RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 CSN2P05814 226 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 SFTA3P0C7M3 94 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 TRGC1P0CF51 173 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 IGLC1P0CG04 106 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 PGA3P0DJD8 388 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 ZNF17P17021 662 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 PSMB1P20618 241 aaKnown RBP2.56□□□□□ -2
VPS13D-203ENST00000466732 USF1P22415 310 aaPredicted RBP2.56□□□□□ -2
VPS13D-203ENST00000466732 NPY1RP25929 384 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 ATP6V0CP27449 155 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 HTR1DP28221 377 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 HTR1EP28566 365 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 FGF9P31371 208 aaPredicted RBP2.56□□□□□ -2
VPS13D-203ENST00000466732 PRDX2P32119 198 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 KLK7P49862 253 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 SULT1A1P50225 295 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 DIO3P55073 304 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 OR12D2P58182 307 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 RAB10P61026 200 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 GNB2P62879 340 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 HIST1H3AP68431 136 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 SLC35A1P78382 337 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 TMEM267Q0VDI3 215 aaPredicted RBP2.56□□□□□ -2
VPS13D-203ENST00000466732 OR2F1Q13607 317 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 EDDM3AQ14507 147 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 PDGFRLQ15198 375 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 OR8B8Q15620 311 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 SNRNP35Q16560 246 aaKnown RBP2.56□□□□□ -2
VPS13D-203ENST00000466732 DCAF4L1Q3SXM0 396 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 TRMT12Q53H54 448 aaKnown RBP2.56□□□□□ -2
VPS13D-203ENST00000466732 TMEM97Q5BJF2 176 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 CLEC12AQ5QGZ9 265 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 DCST2Q5T1A1 773 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 GLT8D1Q68CQ7 371 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 ZNF57Q68EA5 555 aaPredicted RBP2.56□□□□□ -2
VPS13D-203ENST00000466732 ZFAND6Q6FIF0 208 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 EPGNQ6UW88 154 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 UNQ5815/PRO19632Q6UWF5 114 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 TEX43Q6ZNM6 134 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 CLEC20AQ6ZU45 233 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 ASCL5Q7RTU5 278 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 C9orf40Q8IXQ3 194 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 CA13Q8N1Q1 262 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 UMODL1-AS1Q8N2C9 162 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 EID2Q8N6I1 236 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 ZFP41Q8N8Y5 198 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 OR5D16Q8NGK9 328 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 SFXN5Q8TD22 340 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 DOK4Q8TEW6 326 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 TMEM37Q8WXS4 190 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 PSMF1Q92530 271 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 APH1AQ96BI3 265 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 SMIM19Q96E16 107 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 DNAJA3Q96EY1 480 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 ACY3Q96HD9 319 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 TSPAN32Q96QS1 320 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 TRIB3Q96RU7 358 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 TBX15Q96SF7 602 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 MBOAT4Q96T53 435 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 GPR22Q99680 433 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 HSPB9Q9BQS6 159 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 DERL1Q9BUN8 251 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 HES7Q9BYE0 225 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 SMIM3Q9BZL3 60 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 FAM124BQ9H5Z6 455 aaPredicted RBP2.56□□□□□ -2
VPS13D-203ENST00000466732 ENY2Q9NPA8 101 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 TMEM100Q9NV29 134 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 SPANXCQ9NY87 97 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 HS3ST2Q9Y278 367 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 SIGLEC7Q9Y286 467 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 HDGFL3Q9Y3E1 203 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 A2ML1A8K2U0 1454 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 DIP2CQ9Y2E4 1556 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 BCORQ6W2J9 1755 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 MYLKQ15746 1914 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 NUP205Q92621 2012 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 A0A087WUU8 490 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 A0A087WWC5 75 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 A0A087X0T9 212 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 A0A0G2JLM5 398 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 TINCRA0A1B0GVN0 87 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 KANTRA0A1W2PQU2 76 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 A0A1W2PRD5 423 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 GGT3PA6NGU5 568 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 FAM159BA6NKW6 160 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 FAM166BA8MTA8 275 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 FABP5P3A8MUU1 101 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 ZNF705FA8MVS1 300 aaPredicted RBP2.55□□□□□ -2
VPS13D-203ENST00000466732 ZNF670-ZNF695F2Z2N8 137 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 F5H5K5 113 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 F5H6K3 240 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.55□□□□□ -2
VPS13D-203ENST00000466732 K7EN84 100 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 K7EPK0 472 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 AGPAT2O15120 278 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 SIPA1L3O60292 1781 aaPredicted RBP2.55□□□□□ -2
VPS13D-203ENST00000466732 MCM3APO60318 1980 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 ZNF861PO60384 105 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 ALOX12BO75342 701 aa2.55□□□□□ -2
VPS13D-203ENST00000466732 HSBP1O75506 76 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms