RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 GNG7O60262 68 aa12.9□□□□□ -0.35
TSC2-206ENST00000439117 PRSS53Q2L4Q9 553 aa12.9□□□□□ -0.35
TSC2-206ENST00000439117 A0A0J9YW62 118 aa12.89□□□□□ -0.35
TSC2-206ENST00000439117 CDIPTO14735 213 aa12.89□□□□□ -0.35
TSC2-206ENST00000439117 EMP1P54849 157 aa12.89□□□□□ -0.35
TSC2-206ENST00000439117 HOXA4Q00056 320 aaPredicted RBP12.89□□□□□ -0.35
TSC2-206ENST00000439117 Q5PR19 223 aa12.89□□□□□ -0.35
TSC2-206ENST00000439117 VCX2Q9H322 139 aa12.89□□□□□ -0.35
TSC2-206ENST00000439117 C19orf67A6NJJ6 358 aa12.89□□□□□ -0.35
TSC2-206ENST00000439117 ZNF841Q6ZN19 808 aa12.89□□□□□ -0.35
TSC2-206ENST00000439117 FAM169BQ8N8A8 192 aa12.89□□□□□ -0.35
TSC2-206ENST00000439117 HYPMO75409 117 aa12.89□□□□□ -0.35
TSC2-206ENST00000439117 CTSBP07858 339 aa12.89□□□□□ -0.35
TSC2-206ENST00000439117 AMELYQ99218 206 aa12.89□□□□□ -0.35
TSC2-206ENST00000439117 IL36RNQ9UBH0 155 aa12.89□□□□□ -0.35
TSC2-206ENST00000439117 AMMECR1Q9Y4X0 333 aaPredicted RBP12.89□□□□□ -0.35
TSC2-206ENST00000439117 A0A0G2JK05 382 aa12.89□□□□□ -0.35
TSC2-206ENST00000439117 NKX2-8O15522 239 aa12.89□□□□□ -0.35
TSC2-206ENST00000439117 TRAV14DV4A0A0A6YYC5 116 aa12.88□□□□□ -0.35
TSC2-206ENST00000439117 FGF16O43320 207 aa12.88□□□□□ -0.35
TSC2-206ENST00000439117 PGLYRP1O75594 196 aaPredicted RBP12.88□□□□□ -0.35
TSC2-206ENST00000439117 IL4P05112 153 aa12.88□□□□□ -0.35
TSC2-206ENST00000439117 CD3EP07766 207 aa12.88□□□□□ -0.35
TSC2-206ENST00000439117 FGF12P61328 243 aa12.88□□□□□ -0.35
TSC2-206ENST00000439117 FUT5Q11128 374 aa12.88□□□□□ -0.35
TSC2-206ENST00000439117 RCC1LQ96I51 464 aaKnown RBP12.88□□□□□ -0.35
TSC2-206ENST00000439117 SOSTQ9BQB4 213 aa12.88□□□□□ -0.35
TSC2-206ENST00000439117 ZNF236Q9UL36 1845 aa12.88□□□□□ -0.35
TSC2-206ENST00000439117 LINC00614P0C842 121 aa12.88□□□□□ -0.35
TSC2-206ENST00000439117 FBXW9Q5XUX1 488 aa12.88□□□□□ -0.35
TSC2-206ENST00000439117 ABCA7Q8IZY2 2146 aa12.88□□□□□ -0.35
TSC2-206ENST00000439117 ZNF385AQ96PM9 386 aaKnown RBP12.88□□□□□ -0.35
TSC2-206ENST00000439117 CHRNA10Q9GZZ6 450 aa12.88□□□□□ -0.35
TSC2-206ENST00000439117 SDF2L1Q9HCN8 221 aa12.88□□□□□ -0.35
TSC2-206ENST00000439117 TMSB15BA0A087X1C1 80 aa12.88□□□□□ -0.35
TSC2-206ENST00000439117 TMEM189A5PLL7 270 aa12.88□□□□□ -0.35
TSC2-206ENST00000439117 TMEM14DPA8MWL7 114 aa12.88□□□□□ -0.35
TSC2-206ENST00000439117 LMX1BO60663 402 aa12.88□□□□□ -0.35
TSC2-206ENST00000439117 PRNTQ86SH4 94 aa12.88□□□□□ -0.35
TSC2-206ENST00000439117 CALHM1Q8IU99 346 aa12.88□□□□□ -0.35
TSC2-206ENST00000439117 CCL17Q92583 94 aa12.88□□□□□ -0.35
TSC2-206ENST00000439117 HARBI1Q96MB7 349 aa12.88□□□□□ -0.35
TSC2-206ENST00000439117 HIST1H2BKO60814 126 aa12.88□□□□□ -0.35
TSC2-206ENST00000439117 IGHV3-13P01766 116 aa12.88□□□□□ -0.35
TSC2-206ENST00000439117 IGHV3-7P01780 117 aa12.88□□□□□ -0.35
TSC2-206ENST00000439117 HIST1H2BJP06899 126 aa12.88□□□□□ -0.35
TSC2-206ENST00000439117 ZNF735P0CB33 412 aa12.88□□□□□ -0.35
TSC2-206ENST00000439117 HIST1H2BOP23527 126 aa12.88□□□□□ -0.35
TSC2-206ENST00000439117 HIST1H2BBP33778 126 aa12.88□□□□□ -0.35
TSC2-206ENST00000439117 HIST1H2BDP58876 126 aa12.88□□□□□ -0.35
TSC2-206ENST00000439117 HIST1H2BCP62807 126 aa12.88□□□□□ -0.35
TSC2-206ENST00000439117 HIST2H2BEQ16778 126 aa12.88□□□□□ -0.35
TSC2-206ENST00000439117 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.88□□□□□ -0.35
TSC2-206ENST00000439117 TMEM170AQ8WVE7 144 aa12.88□□□□□ -0.35
TSC2-206ENST00000439117 HIST1H2BHQ93079 126 aa12.88□□□□□ -0.35
TSC2-206ENST00000439117 HIST1H2BNQ99877 126 aa12.88□□□□□ -0.35
TSC2-206ENST00000439117 HIST1H2BMQ99879 126 aa12.88□□□□□ -0.35
TSC2-206ENST00000439117 DERL1Q9BUN8 251 aa12.88□□□□□ -0.35
TSC2-206ENST00000439117 WNT10AQ9GZT5 417 aa12.88□□□□□ -0.35
TSC2-206ENST00000439117 RIF1Q5UIP0 2472 aaKnown RBP12.87□□□□□ -0.35
TSC2-206ENST00000439117 TRAV38-1A0A0B4J264 116 aa12.87□□□□□ -0.35
TSC2-206ENST00000439117 GOSR1O95249 250 aa12.87□□□□□ -0.35
TSC2-206ENST00000439117 ARF6P62330 175 aa12.87□□□□□ -0.35
TSC2-206ENST00000439117 FAM216AQ8WUB2 273 aa12.87□□□□□ -0.35
TSC2-206ENST00000439117 SPCS1Q9Y6A9 102 aa12.87□□□□□ -0.35
TSC2-206ENST00000439117 PSME4Q14997 1843 aa12.87□□□□□ -0.35
TSC2-206ENST00000439117 CEACAM3P40198 252 aa12.87□□□□□ -0.35
TSC2-206ENST00000439117 FGFRL1Q8N441 504 aa12.87□□□□□ -0.35
TSC2-206ENST00000439117 C19orf24Q9BVV8 132 aa12.87□□□□□ -0.35
TSC2-206ENST00000439117 EFEMP2O95967 443 aa12.87□□□□□ -0.35
TSC2-206ENST00000439117 NUTF2P61970 127 aaKnown RBP12.87□□□□□ -0.35
TSC2-206ENST00000439117 FXYD3Q14802 87 aa12.87□□□□□ -0.35
TSC2-206ENST00000439117 LRRC75BQ2VPJ9 315 aa12.87□□□□□ -0.35
TSC2-206ENST00000439117 FBLN7Q53RD9 439 aa12.87□□□□□ -0.35
TSC2-206ENST00000439117 SPANXN1Q5VSR9 72 aa12.87□□□□□ -0.35
TSC2-206ENST00000439117 MIC13Q5XKP0 118 aa12.87□□□□□ -0.35
TSC2-206ENST00000439117 AMMECR1LQ6DCA0 310 aa12.87□□□□□ -0.35
TSC2-206ENST00000439117 MAP1LC3AQ9H492 121 aa12.87□□□□□ -0.35
TSC2-206ENST00000439117 CLEC5AQ9NY25 188 aa12.87□□□□□ -0.35
TSC2-206ENST00000439117 SOX21Q9Y651 276 aaPredicted RBP12.87□□□□□ -0.35
TSC2-206ENST00000439117 BTCP35070 178 aa12.87□□□□□ -0.35
TSC2-206ENST00000439117 NEUROG1Q92886 237 aa12.87□□□□□ -0.35
TSC2-206ENST00000439117 CTHRC1Q96CG8 243 aa12.87□□□□□ -0.35
TSC2-206ENST00000439117 SFXN3Q9BWM7 321 aa12.87□□□□□ -0.35
TSC2-206ENST00000439117 ASCL3Q9NQ33 180 aa12.87□□□□□ -0.35
TSC2-206ENST00000439117 TMEM106BQ9NUM4 274 aa12.87□□□□□ -0.35
TSC2-206ENST00000439117 IL36BQ9NZH7 164 aa12.87□□□□□ -0.35
TSC2-206ENST00000439117 OR51B2Q9Y5P1 312 aa12.87□□□□□ -0.35
TSC2-206ENST00000439117 IGLV1-36A0A0B4J1U3 117 aa12.86□□□□□ -0.35
TSC2-206ENST00000439117 TRAV39A0A0B4J263 110 aa12.86□□□□□ -0.35
TSC2-206ENST00000439117 FAM27BQ5VT28 67 aa12.86□□□□□ -0.35
TSC2-206ENST00000439117 FAM222BQ8WU58 562 aa12.86□□□□□ -0.35
TSC2-206ENST00000439117 WFDC6Q9BQY6 131 aa12.86□□□□□ -0.35
TSC2-206ENST00000439117 HIGD1AQ9Y241 93 aa12.86□□□□□ -0.35
TSC2-206ENST00000439117 PIKFYVEQ9Y2I7 2098 aa12.86□□□□□ -0.35
TSC2-206ENST00000439117 DLEU1O43261 78 aa12.86□□□□□ -0.35
TSC2-206ENST00000439117 ARL14EPLP0DKL9 152 aa12.86□□□□□ -0.35
TSC2-206ENST00000439117 TCF24Q7RTU0 167 aa12.86□□□□□ -0.35
TSC2-206ENST00000439117 BEND2Q8NDZ0 799 aa12.86□□□□□ -0.35
TSC2-206ENST00000439117 ZNF430Q9H8G1 570 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms