RNA–Protein interactions for RNA: ENST00000389641.8

CCDC57-202, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC57, Length 3,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-202ENST00000389641 QTRT1Q9BXR0 403 aaKnown RBP11.32□□□□□ -0.6
CCDC57-202ENST00000389641 CHCHD2Q9Y6H1 151 aaPredicted RBP11.32□□□□□ -0.6
CCDC57-202ENST00000389641 IGLV3-32A0A0A0MS00 114 aa11.32□□□□□ -0.6
CCDC57-202ENST00000389641 PDE6DO43924 150 aa11.32□□□□□ -0.6
CCDC57-202ENST00000389641 CCL3P10147 92 aa11.32□□□□□ -0.6
CCDC57-202ENST00000389641 OTX2P32243 289 aa11.32□□□□□ -0.6
CCDC57-202ENST00000389641 MRPS21P82921 87 aaKnown RBP11.32□□□□□ -0.6
CCDC57-202ENST00000389641 VAMP3Q15836 100 aa11.32□□□□□ -0.6
CCDC57-202ENST00000389641 NAT8BQ9UHF3 227 aa11.32□□□□□ -0.6
CCDC57-202ENST00000389641 ARL14EPLP0DKL9 152 aa11.31□□□□□ -0.6
CCDC57-202ENST00000389641 CD99P14209 185 aa11.31□□□□□ -0.6
CCDC57-202ENST00000389641 ASPHD1Q5U4P2 390 aa11.31□□□□□ -0.6
CCDC57-202ENST00000389641 AAED1Q7RTV5 226 aa11.31□□□□□ -0.6
CCDC57-202ENST00000389641 YRDCQ86U90 279 aaKnown RBP11.31□□□□□ -0.6
CCDC57-202ENST00000389641 DRAM1Q8N682 238 aa11.31□□□□□ -0.6
CCDC57-202ENST00000389641 FADS6Q8N9I5 356 aa11.31□□□□□ -0.6
CCDC57-202ENST00000389641 ST6GALNAC6Q969X2 333 aa11.31□□□□□ -0.6
CCDC57-202ENST00000389641 SELENOKQ9Y6D0 94 aa11.31□□□□□ -0.6
CCDC57-202ENST00000389641 COL5A1P20908 1838 aaPredicted RBP11.31□□□□□ -0.6
CCDC57-202ENST00000389641 K7EN84 100 aa11.31□□□□□ -0.6
CCDC57-202ENST00000389641 TMPRSS2O15393 492 aa11.31□□□□□ -0.6
CCDC57-202ENST00000389641 ZIC3O60481 467 aa11.31□□□□□ -0.6
CCDC57-202ENST00000389641 ZNF738Q8NE65 137 aa11.31□□□□□ -0.6
CCDC57-202ENST00000389641 ORAOV1Q8WV07 137 aa11.31□□□□□ -0.6
CCDC57-202ENST00000389641 RNF138Q8WVD3 245 aa11.31□□□□□ -0.6
CCDC57-202ENST00000389641 ZDBF2Q9HCK1 2354 aa11.3□□□□□ -0.6
CCDC57-202ENST00000389641 VAMP5O95183 116 aa11.3□□□□□ -0.6
CCDC57-202ENST00000389641 CLDN14O95500 239 aa11.3□□□□□ -0.6
CCDC57-202ENST00000389641 CCR5P51681 352 aa11.3□□□□□ -0.6
CCDC57-202ENST00000389641 FBLN7Q53RD9 439 aa11.3□□□□□ -0.6
CCDC57-202ENST00000389641 TRAPPC2LQ9UL33 140 aa11.3□□□□□ -0.6
CCDC57-202ENST00000389641 MMP17Q9ULZ9 603 aa11.3□□□□□ -0.6
CCDC57-202ENST00000389641 COX11Q9Y6N1 276 aa11.3□□□□□ -0.6
CCDC57-202ENST00000389641 YLPM1P49750 1951 aaKnown RBP11.3□□□□□ -0.6
CCDC57-202ENST00000389641 ODAMA1E959 279 aa11.3□□□□□ -0.6
CCDC57-202ENST00000389641 GFRA1P56159 465 aa11.3□□□□□ -0.6
CCDC57-202ENST00000389641 HTD2P86397 168 aa11.3□□□□□ -0.6
CCDC57-202ENST00000389641 LDLRAD2Q5SZI1 272 aa11.3□□□□□ -0.6
CCDC57-202ENST00000389641 SYT13Q7L8C5 426 aa11.3□□□□□ -0.6
CCDC57-202ENST00000389641 LOXL4Q96JB6 756 aa11.3□□□□□ -0.6
CCDC57-202ENST00000389641 C5orf49A4QMS7 147 aa11.3□□□□□ -0.6
CCDC57-202ENST00000389641 C2CD4DB7Z1M9 353 aa11.3□□□□□ -0.6
CCDC57-202ENST00000389641 DUX1O43812 170 aa11.3□□□□□ -0.6
CCDC57-202ENST00000389641 ZNF253O75346 499 aa11.3□□□□□ -0.6
CCDC57-202ENST00000389641 RHBDL1O75783 438 aa11.3□□□□□ -0.6
CCDC57-202ENST00000389641 NGFP01138 241 aa11.3□□□□□ -0.6
CCDC57-202ENST00000389641 C3orf79P0CE67 100 aa11.3□□□□□ -0.6
CCDC57-202ENST00000389641 CA6P23280 308 aa11.3□□□□□ -0.6
CCDC57-202ENST00000389641 ZNF83P51522 516 aa11.3□□□□□ -0.6
CCDC57-202ENST00000389641 TRIM61Q5EBN2 209 aa11.3□□□□□ -0.6
CCDC57-202ENST00000389641 IFI44Q8TCB0 444 aa11.3□□□□□ -0.6
CCDC57-202ENST00000389641 CHRNA10Q9GZZ6 450 aa11.3□□□□□ -0.6
CCDC57-202ENST00000389641 FSCN3Q9NQT6 498 aa11.3□□□□□ -0.6
CCDC57-202ENST00000389641 LIN7CQ9NUP9 197 aaKnown RBP11.3□□□□□ -0.6
CCDC57-202ENST00000389641 DLL3Q9NYJ7 618 aa11.3□□□□□ -0.6
CCDC57-202ENST00000389641 A0A1W2PS18 150 aa11.29□□□□□ -0.6
CCDC57-202ENST00000389641 DPRXA6NFQ7 191 aa11.29□□□□□ -0.6
CCDC57-202ENST00000389641 PMS2P5A8MQ11 134 aa11.29□□□□□ -0.6
CCDC57-202ENST00000389641 RRHO14718 337 aa11.29□□□□□ -0.6
CCDC57-202ENST00000389641 RPL30P62888 115 aaKnown RBP11.29□□□□□ -0.6
CCDC57-202ENST00000389641 FXYD3Q14802 87 aa11.29□□□□□ -0.6
CCDC57-202ENST00000389641 CXCL13O43927 109 aa11.29□□□□□ -0.6
CCDC57-202ENST00000389641 ARF1P84077 181 aaKnown RBP11.29□□□□□ -0.6
CCDC57-202ENST00000389641 MRPL21Q7Z2W9 205 aaKnown RBP11.29□□□□□ -0.6
CCDC57-202ENST00000389641 MMD2Q8IY49 270 aa11.29□□□□□ -0.6
CCDC57-202ENST00000389641 STRADBQ9C0K7 418 aa11.29□□□□□ -0.6
CCDC57-202ENST00000389641 KCNIP2Q9NS61 270 aa11.29□□□□□ -0.6
CCDC57-202ENST00000389641 IL36BQ9NZH7 164 aa11.29□□□□□ -0.6
CCDC57-202ENST00000389641 KNTC1P50748 2209 aa11.29□□□□□ -0.6
CCDC57-202ENST00000389641 LMO7DNF2Z398 122 aa11.28□□□□□ -0.6
CCDC57-202ENST00000389641 S1PR2O95136 353 aa11.28□□□□□ -0.6
CCDC57-202ENST00000389641 ESDP10768 282 aa11.28□□□□□ -0.6
CCDC57-202ENST00000389641 TSPOP30536 169 aa11.28□□□□□ -0.6
CCDC57-202ENST00000389641 RPL31P62899 125 aaKnown RBP11.28□□□□□ -0.6
CCDC57-202ENST00000389641 RELBQ01201 579 aa11.28□□□□□ -0.6
CCDC57-202ENST00000389641 DEGS1O15121 323 aa11.28□□□□□ -0.6
CCDC57-202ENST00000389641 SYNGR4O95473 234 aa11.28□□□□□ -0.6
CCDC57-202ENST00000389641 MRPL54Q6P161 138 aaKnown RBP11.28□□□□□ -0.6
CCDC57-202ENST00000389641 WDR74Q6RFH5 385 aaPredicted RBP11.28□□□□□ -0.6
CCDC57-202ENST00000389641 HSPB7Q9UBY9 170 aa11.28□□□□□ -0.6
CCDC57-202ENST00000389641 YTHDF2Q9Y5A9 579 aaKnown RBP11.28□□□□□ -0.6
CCDC57-202ENST00000389641 FAM90A10PA6NDY2 464 aa11.27□□□□□ -0.6
CCDC57-202ENST00000389641 FAM90A18PA6NE21 464 aa11.27□□□□□ -0.6
CCDC57-202ENST00000389641 FAM90A16PA6NEW6 464 aa11.27□□□□□ -0.6
CCDC57-202ENST00000389641 FAM90A20PA6NIJ5 464 aa11.27□□□□□ -0.6
CCDC57-202ENST00000389641 FAM90A8PA6NJQ4 464 aa11.27□□□□□ -0.6
CCDC57-202ENST00000389641 FAM90A7PA6NKC0 464 aa11.27□□□□□ -0.6
CCDC57-202ENST00000389641 LRRC30A6NM36 301 aa11.27□□□□□ -0.6
CCDC57-202ENST00000389641 FAM90A22PA8MWA6 464 aa11.27□□□□□ -0.6
CCDC57-202ENST00000389641 FAM90A12PA8MX19 464 aa11.27□□□□□ -0.6
CCDC57-202ENST00000389641 FAM90A5PA8MXJ8 464 aa11.27□□□□□ -0.6
CCDC57-202ENST00000389641 FAM90A23PA8MXZ1 464 aa11.27□□□□□ -0.6
CCDC57-202ENST00000389641 SCRG1O75711 98 aa11.27□□□□□ -0.6
CCDC57-202ENST00000389641 FAM90A15PP0C7V4 464 aa11.27□□□□□ -0.6
CCDC57-202ENST00000389641 FAM90A13PP0C7W8 464 aa11.27□□□□□ -0.6
CCDC57-202ENST00000389641 FAM90A14PP0C7W9 464 aa11.27□□□□□ -0.6
CCDC57-202ENST00000389641 FAM90A24PP0C7X0 464 aa11.27□□□□□ -0.6
CCDC57-202ENST00000389641 SRIP30626 198 aa11.27□□□□□ -0.6
CCDC57-202ENST00000389641 SRSF7Q16629 238 aaKnown RBP eCLIP11.27□□□□□ -0.6
CCDC57-202ENST00000389641 Q8NFD4 153 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms