RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 ATP6V0CP27449 155 aa10.13□□□□□ -0.79
COL27A1-202ENST00000451716 BRS3P32247 399 aa10.13□□□□□ -0.79
COL27A1-202ENST00000451716 BATFQ16520 125 aa10.13□□□□□ -0.79
COL27A1-202ENST00000451716 BHLHA15Q7RTS1 189 aaPredicted RBP10.13□□□□□ -0.79
COL27A1-202ENST00000451716 ZNF808Q8N4W9 903 aaPredicted RBP10.13□□□□□ -0.79
COL27A1-202ENST00000451716 DRAM1Q8N682 238 aa10.13□□□□□ -0.79
COL27A1-202ENST00000451716 OR52L2PQ8NGH6 319 aa10.13□□□□□ -0.79
COL27A1-202ENST00000451716 MBNL3Q9NUK0 354 aaKnown RBP10.13□□□□□ -0.79
COL27A1-202ENST00000451716 RNF115Q9Y4L5 304 aa10.13□□□□□ -0.79
COL27A1-202ENST00000451716 DOCK11Q5JSL3 2073 aa10.13□□□□□ -0.79
COL27A1-202ENST00000451716 CLEC18AA5D8T8 446 aa10.12□□□□□ -0.79
COL27A1-202ENST00000451716 C12orf77C9JDV5 145 aa10.12□□□□□ -0.79
COL27A1-202ENST00000451716 CGAP01215 116 aa10.12□□□□□ -0.79
COL27A1-202ENST00000451716 IGKV1-5P01602 117 aa10.12□□□□□ -0.79
COL27A1-202ENST00000451716 IAPPP10997 89 aa10.12□□□□□ -0.79
COL27A1-202ENST00000451716 GCH1P30793 250 aa10.12□□□□□ -0.79
COL27A1-202ENST00000451716 APOBEC3AP31941 199 aaPredicted RBP10.12□□□□□ -0.79
COL27A1-202ENST00000451716 PPP1CCP36873 323 aaKnown RBP10.12□□□□□ -0.79
COL27A1-202ENST00000451716 GABRA2P47869 451 aa10.12□□□□□ -0.79
COL27A1-202ENST00000451716 ERVFC1-1P60608 527 aa10.12□□□□□ -0.79
COL27A1-202ENST00000451716 TMEM267Q0VDI3 215 aaPredicted RBP10.12□□□□□ -0.79
COL27A1-202ENST00000451716 SLAQ13239 276 aa10.12□□□□□ -0.79
COL27A1-202ENST00000451716 ZNF585BQ52M93 769 aa10.12□□□□□ -0.79
COL27A1-202ENST00000451716 CLEC18CQ8NCF0 446 aa10.12□□□□□ -0.79
COL27A1-202ENST00000451716 OR2G3Q8NGZ4 309 aa10.12□□□□□ -0.79
COL27A1-202ENST00000451716 RFESDQ8TAC1 157 aa10.12□□□□□ -0.79
COL27A1-202ENST00000451716 DCTN5Q9BTE1 182 aa10.12□□□□□ -0.79
COL27A1-202ENST00000451716 CXXC4Q9H2H0 198 aa10.12□□□□□ -0.79
COL27A1-202ENST00000451716 HES4Q9HCC6 221 aa10.12□□□□□ -0.79
COL27A1-202ENST00000451716 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.12□□□□□ -0.79
COL27A1-202ENST00000451716 CEACAM4O75871 244 aa10.12□□□□□ -0.79
COL27A1-202ENST00000451716 NBEAP1P0C6P0 100 aa10.12□□□□□ -0.79
COL27A1-202ENST00000451716 SNCAP37840 140 aa10.12□□□□□ -0.79
COL27A1-202ENST00000451716 TFPI2P48307 235 aa10.12□□□□□ -0.79
COL27A1-202ENST00000451716 LINC00205P59089 165 aa10.12□□□□□ -0.79
COL27A1-202ENST00000451716 RPL19P84098 196 aaKnown RBP10.12□□□□□ -0.79
COL27A1-202ENST00000451716 ZNF718Q3SXZ3 478 aa10.12□□□□□ -0.79
COL27A1-202ENST00000451716 AWAT1Q58HT5 328 aa10.12□□□□□ -0.79
COL27A1-202ENST00000451716 ACP7Q6ZNF0 438 aa10.12□□□□□ -0.79
COL27A1-202ENST00000451716 MOB1BQ7L9L4 216 aa10.12□□□□□ -0.79
COL27A1-202ENST00000451716 ZNF295-AS1Q8N0V1 137 aa10.12□□□□□ -0.79
COL27A1-202ENST00000451716 OR2Z1Q8NG97 314 aa10.12□□□□□ -0.79
COL27A1-202ENST00000451716 LYPD6BQ8NI32 183 aa10.12□□□□□ -0.79
COL27A1-202ENST00000451716 PLPPR2Q96GM1 343 aa10.12□□□□□ -0.79
COL27A1-202ENST00000451716 COQ2Q96H96 371 aa10.12□□□□□ -0.79
COL27A1-202ENST00000451716 C20orf24Q9BUV8 137 aa10.12□□□□□ -0.79
COL27A1-202ENST00000451716 EIF5A2Q9GZV4 153 aaKnown RBP10.12□□□□□ -0.79
COL27A1-202ENST00000451716 WIPI2Q9Y4P8 454 aa10.12□□□□□ -0.79
COL27A1-202ENST00000451716 ELOA3CA0A087WX78 387 aaPredicted RBP10.12□□□□□ -0.79
COL27A1-202ENST00000451716 IGHV3-43A0A0B4J1X8 118 aa10.12□□□□□ -0.79
COL27A1-202ENST00000451716 FAM157AC9JC47 383 aa10.12□□□□□ -0.79
COL27A1-202ENST00000451716 KLK10O43240 276 aa10.12□□□□□ -0.79
COL27A1-202ENST00000451716 IL6RP08887 468 aaPredicted RBP10.12□□□□□ -0.79
COL27A1-202ENST00000451716 IGHV3-43DP0DP04 118 aa10.12□□□□□ -0.79
COL27A1-202ENST00000451716 SSTR5P35346 364 aa10.12□□□□□ -0.79
COL27A1-202ENST00000451716 GLIPR1P48060 266 aa10.12□□□□□ -0.79
COL27A1-202ENST00000451716 DVL1P1P54792 670 aaPredicted RBP10.12□□□□□ -0.79
COL27A1-202ENST00000451716 NKX6-1P78426 367 aaPredicted RBP10.12□□□□□ -0.79
COL27A1-202ENST00000451716 HMGN3Q15651 99 aa10.12□□□□□ -0.79
COL27A1-202ENST00000451716 LTC4SQ16873 150 aa10.12□□□□□ -0.79
COL27A1-202ENST00000451716 SPRNQ5BIV9 151 aa10.12□□□□□ -0.79
COL27A1-202ENST00000451716 C1orf162Q8NEQ5 155 aaPredicted RBP10.12□□□□□ -0.79
COL27A1-202ENST00000451716 PRSS33Q8NF86 280 aa10.12□□□□□ -0.79
COL27A1-202ENST00000451716 DUXBA0A1W2PPF3 345 aa10.11□□□□□ -0.79
COL27A1-202ENST00000451716 TMEM30CPA0ZSE6 113 aa10.11□□□□□ -0.79
COL27A1-202ENST00000451716 DEFB108AA8MXU0 73 aa10.11□□□□□ -0.79
COL27A1-202ENST00000451716 NPIPB11E5RHQ5 1161 aa10.11□□□□□ -0.79
COL27A1-202ENST00000451716 M0R036 132 aa10.11□□□□□ -0.79
COL27A1-202ENST00000451716 RAMP3O60896 148 aa10.11□□□□□ -0.79
COL27A1-202ENST00000451716 PITX3O75364 302 aa10.11□□□□□ -0.79
COL27A1-202ENST00000451716 IGLV1-44P01699 117 aa10.11□□□□□ -0.79
COL27A1-202ENST00000451716 COL10A1Q03692 680 aa10.11□□□□□ -0.79
COL27A1-202ENST00000451716 ZNF705AQ6ZN79 300 aaPredicted RBP10.11□□□□□ -0.79
COL27A1-202ENST00000451716 SLC25A31Q9H0C2 315 aa10.11□□□□□ -0.79
COL27A1-202ENST00000451716 OR2D2Q9H210 308 aa10.11□□□□□ -0.79
COL27A1-202ENST00000451716 KCNIP1Q9NZI2 227 aa10.11□□□□□ -0.79
COL27A1-202ENST00000451716 KIAA1324LA8MWY0 1029 aaPredicted RBP10.11□□□□□ -0.79
COL27A1-202ENST00000451716 M0R1B8 84 aa10.11□□□□□ -0.79
COL27A1-202ENST00000451716 HIST1H2BKO60814 126 aa10.11□□□□□ -0.79
COL27A1-202ENST00000451716 HBZP02008 142 aa10.11□□□□□ -0.79
COL27A1-202ENST00000451716 HIST1H2BJP06899 126 aa10.11□□□□□ -0.79
COL27A1-202ENST00000451716 HIST1H2BOP23527 126 aa10.11□□□□□ -0.79
COL27A1-202ENST00000451716 HIST1H2BBP33778 126 aa10.11□□□□□ -0.79
COL27A1-202ENST00000451716 HIST1H2BDP58876 126 aa10.11□□□□□ -0.79
COL27A1-202ENST00000451716 HIST1H2BCP62807 126 aa10.11□□□□□ -0.79
COL27A1-202ENST00000451716 CCL20P78556 96 aa10.11□□□□□ -0.79
COL27A1-202ENST00000451716 EDDM3AQ14507 147 aa10.11□□□□□ -0.79
COL27A1-202ENST00000451716 ZNF266Q14584 549 aa10.11□□□□□ -0.79
COL27A1-202ENST00000451716 GUK1Q16774 197 aa10.11□□□□□ -0.79
COL27A1-202ENST00000451716 HIST2H2BEQ16778 126 aa10.11□□□□□ -0.79
COL27A1-202ENST00000451716 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.11□□□□□ -0.79
COL27A1-202ENST00000451716 ZNF474Q6S9Z5 364 aaPredicted RBP10.11□□□□□ -0.79
COL27A1-202ENST00000451716 HIST1H2BHQ93079 126 aa10.11□□□□□ -0.79
COL27A1-202ENST00000451716 IL22RA2Q969J5 263 aa10.11□□□□□ -0.79
COL27A1-202ENST00000451716 GALMQ96C23 342 aa10.11□□□□□ -0.79
COL27A1-202ENST00000451716 C5orf30Q96GV9 206 aa10.11□□□□□ -0.79
COL27A1-202ENST00000451716 HIST1H2BNQ99877 126 aa10.11□□□□□ -0.79
COL27A1-202ENST00000451716 HIST1H2BMQ99879 126 aa10.11□□□□□ -0.79
COL27A1-202ENST00000451716 FAM215AQ9Y5M1 114 aa10.11□□□□□ -0.79
COL27A1-202ENST00000451716 KALRNO60229 2985 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms