4 309 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 OR1S1Q8NH92 325 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 MBD3L1Q8WWY6 194 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 RXFP2Q8WXD0 754 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 ARPC1AQ92747 370 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 PLEKHB2Q96CS7 222 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 BMFQ96LC9 184 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 MGLLQ99685 303 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 PITX2Q99697 317 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 HDHD3Q9BSH5 251 aaPredicted RBP2.23□□□□□ -2.05
CD46-213ENST00000471987 EMC6Q9BV81 110 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 OR51I2Q9H344 312 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 CDC42EP4Q9H3Q1 356 aaKnown RBP2.23□□□□□ -2.05
CD46-213ENST00000471987 Q9H521 79 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 MRPL27Q9P0M9 148 aaKnown RBP2.23□□□□□ -2.05
CD46-213ENST00000471987 ANXA10Q9UJ72 324 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 MMP17Q9ULZ9 603 aa2.23□□□□□ -2.05
CD46-213ENST00000471987 TNFSF18Q9UNG2 199 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms