RNA–Protein interactions for RNA: ENST00000391057.1

RNU6-550P-201, Transcript of RNA, U6 small nuclear 550, pseudogene, humanhuman

BASIC

Gene RNU6-550P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-550P-201ENST00000391057 OR10D3Q8NH80 312 aa0.69□□□□□ -2.3
RNU6-550P-201ENST00000391057 C12orf43Q96C57 262 aaKnown RBP0.69□□□□□ -2.3
RNU6-550P-201ENST00000391057 PPCDCQ96CD2 204 aa0.69□□□□□ -2.3
RNU6-550P-201ENST00000391057 MROQ9BYG7 248 aa0.69□□□□□ -2.3
RNU6-550P-201ENST00000391057 HDGFL3Q9Y3E1 203 aa0.69□□□□□ -2.3
RNU6-550P-201ENST00000391057 TIMM9Q9Y5J7 89 aa0.69□□□□□ -2.3
RNU6-550P-201ENST00000391057 HELZ2Q9BYK8 2649 aaKnown RBP0.68□□□□□ -2.3
RNU6-550P-201ENST00000391057 SDK1Q7Z5N4 2213 aa0.68□□□□□ -2.3
RNU6-550P-201ENST00000391057 OR6C6A6NF89 314 aa0.68□□□□□ -2.3
RNU6-550P-201ENST00000391057 HMSDA8MTL9 139 aa0.68□□□□□ -2.3
RNU6-550P-201ENST00000391057 MKRN2OSH3BPM6 223 aa0.68□□□□□ -2.3
RNU6-550P-201ENST00000391057 CCRL2O00421 344 aa0.68□□□□□ -2.3
RNU6-550P-201ENST00000391057 STX10O60499 249 aa0.68□□□□□ -2.3
RNU6-550P-201ENST00000391057 ATP6V1G2O95670 118 aa0.68□□□□□ -2.3
RNU6-550P-201ENST00000391057 SERPINA7P05543 415 aa0.68□□□□□ -2.3
RNU6-550P-201ENST00000391057 ALDH3A1P30838 453 aa0.68□□□□□ -2.3
RNU6-550P-201ENST00000391057 EMP1P54849 157 aa0.68□□□□□ -2.3
RNU6-550P-201ENST00000391057 TAS2R20P59543 309 aa0.68□□□□□ -2.3
RNU6-550P-201ENST00000391057 TBPL1P62380 186 aa0.68□□□□□ -2.3
RNU6-550P-201ENST00000391057 ANGPT1Q15389 498 aa0.68□□□□□ -2.3
RNU6-550P-201ENST00000391057 MIAQ16674 131 aa0.68□□□□□ -2.3
RNU6-550P-201ENST00000391057 C4orf26Q17RF5 130 aa0.68□□□□□ -2.3
RNU6-550P-201ENST00000391057 SLC36A1Q7Z2H8 476 aa0.68□□□□□ -2.3
RNU6-550P-201ENST00000391057 RPS19BP1Q86WX3 136 aaKnown RBP0.68□□□□□ -2.3
RNU6-550P-201ENST00000391057 LFNGQ8NES3 379 aa0.68□□□□□ -2.3
RNU6-550P-201ENST00000391057 OR5L1Q8NGL2 311 aa0.68□□□□□ -2.3
RNU6-550P-201ENST00000391057 ZNF675Q8TD23 568 aa0.68□□□□□ -2.3
RNU6-550P-201ENST00000391057 RNASE6Q93091 150 aaKnown RBP0.68□□□□□ -2.3
RNU6-550P-201ENST00000391057 TMA16Q96EY4 203 aaKnown RBP0.68□□□□□ -2.3
RNU6-550P-201ENST00000391057 NMNAT3Q96T66 252 aa0.68□□□□□ -2.3
RNU6-550P-201ENST00000391057 OR52A5Q9H2C5 316 aa0.68□□□□□ -2.3
RNU6-550P-201ENST00000391057 TREM1Q9NP99 234 aa0.68□□□□□ -2.3
RNU6-550P-201ENST00000391057 CCDC88CQ9P219 2028 aa0.68□□□□□ -2.3
RNU6-550P-201ENST00000391057 LRPPRCP42704 1394 aaKnown RBP0.68□□□□□ -2.3
RNU6-550P-201ENST00000391057 IGHV1-18A0A0C4DH31 117 aa0.67□□□□□ -2.3
RNU6-550P-201ENST00000391057 A0A0J9YW62 118 aa0.67□□□□□ -2.3
RNU6-550P-201ENST00000391057 C9JCJ5 164 aa0.67□□□□□ -2.3
RNU6-550P-201ENST00000391057 CREBL2O60519 120 aaPredicted RBP0.67□□□□□ -2.3
RNU6-550P-201ENST00000391057 MRPS14O60783 128 aaKnown RBP0.67□□□□□ -2.3
RNU6-550P-201ENST00000391057 RD3LP0DJH9 198 aa0.67□□□□□ -2.3
RNU6-550P-201ENST00000391057 PSMB8P28062 276 aa0.67□□□□□ -2.3
RNU6-550P-201ENST00000391057 MIPP30301 263 aa0.67□□□□□ -2.3
RNU6-550P-201ENST00000391057 CCR7P32248 378 aa0.67□□□□□ -2.3
RNU6-550P-201ENST00000391057 CA5AP35218 305 aa0.67□□□□□ -2.3
RNU6-550P-201ENST00000391057 AP1S1P61966 158 aa0.67□□□□□ -2.3
RNU6-550P-201ENST00000391057 FABP5Q01469 135 aa0.67□□□□□ -2.3
RNU6-550P-201ENST00000391057 HLA-DRB5Q30154 266 aa0.67□□□□□ -2.3
RNU6-550P-201ENST00000391057 FP248Q71RG6 208 aaPredicted RBP0.67□□□□□ -2.3
RNU6-550P-201ENST00000391057 BOD1L2Q8IYS8 172 aa0.67□□□□□ -2.3
RNU6-550P-201ENST00000391057 TTTY13Q9BZ97 58 aa0.67□□□□□ -2.3
RNU6-550P-201ENST00000391057 MED9Q9NWA0 146 aa0.67□□□□□ -2.3
RNU6-550P-201ENST00000391057 PCYT1BQ9Y5K3 369 aaPredicted RBP0.67□□□□□ -2.3
RNU6-550P-201ENST00000391057 TEX50A0A1B0GTY4 177 aa0.66□□□□□ -2.3
RNU6-550P-201ENST00000391057 C5orf49A4QMS7 147 aa0.66□□□□□ -2.3
RNU6-550P-201ENST00000391057 AZIN1O14977 448 aa0.66□□□□□ -2.3
RNU6-550P-201ENST00000391057 TOX3O15405 576 aaPredicted RBP0.66□□□□□ -2.3
RNU6-550P-201ENST00000391057 NEMFO60524 1076 aa0.66□□□□□ -2.3
RNU6-550P-201ENST00000391057 CIAO1O76071 339 aa0.66□□□□□ -2.3
RNU6-550P-201ENST00000391057 HLA-DQB2P05538 268 aa0.66□□□□□ -2.3
RNU6-550P-201ENST00000391057 RPSAP08865 295 aaKnown RBP0.66□□□□□ -2.3
RNU6-550P-201ENST00000391057 CXCL2P19875 107 aa0.66□□□□□ -2.3
RNU6-550P-201ENST00000391057 CXCL3P19876 107 aa0.66□□□□□ -2.3
RNU6-550P-201ENST00000391057 HADHBP55084 474 aaKnown RBP0.66□□□□□ -2.3
RNU6-550P-201ENST00000391057 AQP4P55087 323 aa0.66□□□□□ -2.3
RNU6-550P-201ENST00000391057 TPI1P60174 286 aa0.66□□□□□ -2.3
RNU6-550P-201ENST00000391057 PMS2P3Q13401 168 aa0.66□□□□□ -2.3
RNU6-550P-201ENST00000391057 EBPQ15125 230 aaKnown RBP0.66□□□□□ -2.3
RNU6-550P-201ENST00000391057 LRRC26Q2I0M4 334 aa0.66□□□□□ -2.3
RNU6-550P-201ENST00000391057 KRTAP5-10Q6L8G5 202 aa0.66□□□□□ -2.3
RNU6-550P-201ENST00000391057 C7orf65Q6ZTY9 151 aa0.66□□□□□ -2.3
RNU6-550P-201ENST00000391057 SYCE1Q8N0S2 351 aa0.66□□□□□ -2.3
RNU6-550P-201ENST00000391057 MBD3L1Q8WWY6 194 aa0.66□□□□□ -2.3
RNU6-550P-201ENST00000391057 IMMP2LQ96T52 175 aa0.66□□□□□ -2.3
RNU6-550P-201ENST00000391057 TMEM109Q9BVC6 243 aa0.66□□□□□ -2.3
RNU6-550P-201ENST00000391057 NSRP1Q9H0G5 558 aaKnown RBP0.66□□□□□ -2.3
RNU6-550P-201ENST00000391057 ZNHIT6Q9NWK9 470 aaKnown RBP0.66□□□□□ -2.3
RNU6-550P-201ENST00000391057 CFAP45Q9UL16 551 aa0.66□□□□□ -2.3
RNU6-550P-201ENST00000391057 MALRD1Q5VYJ5 2156 aa0.66□□□□□ -2.3
RNU6-550P-201ENST00000391057 KIAA2026Q5HYC2 2103 aa0.65□□□□□ -2.3
RNU6-550P-201ENST00000391057 MUC16Q8WXI7 14507 aa0.65□□□□□ -2.31
RNU6-550P-201ENST00000391057 TMED7-TICAM2A0A0A6YYA0 188 aa0.65□□□□□ -2.31
RNU6-550P-201ENST00000391057 SMLR1H3BR10 107 aa0.65□□□□□ -2.31
RNU6-550P-201ENST00000391057 H7C2G1 150 aa0.65□□□□□ -2.31
RNU6-550P-201ENST00000391057 PLA2G10O15496 165 aa0.65□□□□□ -2.31
RNU6-550P-201ENST00000391057 ORM1P02763 201 aa0.65□□□□□ -2.31
RNU6-550P-201ENST00000391057 LGALS1P09382 135 aaKnown RBP0.65□□□□□ -2.31
RNU6-550P-201ENST00000391057 FKBP1AP62942 108 aaKnown RBP0.65□□□□□ -2.31
RNU6-550P-201ENST00000391057 HLA-DRB3P79483 266 aa0.65□□□□□ -2.31
RNU6-550P-201ENST00000391057 PRB3Q04118 309 aaPredicted RBP0.65□□□□□ -2.31
RNU6-550P-201ENST00000391057 AKR1C1Q04828 323 aa0.65□□□□□ -2.31
RNU6-550P-201ENST00000391057 PLCXD2Q0VAA5 305 aa0.65□□□□□ -2.31
RNU6-550P-201ENST00000391057 CDK5R1Q15078 307 aa0.65□□□□□ -2.31
RNU6-550P-201ENST00000391057 MOGQ16653 247 aa0.65□□□□□ -2.31
RNU6-550P-201ENST00000391057 Q1T7F1 81 aa0.65□□□□□ -2.31
RNU6-550P-201ENST00000391057 RASSF6Q6ZTQ3 369 aa0.65□□□□□ -2.31
RNU6-550P-201ENST00000391057 GPHB5Q86YW7 130 aa0.65□□□□□ -2.31
RNU6-550P-201ENST00000391057 RIBC1Q8N443 379 aaPredicted RBP0.65□□□□□ -2.31
RNU6-550P-201ENST00000391057 RAB2BQ8WUD1 216 aa0.65□□□□□ -2.31
RNU6-550P-201ENST00000391057 TIPINQ9BVW5 301 aa0.65□□□□□ -2.31
RNU6-550P-201ENST00000391057 TP53TG1Q9Y2A0 90 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms