RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 ZG16O60844 167 aa10.42□□□□□ -0.74
TCOF1-205ENST00000439160 TFF1P04155 84 aa10.42□□□□□ -0.74
TCOF1-205ENST00000439160 SPCS3P61009 180 aa10.42□□□□□ -0.74
TCOF1-205ENST00000439160 BSXQ3C1V8 233 aa10.42□□□□□ -0.74
TCOF1-205ENST00000439160 POC1AQ8NBT0 407 aa10.42□□□□□ -0.74
TCOF1-205ENST00000439160 OR13A1Q8NGR1 328 aa10.42□□□□□ -0.74
TCOF1-205ENST00000439160 PLXNA2O75051 1894 aa10.42□□□□□ -0.74
TCOF1-205ENST00000439160 NDUFA2O43678 99 aa10.42□□□□□ -0.74
TCOF1-205ENST00000439160 SULT1A2P50226 295 aa10.42□□□□□ -0.74
TCOF1-205ENST00000439160 RPL39P5Q59GN2 51 aa10.42□□□□□ -0.74
TCOF1-205ENST00000439160 OR4C12Q96R67 309 aa10.42□□□□□ -0.74
TCOF1-205ENST00000439160 RTBDNQ9BSG5 229 aaPredicted RBP10.42□□□□□ -0.74
TCOF1-205ENST00000439160 VAX2Q9UIW0 290 aa10.42□□□□□ -0.74
TCOF1-205ENST00000439160 PPIAL4CA0A0B4J2A2 164 aa10.42□□□□□ -0.74
TCOF1-205ENST00000439160 MSGN1A6NI15 193 aa10.42□□□□□ -0.74
TCOF1-205ENST00000439160 PPIAL4GP0DN37 164 aa10.42□□□□□ -0.74
TCOF1-205ENST00000439160 RPL27AP46776 148 aaKnown RBP10.42□□□□□ -0.74
TCOF1-205ENST00000439160 ID4P47928 161 aa10.42□□□□□ -0.74
TCOF1-205ENST00000439160 POM121Q96HA1 1249 aa10.42□□□□□ -0.74
TCOF1-205ENST00000439160 TLNRD1Q9H1K6 362 aa10.42□□□□□ -0.74
TCOF1-205ENST00000439160 IGKV1-12A0A0C4DH73 117 aa10.41□□□□□ -0.74
TCOF1-205ENST00000439160 IQCF6A8MYZ5 107 aa10.41□□□□□ -0.74
TCOF1-205ENST00000439160 IGKV1D-12P01611 117 aa10.41□□□□□ -0.74
TCOF1-205ENST00000439160 ECSCRQ19T08 205 aa10.41□□□□□ -0.74
TCOF1-205ENST00000439160 RNF144BQ7Z419 303 aa10.41□□□□□ -0.74
TCOF1-205ENST00000439160 ABHD12Q8N2K0 398 aa10.41□□□□□ -0.74
TCOF1-205ENST00000439160 TCTEX1D1Q8N7M0 179 aa10.41□□□□□ -0.74
TCOF1-205ENST00000439160 TMEM204Q9BSN7 226 aa10.41□□□□□ -0.74
TCOF1-205ENST00000439160 LYRM2Q9NU23 88 aaPredicted RBP10.41□□□□□ -0.74
TCOF1-205ENST00000439160 CLCF1Q9UBD9 225 aa10.41□□□□□ -0.74
TCOF1-205ENST00000439160 GTF3C1Q12789 2109 aa10.41□□□□□ -0.74
TCOF1-205ENST00000439160 A0A0A6YYD4 124 aa10.41□□□□□ -0.74
TCOF1-205ENST00000439160 CTXND1A0A1B0GTU2 59 aa10.41□□□□□ -0.74
TCOF1-205ENST00000439160 B9A039 149 aa10.41□□□□□ -0.74
TCOF1-205ENST00000439160 M0QZ24 198 aa10.41□□□□□ -0.74
TCOF1-205ENST00000439160 APOBEC3AP31941 199 aaPredicted RBP10.41□□□□□ -0.74
TCOF1-205ENST00000439160 GALR1P47211 349 aa10.41□□□□□ -0.74
TCOF1-205ENST00000439160 B3GALT5-AS1P59052 145 aa10.41□□□□□ -0.74
TCOF1-205ENST00000439160 RPL8P62917 257 aaKnown RBP10.41□□□□□ -0.74
TCOF1-205ENST00000439160 TNFRSF9Q07011 255 aa10.41□□□□□ -0.74
TCOF1-205ENST00000439160 NPVFQ9HCQ7 196 aa10.41□□□□□ -0.74
TCOF1-205ENST00000439160 FBLN5Q9UBX5 448 aa10.41□□□□□ -0.74
TCOF1-205ENST00000439160 IFNL4K9M1U5 179 aa10.41□□□□□ -0.74
TCOF1-205ENST00000439160 FABP4P15090 132 aa10.41□□□□□ -0.74
TCOF1-205ENST00000439160 WNT5AP41221 380 aa10.41□□□□□ -0.74
TCOF1-205ENST00000439160 MDS2Q8NDY4 140 aa10.41□□□□□ -0.74
TCOF1-205ENST00000439160 CHRDL1Q9BU40 450 aa10.41□□□□□ -0.74
TCOF1-205ENST00000439160 SEC11CQ9BY50 192 aa10.41□□□□□ -0.74
TCOF1-205ENST00000439160 TMEM167BQ9NRX6 74 aa10.41□□□□□ -0.74
TCOF1-205ENST00000439160 TMEM106BQ9NUM4 274 aa10.41□□□□□ -0.74
TCOF1-205ENST00000439160 IGKV1D-8A0A087WSZ0 117 aa10.4□□□□□ -0.74
TCOF1-205ENST00000439160 MUC1P15941 1255 aaPredicted RBP10.4□□□□□ -0.74
TCOF1-205ENST00000439160 MC5RP33032 325 aa10.4□□□□□ -0.74
TCOF1-205ENST00000439160 DENND4CQ5VZ89 1909 aa10.4□□□□□ -0.74
TCOF1-205ENST00000439160 CCDC144NLQ6NUI1 221 aa10.4□□□□□ -0.74
TCOF1-205ENST00000439160 PDPNQ86YL7 162 aa10.4□□□□□ -0.74
TCOF1-205ENST00000439160 PARD6AQ9NPB6 346 aa10.4□□□□□ -0.74
TCOF1-205ENST00000439160 MMP9P14780 707 aa10.4□□□□□ -0.74
TCOF1-205ENST00000439160 CLEC2AQ6UVW9 174 aa10.4□□□□□ -0.74
TCOF1-205ENST00000439160 PLPPR1Q8TBJ4 325 aa10.4□□□□□ -0.74
TCOF1-205ENST00000439160 MRPL30Q8TCC3 161 aaKnown RBP10.4□□□□□ -0.74
TCOF1-205ENST00000439160 FAM157CP0CG43 387 aa10.4□□□□□ -0.74
TCOF1-205ENST00000439160 SERF2P84101 59 aa10.4□□□□□ -0.74
TCOF1-205ENST00000439160 ATRAIDQ6UW56 229 aa10.4□□□□□ -0.74
TCOF1-205ENST00000439160 FAM210BQ96KR6 192 aa10.4□□□□□ -0.74
TCOF1-205ENST00000439160 FAM103A1Q9BTL3 118 aaKnown RBP10.4□□□□□ -0.74
TCOF1-205ENST00000439160 PRO1933Q9H354 126 aa10.4□□□□□ -0.74
TCOF1-205ENST00000439160 PIEZO1Q92508 2521 aa10.4□□□□□ -0.75
TCOF1-205ENST00000439160 IGKV3-7A0A075B6H7 116 aa10.4□□□□□ -0.75
TCOF1-205ENST00000439160 C20orf202A1L168 122 aa10.4□□□□□ -0.75
TCOF1-205ENST00000439160 XKRY2A2RUG3 117 aa10.4□□□□□ -0.75
TCOF1-205ENST00000439160 ZNF729A6NN14 1252 aaPredicted RBP10.4□□□□□ -0.75
TCOF1-205ENST00000439160 TGOLN2O43493 480 aa10.4□□□□□ -0.75
TCOF1-205ENST00000439160 IL18BPO95998 194 aa10.4□□□□□ -0.75
TCOF1-205ENST00000439160 CD8AP01732 235 aa10.4□□□□□ -0.75
TCOF1-205ENST00000439160 MMP7P09237 267 aaPredicted RBP10.4□□□□□ -0.75
TCOF1-205ENST00000439160 OR10J1P30954 320 aa10.4□□□□□ -0.75
TCOF1-205ENST00000439160 SRP14P37108 136 aaKnown RBP10.4□□□□□ -0.75
TCOF1-205ENST00000439160 KIR2DL2P43627 348 aaPredicted RBP10.4□□□□□ -0.75
TCOF1-205ENST00000439160 FHITP49789 147 aa10.4□□□□□ -0.75
TCOF1-205ENST00000439160 FAM89BQ8N5H3 189 aa10.4□□□□□ -0.75
TCOF1-205ENST00000439160 SH3BGRL3Q9H299 93 aa10.4□□□□□ -0.75
TCOF1-205ENST00000439160 MANBALQ9NQG1 85 aa10.4□□□□□ -0.75
TCOF1-205ENST00000439160 WASHC3Q9Y3C0 194 aa10.4□□□□□ -0.75
TCOF1-205ENST00000439160 LOC105371267A0A1B0GV96 52 aa10.39□□□□□ -0.75
TCOF1-205ENST00000439160 PGA5P0DJD9 388 aa10.39□□□□□ -0.75
TCOF1-205ENST00000439160 AARDQ4LEZ3 155 aa10.39□□□□□ -0.75
TCOF1-205ENST00000439160 RNFT1Q5M7Z0 435 aa10.39□□□□□ -0.75
TCOF1-205ENST00000439160 OR8I2Q8N0Y5 310 aa10.39□□□□□ -0.75
TCOF1-205ENST00000439160 FAM216AQ8WUB2 273 aa10.39□□□□□ -0.75
TCOF1-205ENST00000439160 PNRC2Q9NPJ4 139 aaKnown RBP10.39□□□□□ -0.75
TCOF1-205ENST00000439160 PTPRQQ9UMZ3 2332 aa10.39□□□□□ -0.75
TCOF1-205ENST00000439160 H3BQ15 152 aa10.39□□□□□ -0.75
TCOF1-205ENST00000439160 DLK1P80370 383 aa10.39□□□□□ -0.75
TCOF1-205ENST00000439160 LILRB1Q8NHL6 650 aaPredicted RBP10.39□□□□□ -0.75
TCOF1-205ENST00000439160 NRIP2Q9BQI9 281 aa10.39□□□□□ -0.75
TCOF1-205ENST00000439160 METTL1Q9UBP6 276 aaKnown RBP10.39□□□□□ -0.75
TCOF1-205ENST00000439160 TUBD1Q9UJT1 453 aa10.39□□□□□ -0.75
TCOF1-205ENST00000439160 HSPE1P61604 102 aaKnown RBP10.39□□□□□ -0.75
TCOF1-205ENST00000439160 LY6DQ14210 128 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms