RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 C17orf100A8MU93 164 aa6.89□□□□□ -1.31
LIMS1-203ENST00000393310 DIRC3C9JPN6 131 aa6.89□□□□□ -1.31
LIMS1-203ENST00000393310 CT45A6P0DMU7 189 aa6.89□□□□□ -1.31
LIMS1-203ENST00000393310 CT45A5P0DMU8 189 aa6.89□□□□□ -1.31
LIMS1-203ENST00000393310 CT45A7P0DMV0 189 aa6.89□□□□□ -1.31
LIMS1-203ENST00000393310 TMEM155Q4W5P6 130 aa6.89□□□□□ -1.31
LIMS1-203ENST00000393310 CT45A1Q5HYN5 189 aa6.89□□□□□ -1.31
LIMS1-203ENST00000393310 C6orf136Q5SQH8 315 aa6.89□□□□□ -1.31
LIMS1-203ENST00000393310 SPATA46Q5T0L3 261 aa6.89□□□□□ -1.31
LIMS1-203ENST00000393310 FAM162BQ5T6X4 162 aa6.89□□□□□ -1.31
LIMS1-203ENST00000393310 CT45A3Q8NHU0 189 aa6.89□□□□□ -1.31
LIMS1-203ENST00000393310 SLAMF6Q96DU3 332 aa6.89□□□□□ -1.31
LIMS1-203ENST00000393310 CKLFQ9UBR5 152 aa6.89□□□□□ -1.31
LIMS1-203ENST00000393310 YTHDF2Q9Y5A9 579 aaKnown RBP6.89□□□□□ -1.31
LIMS1-203ENST00000393310 BOD1L1Q8NFC6 3051 aa6.89□□□□□ -1.31
LIMS1-203ENST00000393310 SMIM9A6NGZ8 99 aa6.89□□□□□ -1.31
LIMS1-203ENST00000393310 RELBQ01201 579 aa6.89□□□□□ -1.31
LIMS1-203ENST00000393310 AMMECR1LQ6DCA0 310 aa6.89□□□□□ -1.31
LIMS1-203ENST00000393310 PLXDC2Q6UX71 529 aa6.89□□□□□ -1.31
LIMS1-203ENST00000393310 C1QL2Q7Z5L3 287 aa6.89□□□□□ -1.31
LIMS1-203ENST00000393310 LRRC75AQ8NAA5 344 aa6.89□□□□□ -1.31
LIMS1-203ENST00000393310 DDB2Q92466 427 aa6.89□□□□□ -1.31
LIMS1-203ENST00000393310 ZNF300Q96RE9 604 aaPredicted RBP6.89□□□□□ -1.31
LIMS1-203ENST00000393310 TLNRD1Q9H1K6 362 aa6.89□□□□□ -1.31
LIMS1-203ENST00000393310 CNOT2Q9NZN8 540 aaKnown RBP6.89□□□□□ -1.31
LIMS1-203ENST00000393310 NPIPB13A6NJU9 1138 aa6.88□□□□□ -1.31
LIMS1-203ENST00000393310 NPIPB4C9JG80 1138 aa6.88□□□□□ -1.31
LIMS1-203ENST00000393310 OPN1SWP03999 348 aa6.88□□□□□ -1.31
LIMS1-203ENST00000393310 SELENOPP49908 381 aa6.88□□□□□ -1.31
LIMS1-203ENST00000393310 FAM174BQ3ZCQ3 159 aa6.88□□□□□ -1.31
LIMS1-203ENST00000393310 SLC25A44Q96H78 314 aaPredicted RBP6.88□□□□□ -1.31
LIMS1-203ENST00000393310 PLEKHF2Q9H8W4 249 aa6.88□□□□□ -1.31
LIMS1-203ENST00000393310 TIMM8BQ9Y5J9 83 aaPredicted RBP6.88□□□□□ -1.31
LIMS1-203ENST00000393310 INSIG2Q9Y5U4 225 aa6.88□□□□□ -1.31
LIMS1-203ENST00000393310 ANAPC1Q9H1A4 1944 aa6.88□□□□□ -1.31
LIMS1-203ENST00000393310 A0A0C4DFX4 3053 aa6.88□□□□□ -1.31
LIMS1-203ENST00000393310 hADV38S2A0JD32 116 aa6.88□□□□□ -1.31
LIMS1-203ENST00000393310 HSPB6O14558 160 aa6.88□□□□□ -1.31
LIMS1-203ENST00000393310 CFDP00746 253 aaPredicted RBP6.88□□□□□ -1.31
LIMS1-203ENST00000393310 PGA3P0DJD8 388 aa6.88□□□□□ -1.31
LIMS1-203ENST00000393310 POLR2JP52435 117 aaKnown RBP6.88□□□□□ -1.31
LIMS1-203ENST00000393310 ZP1P60852 638 aa6.88□□□□□ -1.31
LIMS1-203ENST00000393310 PMCHL1Q16048 86 aa6.88□□□□□ -1.31
LIMS1-203ENST00000393310 NSUN5P1Q3KNT7 163 aa6.88□□□□□ -1.31
LIMS1-203ENST00000393310 UNQ5815/PRO19632Q6UWF5 114 aa6.88□□□□□ -1.31
LIMS1-203ENST00000393310 OR2L13Q8N349 312 aa6.88□□□□□ -1.31
LIMS1-203ENST00000393310 KRTCAP2Q8N6L1 136 aa6.88□□□□□ -1.31
LIMS1-203ENST00000393310 NSUN5Q96P11 429 aaKnown RBP6.88□□□□□ -1.31
LIMS1-203ENST00000393310 SLC35B3Q9H1N7 401 aa6.88□□□□□ -1.31
LIMS1-203ENST00000393310 SPCS1Q9Y6A9 102 aa6.88□□□□□ -1.31
LIMS1-203ENST00000393310 TRGC2P03986 189 aa6.88□□□□□ -1.31
LIMS1-203ENST00000393310 CNN1P51911 297 aaKnown RBP6.88□□□□□ -1.31
LIMS1-203ENST00000393310 LRRC75BQ2VPJ9 315 aa6.88□□□□□ -1.31
LIMS1-203ENST00000393310 WDR82Q6UXN9 313 aa6.88□□□□□ -1.31
LIMS1-203ENST00000393310 TMEM99Q8N816 258 aa6.88□□□□□ -1.31
LIMS1-203ENST00000393310 PPIAL4CA0A0B4J2A2 164 aa6.87□□□□□ -1.31
LIMS1-203ENST00000393310 A0A0U1RRA0 63 aa6.87□□□□□ -1.31
LIMS1-203ENST00000393310 CCL25O15444 150 aa6.87□□□□□ -1.31
LIMS1-203ENST00000393310 PPIAL4GP0DN37 164 aa6.87□□□□□ -1.31
LIMS1-203ENST00000393310 WNT3P56703 355 aa6.87□□□□□ -1.31
LIMS1-203ENST00000393310 FOXF2Q12947 444 aa6.87□□□□□ -1.31
LIMS1-203ENST00000393310 DUSP5Q16690 384 aa6.87□□□□□ -1.31
LIMS1-203ENST00000393310 ZNF474Q6S9Z5 364 aaPredicted RBP6.87□□□□□ -1.31
LIMS1-203ENST00000393310 LYPD4Q6UWN0 246 aa6.87□□□□□ -1.31
LIMS1-203ENST00000393310 SIGLEC15Q6ZMC9 328 aa6.87□□□□□ -1.31
LIMS1-203ENST00000393310 ADGRE4PQ86SQ3 457 aa6.87□□□□□ -1.31
LIMS1-203ENST00000393310 OR2K2Q8NGT1 345 aa6.87□□□□□ -1.31
LIMS1-203ENST00000393310 LGALS14Q8TCE9 139 aa6.87□□□□□ -1.31
LIMS1-203ENST00000393310 RAB40CQ96S21 281 aa6.87□□□□□ -1.31
LIMS1-203ENST00000393310 GPR35Q9HC97 309 aa6.87□□□□□ -1.31
LIMS1-203ENST00000393310 PRSS50Q9UI38 385 aa6.87□□□□□ -1.31
LIMS1-203ENST00000393310 A0A1W2PRF3 423 aa6.87□□□□□ -1.31
LIMS1-203ENST00000393310 A0A1W2PRM7 423 aa6.87□□□□□ -1.31
LIMS1-203ENST00000393310 IGHV4-39P01824 125 aa6.87□□□□□ -1.31
LIMS1-203ENST00000393310 VDAC1P21796 283 aa6.87□□□□□ -1.31
LIMS1-203ENST00000393310 P2RY1P47900 373 aa6.87□□□□□ -1.31
LIMS1-203ENST00000393310 MTNR1BP49286 362 aa6.87□□□□□ -1.31
LIMS1-203ENST00000393310 MMP16P51512 607 aa6.87□□□□□ -1.31
LIMS1-203ENST00000393310 Q6ZRG5 221 aa6.87□□□□□ -1.31
LIMS1-203ENST00000393310 BPIFA4PQ86YQ2 179 aa6.87□□□□□ -1.31
LIMS1-203ENST00000393310 OR8B12Q8NGG6 310 aa6.87□□□□□ -1.31
LIMS1-203ENST00000393310 PRDM13Q9H4Q3 707 aa6.87□□□□□ -1.31
LIMS1-203ENST00000393310 MBNL3Q9NUK0 354 aaKnown RBP6.87□□□□□ -1.31
LIMS1-203ENST00000393310 NDUFB2O95178 105 aa6.87□□□□□ -1.31
LIMS1-203ENST00000393310 TACSTD2P09758 323 aa6.87□□□□□ -1.31
LIMS1-203ENST00000393310 PGAM2P15259 253 aa6.87□□□□□ -1.31
LIMS1-203ENST00000393310 GNB3P16520 340 aa6.87□□□□□ -1.31
LIMS1-203ENST00000393310 RPS25P62851 125 aaKnown RBP6.87□□□□□ -1.31
LIMS1-203ENST00000393310 MMDQ15546 238 aa6.87□□□□□ -1.31
LIMS1-203ENST00000393310 MDP1Q86V88 176 aa6.87□□□□□ -1.31
LIMS1-203ENST00000393310 OR1B1Q8NGR6 318 aa6.87□□□□□ -1.31
LIMS1-203ENST00000393310 SLC25A40Q8TBP6 338 aa6.87□□□□□ -1.31
LIMS1-203ENST00000393310 RPEQ96AT9 228 aa6.87□□□□□ -1.31
LIMS1-203ENST00000393310 TMEM106BQ9NUM4 274 aa6.87□□□□□ -1.31
LIMS1-203ENST00000393310 ZNF443Q9Y2A4 671 aaPredicted RBP6.87□□□□□ -1.31
LIMS1-203ENST00000393310 SNRPGP15A8MWD9 76 aa6.87□□□□□ -1.31
LIMS1-203ENST00000393310 M0R082 166 aa6.87□□□□□ -1.31
LIMS1-203ENST00000393310 BMPR1BO00238 502 aa6.87□□□□□ -1.31
LIMS1-203ENST00000393310 TYROBPO43914 113 aa6.87□□□□□ -1.31
LIMS1-203ENST00000393310 TNFSF13O75888 250 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms