RNA–Protein interactions for RNA: ENST00000464316.5

CCNL1-204, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-204ENST00000464316 MTCH1Q9NZJ7 389 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 HSPB8Q9UJY1 196 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 OR51B2Q9Y5P1 312 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 GON4LQ3T8J9 2241 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 LOC105371242A0A075B767 164 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 IGHV5-51A0A0C4DH38 117 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 hCG_38984A0A1B0GV85 526 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 NPIPB11E5RHQ5 1161 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 H3BMH7 237 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 M0QZ24 198 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 SLC17A3O00476 420 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 ISLRO14498 428 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 SH2D1BO14796 132 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 SPINK4O60575 86 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 IGKV1D-33P01593 117 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 IGKV1-33P01594 117 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 LINC00271P0C7V0 271 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 STAG3L2P0CL84 134 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 STAG3L3P0CL85 134 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 ARL14EPLP0DKL9 152 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 CRYGSP22914 178 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 APOBEC3AP31941 199 aaPredicted RBP3.28□□□□□ -1.88
CCNL1-204ENST00000464316 GFRA1P56159 465 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 GNG3P63215 75 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 HIST1H1AQ02539 215 aaPredicted RBP3.28□□□□□ -1.88
CCNL1-204ENST00000464316 CEACAM21Q3KPI0 293 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 KIAA1644Q3SXP7 199 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 SAMD13Q5VXD3 122 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 Q6ZRM9 215 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 ATOH7Q8N100 152 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 DEFB125Q8N687 156 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 TMEM251Q8N6I4 163 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 WDR31Q8NA23 367 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 Q8NFD4 153 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 OR2M3Q8NG83 312 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 ABHD3Q8WU67 409 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.28□□□□□ -1.88
CCNL1-204ENST00000464316 FOXB1Q99853 325 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 CLEC7AQ9BXN2 247 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 COL25A1Q9BXS0 654 aaPredicted RBP3.28□□□□□ -1.88
CCNL1-204ENST00000464316 NPVFQ9HCQ7 196 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 POLDIP2Q9Y2S7 368 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 YTHDF2Q9Y5A9 579 aaKnown RBP3.28□□□□□ -1.88
CCNL1-204ENST00000464316 IGKV1-27A0A075B6S5 117 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 TRAV38-1A0A0B4J264 116 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 A0A0G2JRQ6 117 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 A0A1W2PR80 420 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 IZUMO1RA6ND01 250 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 OR4C46A6NHA9 309 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 SYNGR3O43761 229 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 CLDN14O95500 239 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 IGKV1-5P01602 117 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 OR10J4P0C629 311 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 SCGB1A1P11684 91 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 GCHFRP30047 84 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 OTX2P32243 289 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 KIR2DL1P43626 348 aaPredicted RBP3.27□□□□□ -1.89
CCNL1-204ENST00000464316 ZNF83P51522 516 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 OR1D5P58170 312 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 PLP1P60201 277 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 MPV17L2Q567V2 206 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 IBA57Q5T440 356 aaKnown RBP3.27□□□□□ -1.89
CCNL1-204ENST00000464316 HAPLN4Q86UW8 402 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 KMT5CQ86Y97 462 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 ZIC4Q8N9L1 334 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 OR5A1Q8NGJ0 315 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 TSKUQ8WUA8 353 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 GALMQ96C23 342 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 SPACA9Q96E40 222 aaPredicted RBP3.27□□□□□ -1.89
CCNL1-204ENST00000464316 OR2D2Q9H210 308 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 TMEM38BQ9NVV0 291 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 TECRQ9NZ01 308 aaKnown RBP3.27□□□□□ -1.89
CCNL1-204ENST00000464316 MPC1Q9Y5U8 109 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 SRCAPQ6ZRS2 3230 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 SCO2A0A1W2PP80 73 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 IFNL4K9M1U5 179 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 LEPROTL1O95214 131 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 S100A7P31151 101 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 REG1BP48304 166 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 GPM6AP51674 278 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 MFAP2P55001 183 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.27□□□□□ -1.89
CCNL1-204ENST00000464316 C1orf185Q5T7R7 199 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 PQLC2Q6ZP29 291 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 FAM19A2Q8N3H0 131 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 OR2T6Q8NHC8 308 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 C19orf24Q9BVV8 132 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 PRDM14Q9GZV8 571 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 SEC16AO15027 2179 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 SHANK1Q9Y566 2161 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 DOCK8Q8NF50 2099 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 LOC102724200A0A096LPH7 203 aaPredicted RBP3.27□□□□□ -1.89
CCNL1-204ENST00000464316 IGHV3-20A0A0C4DH32 117 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 FAM181BA6NEQ2 426 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 PGPEP1LA6NFU8 196 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 E9PLN8 166 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 CDIPTO14735 213 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 ZNF207O43670 478 aaKnown RBP3.27□□□□□ -1.89
CCNL1-204ENST00000464316 RHBDL1O75783 438 aa3.27□□□□□ -1.89
CCNL1-204ENST00000464316 HLA-DRB1P01911 266 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms