RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 IGHV3-48P01763 117 aa12.18□□□□□ -0.46
PCDHA11-201ENST00000398640 MAP1BP46821 2468 aaKnown RBP12.18□□□□□ -0.46
PCDHA11-201ENST00000398640 C7orf69Q9H7B7 122 aa12.18□□□□□ -0.46
PCDHA11-201ENST00000398640 IGHV3-66A0A0C4DH42 116 aa12.18□□□□□ -0.46
PCDHA11-201ENST00000398640 ZNF418Q8TF45 676 aaPredicted RBP12.18□□□□□ -0.46
PCDHA11-201ENST00000398640 CLEC7AQ9BXN2 247 aa12.18□□□□□ -0.46
PCDHA11-201ENST00000398640 GP6Q9HCN6 339 aa12.18□□□□□ -0.46
PCDHA11-201ENST00000398640 MRPS18AQ9NVS2 196 aaKnown RBP12.18□□□□□ -0.46
PCDHA11-201ENST00000398640 TMEM218A2RU14 115 aa12.17□□□□□ -0.46
PCDHA11-201ENST00000398640 RND2P52198 227 aa12.17□□□□□ -0.46
PCDHA11-201ENST00000398640 HERPUD1Q15011 391 aa12.17□□□□□ -0.46
PCDHA11-201ENST00000398640 IL19Q9UHD0 177 aa12.17□□□□□ -0.46
PCDHA11-201ENST00000398640 OR2A4O95047 310 aa12.17□□□□□ -0.46
PCDHA11-201ENST00000398640 C9orf62Q8N4C0 152 aa12.17□□□□□ -0.46
PCDHA11-201ENST00000398640 OR2A7Q96R45 310 aa12.17□□□□□ -0.46
PCDHA11-201ENST00000398640 ELF5Q9UKW6 265 aaPredicted RBP12.17□□□□□ -0.46
PCDHA11-201ENST00000398640 IGHV3OR16-13A0A075B7E8 117 aa12.17□□□□□ -0.46
PCDHA11-201ENST00000398640 IGHV3-74A0A0B4J1X5 117 aa12.17□□□□□ -0.46
PCDHA11-201ENST00000398640 E9PLN8 166 aa12.17□□□□□ -0.46
PCDHA11-201ENST00000398640 EMP1P54849 157 aa12.17□□□□□ -0.46
PCDHA11-201ENST00000398640 FUT5Q11128 374 aa12.17□□□□□ -0.46
PCDHA11-201ENST00000398640 ZNF79Q15937 498 aa12.17□□□□□ -0.46
PCDHA11-201ENST00000398640 VKORC1Q9BQB6 163 aa12.17□□□□□ -0.46
PCDHA11-201ENST00000398640 ABCA7Q8IZY2 2146 aa12.17□□□□□ -0.46
PCDHA11-201ENST00000398640 IGLV3-12A0A075B6K2 115 aa12.17□□□□□ -0.46
PCDHA11-201ENST00000398640 PRSS8Q16651 343 aa12.17□□□□□ -0.46
PCDHA11-201ENST00000398640 SLC25A47Q6Q0C1 308 aa12.17□□□□□ -0.46
PCDHA11-201ENST00000398640 VN1R17PQ8TDU5 208 aa12.17□□□□□ -0.46
PCDHA11-201ENST00000398640 HSPB7Q9UBY9 170 aa12.17□□□□□ -0.46
PCDHA11-201ENST00000398640 C7orf77A4D0Y5 90 aa12.17□□□□□ -0.46
PCDHA11-201ENST00000398640 MFAP2P55001 183 aa12.17□□□□□ -0.46
PCDHA11-201ENST00000398640 LOC102723996A0A087X1L8 192 aa12.16□□□□□ -0.46
PCDHA11-201ENST00000398640 PGPA6NDG6 321 aa12.16□□□□□ -0.46
PCDHA11-201ENST00000398640 RELBQ01201 579 aa12.16□□□□□ -0.46
PCDHA11-201ENST00000398640 Q6ZT83 130 aa12.16□□□□□ -0.46
PCDHA11-201ENST00000398640 PEAR1Q5VY43 1037 aaPredicted RBP12.16□□□□□ -0.46
PCDHA11-201ENST00000398640 WDFY1Q8IWB7 410 aa12.16□□□□□ -0.46
PCDHA11-201ENST00000398640 ITLN2Q8WWU7 325 aaPredicted RBP12.16□□□□□ -0.46
PCDHA11-201ENST00000398640 OR5AC2Q9NZP5 309 aa12.16□□□□□ -0.46
PCDHA11-201ENST00000398640 ODAMA1E959 279 aa12.16□□□□□ -0.46
PCDHA11-201ENST00000398640 TRGV3P03979 118 aa12.16□□□□□ -0.46
PCDHA11-201ENST00000398640 TIMM23BQ5SRD1 257 aa12.16□□□□□ -0.46
PCDHA11-201ENST00000398640 CTHRC1Q96CG8 243 aa12.16□□□□□ -0.46
PCDHA11-201ENST00000398640 SGK494Q96LW2 274 aa12.16□□□□□ -0.46
PCDHA11-201ENST00000398640 A0A0B4J293 547 aa12.16□□□□□ -0.46
PCDHA11-201ENST00000398640 IFITM10A6NMD0 228 aa12.16□□□□□ -0.46
PCDHA11-201ENST00000398640 PLA2G10O15496 165 aa12.16□□□□□ -0.46
PCDHA11-201ENST00000398640 MIC13Q5XKP0 118 aa12.16□□□□□ -0.46
PCDHA11-201ENST00000398640 S4R3C0 116 aa12.16□□□□□ -0.46
PCDHA11-201ENST00000398640 A0A0G2JMM0 328 aa12.15□□□□□ -0.46
PCDHA11-201ENST00000398640 A0A1W2PPB8 328 aa12.15□□□□□ -0.46
PCDHA11-201ENST00000398640 A0A1W2PRS3 328 aa12.15□□□□□ -0.46
PCDHA11-201ENST00000398640 KIR3DP1A8MWS1 328 aa12.15□□□□□ -0.46
PCDHA11-201ENST00000398640 NDUFB4O95168 129 aa12.15□□□□□ -0.46
PCDHA11-201ENST00000398640 MFAP4P55083 255 aa12.15□□□□□ -0.46
PCDHA11-201ENST00000398640 PRB3Q04118 309 aaPredicted RBP12.15□□□□□ -0.46
PCDHA11-201ENST00000398640 PLA2G2CQ5R387 149 aa12.15□□□□□ -0.46
PCDHA11-201ENST00000398640 RIPPLY2Q5TAB7 128 aa12.15□□□□□ -0.46
PCDHA11-201ENST00000398640 ELOVL1Q9BW60 279 aa12.15□□□□□ -0.46
PCDHA11-201ENST00000398640 TAS2R60P59551 318 aa12.15□□□□□ -0.46
PCDHA11-201ENST00000398640 FXYD3Q14802 87 aa12.15□□□□□ -0.46
PCDHA11-201ENST00000398640 FAM74A3Q4VXF1 159 aa12.15□□□□□ -0.46
PCDHA11-201ENST00000398640 FAM74A4Q5TZK3 123 aa12.15□□□□□ -0.46
PCDHA11-201ENST00000398640 MMD2Q8IY49 270 aa12.15□□□□□ -0.46
PCDHA11-201ENST00000398640 EEF1AKMT3Q96AZ1 226 aa12.15□□□□□ -0.46
PCDHA11-201ENST00000398640 DLL3Q9NYJ7 618 aa12.15□□□□□ -0.46
PCDHA11-201ENST00000398640 PAM16Q9Y3D7 125 aa12.15□□□□□ -0.46
PCDHA11-201ENST00000398640 H0Y980 276 aa12.15□□□□□ -0.46
PCDHA11-201ENST00000398640 CD1AP06126 327 aa12.15□□□□□ -0.46
PCDHA11-201ENST00000398640 MEOX2P50222 304 aa12.15□□□□□ -0.46
PCDHA11-201ENST00000398640 C11orf44Q8N8P7 122 aa12.15□□□□□ -0.46
PCDHA11-201ENST00000398640 PGLYRP4Q96LB8 373 aa12.15□□□□□ -0.46
PCDHA11-201ENST00000398640 IGHV3-49A0A0A0MS15 119 aa12.15□□□□□ -0.46
PCDHA11-201ENST00000398640 ERVH48-1M5A8F1 160 aa12.15□□□□□ -0.46
PCDHA11-201ENST00000398640 GLIPR1P48060 266 aa12.15□□□□□ -0.46
PCDHA11-201ENST00000398640 UNC119Q13432 240 aa12.15□□□□□ -0.46
PCDHA11-201ENST00000398640 NSUN5P1Q3KNT7 163 aa12.15□□□□□ -0.46
PCDHA11-201ENST00000398640 RHOVQ96L33 236 aa12.15□□□□□ -0.46
PCDHA11-201ENST00000398640 PHLDA3Q9Y5J5 127 aa12.15□□□□□ -0.46
PCDHA11-201ENST00000398640 B4DEV8 164 aa12.15□□□□□ -0.47
PCDHA11-201ENST00000398640 M0R143 59 aa12.15□□□□□ -0.47
PCDHA11-201ENST00000398640 PGLYRP1O75594 196 aaPredicted RBP12.15□□□□□ -0.47
PCDHA11-201ENST00000398640 ADIPOQQ15848 244 aa12.15□□□□□ -0.47
PCDHA11-201ENST00000398640 LHFPL6Q9Y693 200 aa12.15□□□□□ -0.47
PCDHA11-201ENST00000398640 FRMPD3Q5JV73 1810 aa12.15□□□□□ -0.47
PCDHA11-201ENST00000398640 TCF15Q12870 199 aa12.14□□□□□ -0.47
PCDHA11-201ENST00000398640 BPIFA4PQ86YQ2 179 aa12.14□□□□□ -0.47
PCDHA11-201ENST00000398640 OR4X2Q8NGF9 303 aa12.14□□□□□ -0.47
PCDHA11-201ENST00000398640 CD74P04233 296 aa12.14□□□□□ -0.47
PCDHA11-201ENST00000398640 ISG15P05161 165 aa12.14□□□□□ -0.47
PCDHA11-201ENST00000398640 FAM201AQ5SY85 155 aa12.14□□□□□ -0.47
PCDHA11-201ENST00000398640 STPG3Q8N7X2 389 aa12.14□□□□□ -0.47
PCDHA11-201ENST00000398640 CX3CL1P78423 397 aa12.14□□□□□ -0.47
PCDHA11-201ENST00000398640 ZNF708P17019 499 aa12.14□□□□□ -0.47
PCDHA11-201ENST00000398640 CKS2P33552 79 aa12.14□□□□□ -0.47
PCDHA11-201ENST00000398640 COX19Q49B96 90 aa12.14□□□□□ -0.47
PCDHA11-201ENST00000398640 RAB37Q96AX2 223 aa12.14□□□□□ -0.47
PCDHA11-201ENST00000398640 TRAF4Q9BUZ4 470 aaPredicted RBP12.14□□□□□ -0.47
PCDHA11-201ENST00000398640 CBY1Q9Y3M2 126 aa12.14□□□□□ -0.47
PCDHA11-201ENST00000398640 DSPPQ9NZW4 1301 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms