RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 Q6ZS46 218 aa16.32■□□□□ 0.2
PTPRU-203ENST00000415600 OR8H3Q8N146 312 aa16.32■□□□□ 0.2
PTPRU-203ENST00000415600 OR2A7Q96R45 310 aa16.32■□□□□ 0.2
PTPRU-203ENST00000415600 TSSC4Q9Y5U2 329 aaPredicted RBP16.32■□□□□ 0.2
PTPRU-203ENST00000415600 TCRBV4S1A1TA0A5B7 111 aa16.31■□□□□ 0.2
PTPRU-203ENST00000415600 NPIPB11E5RHQ5 1161 aa16.31■□□□□ 0.2
PTPRU-203ENST00000415600 HES1Q14469 280 aa16.31■□□□□ 0.2
PTPRU-203ENST00000415600 C9orf152Q5JTZ5 239 aa16.31■□□□□ 0.2
PTPRU-203ENST00000415600 HIST2H2BDQ6DRA6 164 aa16.31■□□□□ 0.2
PTPRU-203ENST00000415600 TMEM230Q96A57 120 aa16.31■□□□□ 0.2
PTPRU-203ENST00000415600 RTBDNQ9BSG5 229 aaPredicted RBP16.31■□□□□ 0.2
PTPRU-203ENST00000415600 PIPOXQ9P0Z9 390 aa16.31■□□□□ 0.2
PTPRU-203ENST00000415600 PLXNB1O43157 2135 aa16.31■□□□□ 0.2
PTPRU-203ENST00000415600 AKR1C4P17516 323 aa16.3■□□□□ 0.2
PTPRU-203ENST00000415600 CD33P20138 364 aa16.3■□□□□ 0.2
PTPRU-203ENST00000415600 RAP2BP61225 183 aa16.3■□□□□ 0.2
PTPRU-203ENST00000415600 KIR2DS1Q14954 304 aa16.3■□□□□ 0.2
PTPRU-203ENST00000415600 LTC4SQ16873 150 aa16.3■□□□□ 0.2
PTPRU-203ENST00000415600 RFESDQ8TAC1 157 aa16.3■□□□□ 0.2
PTPRU-203ENST00000415600 MITD1Q8WV92 249 aa16.3■□□□□ 0.2
PTPRU-203ENST00000415600 PSG11Q9UQ72 335 aa16.3■□□□□ 0.2
PTPRU-203ENST00000415600 DUS4LO95620 317 aaKnown RBP16.3■□□□□ 0.2
PTPRU-203ENST00000415600 PF4P02776 101 aa16.3■□□□□ 0.2
PTPRU-203ENST00000415600 PGAM2P15259 253 aa16.3■□□□□ 0.2
PTPRU-203ENST00000415600 IL3RAP26951 378 aa16.3■□□□□ 0.2
PTPRU-203ENST00000415600 GAPTQ8N292 157 aa16.3■□□□□ 0.2
PTPRU-203ENST00000415600 UXS1Q8NBZ7 420 aa16.3■□□□□ 0.2
PTPRU-203ENST00000415600 ASB13Q8WXK3 278 aa16.3■□□□□ 0.2
PTPRU-203ENST00000415600 C14orf166Q9Y224 244 aaKnown RBP16.3■□□□□ 0.2
PTPRU-203ENST00000415600 A0A1W2PRX2 142 aa16.29■□□□□ 0.2
PTPRU-203ENST00000415600 TRDCB7Z8K6 153 aa16.29■□□□□ 0.2
PTPRU-203ENST00000415600 GOSR2O14653 212 aa16.29■□□□□ 0.2
PTPRU-203ENST00000415600 SLC22A5O76082 557 aa16.29■□□□□ 0.2
PTPRU-203ENST00000415600 CTSDP07339 412 aaPredicted RBP16.29■□□□□ 0.2
PTPRU-203ENST00000415600 KHDC1LQ5JSQ8 128 aa16.29■□□□□ 0.2
PTPRU-203ENST00000415600 ZBTB8BQ8NAP8 495 aaPredicted RBP16.29■□□□□ 0.2
PTPRU-203ENST00000415600 OR52M1Q8NGK5 317 aa16.29■□□□□ 0.2
PTPRU-203ENST00000415600 PLPPR1Q8TBJ4 325 aa16.29■□□□□ 0.2
PTPRU-203ENST00000415600 ZFAND1Q8TCF1 268 aa16.29■□□□□ 0.2
PTPRU-203ENST00000415600 PHB2Q99623 299 aa16.29■□□□□ 0.2
PTPRU-203ENST00000415600 FXYD6Q9H0Q3 95 aa16.29■□□□□ 0.2
PTPRU-203ENST00000415600 SNRNP70P08621 437 aaKnown RBP16.28■□□□□ 0.2
PTPRU-203ENST00000415600 CTXN2P0C2S0 81 aa16.28■□□□□ 0.2
PTPRU-203ENST00000415600 TMEM11P17152 192 aa16.28■□□□□ 0.2
PTPRU-203ENST00000415600 HLA-GP17693 338 aa16.28■□□□□ 0.2
PTPRU-203ENST00000415600 VAMP1P23763 118 aa16.28■□□□□ 0.2
PTPRU-203ENST00000415600 FCGR2CP31995 323 aa16.28■□□□□ 0.2
PTPRU-203ENST00000415600 SSTR5P35346 364 aa16.28■□□□□ 0.2
PTPRU-203ENST00000415600 GNG10P50151 68 aa16.28■□□□□ 0.2
PTPRU-203ENST00000415600 TMEM30BQ3MIR4 351 aa16.28■□□□□ 0.2
PTPRU-203ENST00000415600 LPCAT3Q6P1A2 487 aa16.28■□□□□ 0.2
PTPRU-203ENST00000415600 ZNF497Q6ZNH5 498 aa16.28■□□□□ 0.2
PTPRU-203ENST00000415600 MOB1BQ7L9L4 216 aa16.28■□□□□ 0.2
PTPRU-203ENST00000415600 DRAM1Q8N682 238 aa16.28■□□□□ 0.2
PTPRU-203ENST00000415600 OR2T35Q8NGX2 323 aa16.28■□□□□ 0.2
PTPRU-203ENST00000415600 ADARB2-AS1A8MUL3 147 aa16.27■□□□□ 0.2
PTPRU-203ENST00000415600 G3V3Q6 166 aa16.27■□□□□ 0.2
PTPRU-203ENST00000415600 FGF16O43320 207 aa16.27■□□□□ 0.2
PTPRU-203ENST00000415600 SFT2D2O95562 160 aa16.27■□□□□ 0.2
PTPRU-203ENST00000415600 GAPDHP04406 335 aaKnown RBP16.27■□□□□ 0.2
PTPRU-203ENST00000415600 UCP3P55916 312 aa16.27■□□□□ 0.2
PTPRU-203ENST00000415600 H2BFSP57053 126 aa16.27■□□□□ 0.2
PTPRU-203ENST00000415600 LEAP2Q969E1 77 aa16.27■□□□□ 0.2
PTPRU-203ENST00000415600 ARL11Q969Q4 196 aa16.27■□□□□ 0.2
PTPRU-203ENST00000415600 MOB3AQ96BX8 217 aa16.27■□□□□ 0.2
PTPRU-203ENST00000415600 SLC23A1Q9UHI7 598 aa16.27■□□□□ 0.2
PTPRU-203ENST00000415600 MGAT4AQ9UM21 535 aa16.27■□□□□ 0.2
PTPRU-203ENST00000415600 A0A0B4J2A0 478 aa16.26■□□□□ 0.19
PTPRU-203ENST00000415600 FAM90A9PA6NNJ1 464 aa16.26■□□□□ 0.19
PTPRU-203ENST00000415600 SPINT2O43291 252 aa16.26■□□□□ 0.19
PTPRU-203ENST00000415600 IGHV3-7P01780 117 aa16.26■□□□□ 0.19
PTPRU-203ENST00000415600 SCTP09683 121 aa16.26■□□□□ 0.19
PTPRU-203ENST00000415600 PI3P19957 117 aa16.26■□□□□ 0.19
PTPRU-203ENST00000415600 HLA-DRB3P79483 266 aa16.26■□□□□ 0.19
PTPRU-203ENST00000415600 Q3ZCU0 254 aa16.26■□□□□ 0.19
PTPRU-203ENST00000415600 IGSF11Q5DX21 431 aa16.26■□□□□ 0.19
PTPRU-203ENST00000415600 OR5M8Q8NGP6 311 aa16.26■□□□□ 0.19
PTPRU-203ENST00000415600 SHPKQ9UHJ6 478 aa16.26■□□□□ 0.19
PTPRU-203ENST00000415600 PSMB11A5LHX3 300 aa16.26■□□□□ 0.19
PTPRU-203ENST00000415600 HSD17B6O14756 317 aa16.26■□□□□ 0.19
PTPRU-203ENST00000415600 SUPT4H1P63272 117 aaKnown RBP16.26■□□□□ 0.19
PTPRU-203ENST00000415600 OXLD1Q5BKU9 147 aa16.26■□□□□ 0.19
PTPRU-203ENST00000415600 LY6G6FQ5SQ64 297 aa16.26■□□□□ 0.19
PTPRU-203ENST00000415600 C6orf183Q5T699 404 aa16.26■□□□□ 0.19
PTPRU-203ENST00000415600 TRAT1Q6PIZ9 186 aa16.26■□□□□ 0.19
PTPRU-203ENST00000415600 C8orf31Q8N9H6 132 aa16.26■□□□□ 0.19
PTPRU-203ENST00000415600 OR4A4PQ8NGN8 299 aa16.26■□□□□ 0.19
PTPRU-203ENST00000415600 CASTOR1Q8WTX7 329 aa16.26■□□□□ 0.19
PTPRU-203ENST00000415600 PRKDCP78527 4128 aaKnown RBP16.25■□□□□ 0.19
PTPRU-203ENST00000415600 A0A1W2PPI3 338 aa16.25■□□□□ 0.19
PTPRU-203ENST00000415600 DBX1A6NMT0 343 aa16.25■□□□□ 0.19
PTPRU-203ENST00000415600 RGS11O94810 467 aa16.25■□□□□ 0.19
PTPRU-203ENST00000415600 SIX6O95475 246 aa16.25■□□□□ 0.19
PTPRU-203ENST00000415600 PPYP01298 95 aa16.25■□□□□ 0.19
PTPRU-203ENST00000415600 AMY1AP04745 511 aa16.25■□□□□ 0.19
PTPRU-203ENST00000415600 HERV-K104P61576 105 aa16.25■□□□□ 0.19
PTPRU-203ENST00000415600 SLC35B1P78383 322 aa16.25■□□□□ 0.19
PTPRU-203ENST00000415600 ZNF816Q0VGE8 651 aaPredicted RBP16.25■□□□□ 0.19
PTPRU-203ENST00000415600 FBLN7Q53RD9 439 aa16.25■□□□□ 0.19
PTPRU-203ENST00000415600 WFDC9Q8NEX5 89 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms