RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 PSME4Q14997 1843 aa11.07□□□□□ -0.64
SCN1B-202ENST00000415950 IGKV1-9A0A0C4DH69 117 aa11.07□□□□□ -0.64
SCN1B-202ENST00000415950 ISLRO14498 428 aa11.07□□□□□ -0.64
SCN1B-202ENST00000415950 CRXO43186 299 aaPredicted RBP11.07□□□□□ -0.64
SCN1B-202ENST00000415950 HIST1H1BP16401 226 aaKnown RBP11.07□□□□□ -0.64
SCN1B-202ENST00000415950 CLEC1BQ9P126 229 aa11.07□□□□□ -0.64
SCN1B-202ENST00000415950 DMRT1Q9Y5R6 373 aa11.07□□□□□ -0.64
SCN1B-202ENST00000415950 LOC285556D6RIA3 1793 aa11.07□□□□□ -0.64
SCN1B-202ENST00000415950 TCF20Q9UGU0 1960 aaKnown RBP11.07□□□□□ -0.64
SCN1B-202ENST00000415950 C9JQL5 133 aa11.07□□□□□ -0.64
SCN1B-202ENST00000415950 PROB1E7EW31 1015 aa11.07□□□□□ -0.64
SCN1B-202ENST00000415950 LIFP15018 202 aa11.07□□□□□ -0.64
SCN1B-202ENST00000415950 PRRX1P54821 245 aa11.07□□□□□ -0.64
SCN1B-202ENST00000415950 DEFB124Q8NES8 71 aa11.07□□□□□ -0.64
SCN1B-202ENST00000415950 Q96M66 194 aa11.07□□□□□ -0.64
SCN1B-202ENST00000415950 NUDT16L1Q9BRJ7 211 aaKnown RBP11.07□□□□□ -0.64
SCN1B-202ENST00000415950 IL36RNQ9UBH0 155 aa11.07□□□□□ -0.64
SCN1B-202ENST00000415950 C5orf63A6NC05 138 aa11.07□□□□□ -0.64
SCN1B-202ENST00000415950 PRF1P14222 555 aa11.07□□□□□ -0.64
SCN1B-202ENST00000415950 KIR2DS2P43631 304 aa11.07□□□□□ -0.64
SCN1B-202ENST00000415950 PCP4P48539 62 aa11.07□□□□□ -0.64
SCN1B-202ENST00000415950 ZP4Q12836 540 aa11.07□□□□□ -0.64
SCN1B-202ENST00000415950 FAM27BQ5VT28 67 aa11.07□□□□□ -0.64
SCN1B-202ENST00000415950 HCP5Q6MZN7 132 aa11.07□□□□□ -0.64
SCN1B-202ENST00000415950 TAF15Q92804 592 aaKnown RBP eCLIP11.07□□□□□ -0.64
SCN1B-202ENST00000415950 VWA8A3KMH1 1905 aa11.06□□□□□ -0.64
SCN1B-202ENST00000415950 SPATA45Q537H7 98 aa11.06□□□□□ -0.64
SCN1B-202ENST00000415950 ASPHD2Q6ICH7 369 aa11.06□□□□□ -0.64
SCN1B-202ENST00000415950 ZNF788Q6ZQV5 615 aa11.06□□□□□ -0.64
SCN1B-202ENST00000415950 FGFRL1Q8N441 504 aa11.06□□□□□ -0.64
SCN1B-202ENST00000415950 OR2V2Q96R30 315 aa11.06□□□□□ -0.64
SCN1B-202ENST00000415950 NPVFQ9HCQ7 196 aa11.06□□□□□ -0.64
SCN1B-202ENST00000415950 A0A0A6YYD4 124 aa11.06□□□□□ -0.64
SCN1B-202ENST00000415950 A6NDN8 102 aa11.06□□□□□ -0.64
SCN1B-202ENST00000415950 CRYABP02511 175 aaKnown RBP11.06□□□□□ -0.64
SCN1B-202ENST00000415950 MGPP08493 103 aa11.06□□□□□ -0.64
SCN1B-202ENST00000415950 TRA2AQ13595 282 aaKnown RBP eCLIP11.06□□□□□ -0.64
SCN1B-202ENST00000415950 CALHM1Q8IU99 346 aa11.06□□□□□ -0.64
SCN1B-202ENST00000415950 ZNF502Q8TBZ5 544 aa11.06□□□□□ -0.64
SCN1B-202ENST00000415950 SAP30LQ9HAJ7 183 aa11.06□□□□□ -0.64
SCN1B-202ENST00000415950 GBF1Q92538 1859 aa11.06□□□□□ -0.64
SCN1B-202ENST00000415950 H7C2G1 150 aa11.06□□□□□ -0.64
SCN1B-202ENST00000415950 FOXC1Q12948 553 aa11.06□□□□□ -0.64
SCN1B-202ENST00000415950 PAXXQ9BUH6 204 aa11.06□□□□□ -0.64
SCN1B-202ENST00000415950 DDA1Q9BW61 102 aa11.06□□□□□ -0.64
SCN1B-202ENST00000415950 PRNDQ9UKY0 176 aa11.06□□□□□ -0.64
SCN1B-202ENST00000415950 PGLYRP1O75594 196 aaPredicted RBP11.05□□□□□ -0.64
SCN1B-202ENST00000415950 IGFBP3P17936 291 aaPredicted RBP11.05□□□□□ -0.64
SCN1B-202ENST00000415950 PQLC2Q6ZP29 291 aa11.05□□□□□ -0.64
SCN1B-202ENST00000415950 OR1L8Q8NGR8 309 aa11.05□□□□□ -0.64
SCN1B-202ENST00000415950 A0A0U1RQV5 110 aa11.05□□□□□ -0.64
SCN1B-202ENST00000415950 LDLRAD4O15165 306 aa11.05□□□□□ -0.64
SCN1B-202ENST00000415950 HBZP02008 142 aa11.05□□□□□ -0.64
SCN1B-202ENST00000415950 SLC25A45Q8N413 288 aa11.05□□□□□ -0.64
SCN1B-202ENST00000415950 OR1L1Q8NH94 360 aa11.05□□□□□ -0.64
SCN1B-202ENST00000415950 SLC25A33Q9BSK2 321 aa11.05□□□□□ -0.64
SCN1B-202ENST00000415950 GAGE10A6NGK3 116 aa11.05□□□□□ -0.64
SCN1B-202ENST00000415950 EPOPA6NHQ4 379 aa11.05□□□□□ -0.64
SCN1B-202ENST00000415950 SUPT4H1P63272 117 aaKnown RBP11.05□□□□□ -0.64
SCN1B-202ENST00000415950 MMDQ15546 238 aa11.05□□□□□ -0.64
SCN1B-202ENST00000415950 SMDT1Q9H4I9 107 aa11.05□□□□□ -0.64
SCN1B-202ENST00000415950 LPAR2Q9HBW0 351 aa11.05□□□□□ -0.64
SCN1B-202ENST00000415950 RPL31P62899 125 aaKnown RBP11.05□□□□□ -0.64
SCN1B-202ENST00000415950 PLAURQ03405 335 aa11.05□□□□□ -0.64
SCN1B-202ENST00000415950 IBA57Q5T440 356 aaKnown RBP11.05□□□□□ -0.64
SCN1B-202ENST00000415950 WFDC3Q8IUB2 231 aa11.05□□□□□ -0.64
SCN1B-202ENST00000415950 SELENOHQ8IZQ5 122 aaKnown RBP11.05□□□□□ -0.64
SCN1B-202ENST00000415950 IER2Q9BTL4 223 aa11.05□□□□□ -0.64
SCN1B-202ENST00000415950 FGF16O43320 207 aa11.04□□□□□ -0.64
SCN1B-202ENST00000415950 WISP1O95388 367 aa11.04□□□□□ -0.64
SCN1B-202ENST00000415950 CA2P00918 260 aa11.04□□□□□ -0.64
SCN1B-202ENST00000415950 AGAP20933 346 aa11.04□□□□□ -0.64
SCN1B-202ENST00000415950 COL10A1Q03692 680 aa11.04□□□□□ -0.64
SCN1B-202ENST00000415950 UBALD2Q8IYN6 164 aa11.04□□□□□ -0.64
SCN1B-202ENST00000415950 MRPL18Q9H0U6 180 aaKnown RBP11.04□□□□□ -0.64
SCN1B-202ENST00000415950 RNF7Q9UBF6 113 aa11.04□□□□□ -0.64
SCN1B-202ENST00000415950 HSPB8Q9UJY1 196 aa11.04□□□□□ -0.64
SCN1B-202ENST00000415950 OR51B2Q9Y5P1 312 aa11.04□□□□□ -0.64
SCN1B-202ENST00000415950 IGHV5-10-1A0A0J9YXX1 117 aa11.04□□□□□ -0.64
SCN1B-202ENST00000415950 SH2D7A6NKC9 451 aaPredicted RBP11.04□□□□□ -0.64
SCN1B-202ENST00000415950 LINC00869P0C866 280 aa11.04□□□□□ -0.64
SCN1B-202ENST00000415950 PRDX2P32119 198 aa11.04□□□□□ -0.64
SCN1B-202ENST00000415950 SNRNP40Q96DI7 357 aaKnown RBP11.04□□□□□ -0.64
SCN1B-202ENST00000415950 PERPQ96FX8 193 aa11.04□□□□□ -0.64
SCN1B-202ENST00000415950 SCARF2Q96GP6 870 aaPredicted RBP11.04□□□□□ -0.64
SCN1B-202ENST00000415950 CYTL1Q9NRR1 136 aa11.04□□□□□ -0.64
SCN1B-202ENST00000415950 ZNF581Q9P0T4 197 aa11.04□□□□□ -0.64
SCN1B-202ENST00000415950 LOC107984156A0A0G2JMH3 177 aa11.04□□□□□ -0.64
SCN1B-202ENST00000415950 SRIP30626 198 aa11.04□□□□□ -0.64
SCN1B-202ENST00000415950 GLIPR1P48060 266 aa11.04□□□□□ -0.64
SCN1B-202ENST00000415950 DLX1P56177 255 aa11.04□□□□□ -0.64
SCN1B-202ENST00000415950 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.04□□□□□ -0.64
SCN1B-202ENST00000415950 ABLIM2Q6H8Q1 611 aa11.04□□□□□ -0.64
SCN1B-202ENST00000415950 ARL17AQ8IVW1 177 aa11.04□□□□□ -0.64
SCN1B-202ENST00000415950 OR10S1Q8NGN2 331 aa11.04□□□□□ -0.64
SCN1B-202ENST00000415950 LEAP2Q969E1 77 aa11.04□□□□□ -0.64
SCN1B-202ENST00000415950 SSBP3Q9BWW4 388 aaPredicted RBP11.04□□□□□ -0.64
SCN1B-202ENST00000415950 PARLQ9H300 379 aa11.04□□□□□ -0.64
SCN1B-202ENST00000415950 WFDC1Q9HC57 220 aa11.04□□□□□ -0.64
SCN1B-202ENST00000415950 CA11O75493 328 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms