RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 C11orf98E9PRG8 122 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 HSD17B6O14756 317 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 GEMIN2O14893 280 aaKnown RBP2.08□□□□□ -2.08
VPS41-206ENST00000418457 TCAPO15273 167 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 SOCS1O15524 211 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 CYB5BO43169 146 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 SOX15O60248 233 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 TSPAN2O60636 221 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 HIST1H2BKO60814 126 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 YIF1AO95070 293 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 TNFP01375 233 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 CLPSP04118 112 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 IGKV3-11P04433 115 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 HPNP05981 417 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 HIST1H2BJP06899 126 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 SRP19P09132 144 aaKnown RBP2.08□□□□□ -2.08
VPS41-206ENST00000418457 OR9G9P0C7N8 305 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 METTL15P1P0C7V9 234 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 PGA3P0DJD8 388 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 ZNF728P0DKX0 622 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 OR13C7P0DN81 318 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 SLC25A6P12236 298 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 FABP4P15090 132 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 SERPINA2P20848 420 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 HNRNPA2B1P22626 353 aaKnown RBP2.08□□□□□ -2.08
VPS41-206ENST00000418457 HIST1H2BOP23527 126 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 UCP1P25874 307 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 S100GP29377 79 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 BLVRBP30043 206 aaPredicted RBP2.08□□□□□ -2.08
VPS41-206ENST00000418457 IL2RGP31785 369 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 HIST1H2BBP33778 126 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 AKR1C3P42330 323 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 GUCA1AP43080 201 aaPredicted RBP2.08□□□□□ -2.08
VPS41-206ENST00000418457 OR3A4PP47883 348 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 DHPSP49366 369 aaPredicted RBP2.08□□□□□ -2.08
VPS41-206ENST00000418457 PIGPP57054 158 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 HIST1H2BDP58876 126 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 TAS2R30P59541 319 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 RND3P61587 244 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 NUTF2P61970 127 aaKnown RBP2.08□□□□□ -2.08
VPS41-206ENST00000418457 LSM6P62312 80 aaKnown RBP2.08□□□□□ -2.08
VPS41-206ENST00000418457 HIST1H2BCP62807 126 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 RANP62826 216 aaKnown RBP2.08□□□□□ -2.08
VPS41-206ENST00000418457 DEFB103AP81534 67 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 EWSR1Q01844 656 aaKnown RBP eCLIP2.08□□□□□ -2.08
VPS41-206ENST00000418457 PLCXD2Q0VAA5 305 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 IL24Q13007 206 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 PRDX4Q13162 271 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 GPM6BQ13491 265 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 RUNX3Q13761 415 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 FZD2Q14332 565 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 GAMTQ14353 236 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 SLC10A1Q14973 349 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 OR1C1Q15619 314 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 KISS1Q15726 138 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 HIST2H2BEQ16778 126 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 IQCJQ1A5X6 159 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 MPV17LQ2QL34 196 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 ACOT6Q3I5F7 207 aaPredicted RBP2.08□□□□□ -2.08
VPS41-206ENST00000418457 SLC22A6Q4U2R8 563 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.08□□□□□ -2.08
VPS41-206ENST00000418457 Q6ZSR3 168 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 TMPPEQ6ZT21 453 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 SLC25A26Q70HW3 274 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 ABHD12BQ7Z5M8 362 aaPredicted RBP2.08□□□□□ -2.08
VPS41-206ENST00000418457 DPPA2Q7Z7J5 298 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 STHQ8IWL8 128 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 H1FOOQ8IZA3 346 aaPredicted RBP2.08□□□□□ -2.08
VPS41-206ENST00000418457 OR5AS1Q8N127 324 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 TMEM156Q8N614 296 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 GATSQ8NAP1 163 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 APCDD1LQ8NCL9 501 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 TMEM104Q8NE00 496 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 NOXO1Q8NFA2 376 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 OR10AD1Q8NGE0 317 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 OR10A7Q8NGE5 316 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 OR4D5Q8NGN0 318 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 OR2G3Q8NGZ4 309 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 FAM213BQ8TBF2 198 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 OR51E1Q8TCB6 317 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 GPR119Q8TDV5 335 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 Q8WTZ3 238 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 RTN4IP1Q8WWV3 396 aaPredicted RBP2.08□□□□□ -2.08
VPS41-206ENST00000418457 OR1E3Q8WZA6 343 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 HIST1H2BHQ93079 126 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 TSLPQ969D9 159 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 IL22RA2Q969J5 263 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 ADIPOR1Q96A54 375 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 PINX1Q96BK5 328 aaKnown RBP2.08□□□□□ -2.08
VPS41-206ENST00000418457 SLC25A36Q96CQ1 311 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 CMBLQ96DG6 245 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 ADAT3Q96EY9 351 aaPredicted RBP2.08□□□□□ -2.08
VPS41-206ENST00000418457 C5orf30Q96GV9 206 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 PACRGQ96M98 296 aaPredicted RBP2.08□□□□□ -2.08
VPS41-206ENST00000418457 C1orf147Q96MC9 270 aaPredicted RBP2.08□□□□□ -2.08
VPS41-206ENST00000418457 TGM7Q96PF1 710 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 TECTBQ96PL2 329 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 ATP6V0BQ99437 205 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 ATP5SQ99766 215 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 HIST1H2BNQ99877 126 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms