RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 FAM216AQ8WUB2 273 aa11.19□□□□□ -0.62
NPHP4-203ENST00000378169 RARRES2Q99969 163 aa11.19□□□□□ -0.62
NPHP4-203ENST00000378169 TMEM140Q9NV12 185 aa11.19□□□□□ -0.62
NPHP4-203ENST00000378169 H0YIZ8 118 aa11.19□□□□□ -0.62
NPHP4-203ENST00000378169 BCL2P10415 239 aa11.19□□□□□ -0.62
NPHP4-203ENST00000378169 RAB5AP20339 215 aa11.19□□□□□ -0.62
NPHP4-203ENST00000378169 WNT5AP41221 380 aa11.19□□□□□ -0.62
NPHP4-203ENST00000378169 GFRA1P56159 465 aa11.19□□□□□ -0.62
NPHP4-203ENST00000378169 FOXF2Q12947 444 aa11.19□□□□□ -0.62
NPHP4-203ENST00000378169 ZNF273Q14593 569 aa11.19□□□□□ -0.62
NPHP4-203ENST00000378169 SLC16A13Q7RTY0 426 aa11.19□□□□□ -0.62
NPHP4-203ENST00000378169 C5orf24Q7Z6I8 188 aa11.19□□□□□ -0.62
NPHP4-203ENST00000378169 OR13A1Q8NGR1 328 aa11.19□□□□□ -0.62
NPHP4-203ENST00000378169 TXN2Q99757 166 aa11.19□□□□□ -0.62
NPHP4-203ENST00000378169 TECRQ9NZ01 308 aaKnown RBP11.19□□□□□ -0.62
NPHP4-203ENST00000378169 AMMECR1Q9Y4X0 333 aaPredicted RBP11.19□□□□□ -0.62
NPHP4-203ENST00000378169 KIAA1324LA8MWY0 1029 aaPredicted RBP11.18□□□□□ -0.62
NPHP4-203ENST00000378169 PLAUP00749 431 aa11.18□□□□□ -0.62
NPHP4-203ENST00000378169 UCNP55089 124 aa11.18□□□□□ -0.62
NPHP4-203ENST00000378169 H1FOOQ8IZA3 346 aaPredicted RBP11.18□□□□□ -0.62
NPHP4-203ENST00000378169 NPVFQ9HCQ7 196 aa11.18□□□□□ -0.62
NPHP4-203ENST00000378169 IL19Q9UHD0 177 aa11.18□□□□□ -0.62
NPHP4-203ENST00000378169 IGKV1-27A0A075B6S5 117 aa11.18□□□□□ -0.62
NPHP4-203ENST00000378169 IGSF23A1L1A6 192 aa11.18□□□□□ -0.62
NPHP4-203ENST00000378169 SUMO1P63165 101 aaKnown RBP11.18□□□□□ -0.62
NPHP4-203ENST00000378169 KHDC3LQ587J8 217 aa11.18□□□□□ -0.62
NPHP4-203ENST00000378169 ACP7Q6ZNF0 438 aa11.18□□□□□ -0.62
NPHP4-203ENST00000378169 FAM216BQ8N7L0 139 aa11.18□□□□□ -0.62
NPHP4-203ENST00000378169 SIGLECL1Q8N7X8 197 aa11.18□□□□□ -0.62
NPHP4-203ENST00000378169 OR2T10Q8NGZ9 312 aa11.18□□□□□ -0.62
NPHP4-203ENST00000378169 MEGF10Q96KG7 1140 aa11.18□□□□□ -0.62
NPHP4-203ENST00000378169 PNRC2Q9NPJ4 139 aaKnown RBP11.18□□□□□ -0.62
NPHP4-203ENST00000378169 ZDHHC8Q9ULC8 765 aa11.18□□□□□ -0.62
NPHP4-203ENST00000378169 TECTAO75443 2155 aa11.18□□□□□ -0.62
NPHP4-203ENST00000378169 J3QW42 95 aa11.18□□□□□ -0.62
NPHP4-203ENST00000378169 FCN1O00602 326 aa11.18□□□□□ -0.62
NPHP4-203ENST00000378169 HSBP1O75506 76 aa11.18□□□□□ -0.62
NPHP4-203ENST00000378169 SPCS3P61009 180 aa11.18□□□□□ -0.62
NPHP4-203ENST00000378169 ARL16Q0P5N6 197 aa11.18□□□□□ -0.62
NPHP4-203ENST00000378169 MIC13Q5XKP0 118 aa11.18□□□□□ -0.62
NPHP4-203ENST00000378169 FAM166AQ6J272 317 aa11.18□□□□□ -0.62
NPHP4-203ENST00000378169 DHRS11Q6UWP2 260 aa11.18□□□□□ -0.62
NPHP4-203ENST00000378169 LHFPL5Q8TAF8 219 aa11.18□□□□□ -0.62
NPHP4-203ENST00000378169 PLPPR1Q8TBJ4 325 aa11.18□□□□□ -0.62
NPHP4-203ENST00000378169 MANBALQ9NQG1 85 aa11.18□□□□□ -0.62
NPHP4-203ENST00000378169 PXMP4Q9Y6I8 212 aa11.18□□□□□ -0.62
NPHP4-203ENST00000378169 PLXNA2O75051 1894 aa11.18□□□□□ -0.62
NPHP4-203ENST00000378169 C20orf202A1L168 122 aa11.17□□□□□ -0.62
NPHP4-203ENST00000378169 F8VVB4 439 aa11.17□□□□□ -0.62
NPHP4-203ENST00000378169 F8VWA3 439 aa11.17□□□□□ -0.62
NPHP4-203ENST00000378169 SLC25A17O43808 307 aa11.17□□□□□ -0.62
NPHP4-203ENST00000378169 FBP1P09467 338 aa11.17□□□□□ -0.62
NPHP4-203ENST00000378169 HIST1H3AP68431 136 aa11.17□□□□□ -0.62
NPHP4-203ENST00000378169 OR4F17Q8NGA8 305 aa11.17□□□□□ -0.62
NPHP4-203ENST00000378169 TNFRSF19Q9NS68 423 aa11.17□□□□□ -0.62
NPHP4-203ENST00000378169 ZNF581Q9P0T4 197 aa11.17□□□□□ -0.62
NPHP4-203ENST00000378169 LY6G6EA0A0G2JKS1 128 aa11.17□□□□□ -0.62
NPHP4-203ENST00000378169 OR10J1P30954 320 aa11.17□□□□□ -0.62
NPHP4-203ENST00000378169 KRTDAPP60985 99 aa11.17□□□□□ -0.62
NPHP4-203ENST00000378169 ASCL5Q7RTU5 278 aa11.17□□□□□ -0.62
NPHP4-203ENST00000378169 AAMDCQ9H7C9 122 aa11.17□□□□□ -0.62
NPHP4-203ENST00000378169 HEXA-AS1Q9H8Q6 139 aa11.17□□□□□ -0.62
NPHP4-203ENST00000378169 U3KQA8 63 aa11.17□□□□□ -0.62
NPHP4-203ENST00000378169 GNG7O60262 68 aa11.17□□□□□ -0.62
NPHP4-203ENST00000378169 PMCHP20382 165 aa11.17□□□□□ -0.62
NPHP4-203ENST00000378169 UCP1P25874 307 aa11.17□□□□□ -0.62
NPHP4-203ENST00000378169 GCSAMQ8N6F7 178 aa11.17□□□□□ -0.62
NPHP4-203ENST00000378169 ZDHHC16Q969W1 377 aa11.17□□□□□ -0.62
NPHP4-203ENST00000378169 NDFIP1Q9BT67 221 aa11.17□□□□□ -0.62
NPHP4-203ENST00000378169 RNF126Q9BV68 326 aa11.17□□□□□ -0.62
NPHP4-203ENST00000378169 RPRMQ9NS64 109 aa11.17□□□□□ -0.62
NPHP4-203ENST00000378169 THYN1Q9P016 225 aa11.17□□□□□ -0.62
NPHP4-203ENST00000378169 DOCK11Q5JSL3 2073 aa11.17□□□□□ -0.62
NPHP4-203ENST00000378169 PRR14LQ5THK1 2151 aa11.17□□□□□ -0.62
NPHP4-203ENST00000378169 E9PQ18 207 aa11.17□□□□□ -0.62
NPHP4-203ENST00000378169 GPR6P46095 362 aaPredicted RBP11.17□□□□□ -0.62
NPHP4-203ENST00000378169 RND3P61587 244 aa11.17□□□□□ -0.62
NPHP4-203ENST00000378169 OR10G8Q8NGN5 311 aa11.17□□□□□ -0.62
NPHP4-203ENST00000378169 SIRT7Q9NRC8 400 aa11.17□□□□□ -0.62
NPHP4-203ENST00000378169 XKRY2A2RUG3 117 aa11.16□□□□□ -0.62
NPHP4-203ENST00000378169 CD40P25942 277 aa11.16□□□□□ -0.62
NPHP4-203ENST00000378169 TMPRSS3P57727 454 aa11.16□□□□□ -0.62
NPHP4-203ENST00000378169 LDLRAD3Q86YD5 345 aa11.16□□□□□ -0.62
NPHP4-203ENST00000378169 RAB24Q969Q5 203 aa11.16□□□□□ -0.62
NPHP4-203ENST00000378169 ASCL3Q9NQ33 180 aa11.16□□□□□ -0.62
NPHP4-203ENST00000378169 TMEM167BQ9NRX6 74 aa11.16□□□□□ -0.62
NPHP4-203ENST00000378169 ZNF586Q9NXT0 402 aa11.16□□□□□ -0.62
NPHP4-203ENST00000378169 CSPG4Q6UVK1 2322 aa11.16□□□□□ -0.62
NPHP4-203ENST00000378169 C17orf98A8MV24 154 aa11.16□□□□□ -0.62
NPHP4-203ENST00000378169 LDLRAD4O15165 306 aa11.16□□□□□ -0.62
NPHP4-203ENST00000378169 ARF6P62330 175 aa11.16□□□□□ -0.62
NPHP4-203ENST00000378169 SLC35E4Q6ICL7 350 aa11.16□□□□□ -0.62
NPHP4-203ENST00000378169 TCF19Q9Y242 345 aa11.16□□□□□ -0.62
NPHP4-203ENST00000378169 IGKV3D-15A0A087WSY6 115 aa11.16□□□□□ -0.62
NPHP4-203ENST00000378169 DANCRP0C864 163 aa11.16□□□□□ -0.62
NPHP4-203ENST00000378169 MEF2BQ02080 365 aaPredicted RBP11.16□□□□□ -0.62
NPHP4-203ENST00000378169 AARDQ4LEZ3 155 aa11.16□□□□□ -0.62
NPHP4-203ENST00000378169 PDPNQ86YL7 162 aa11.16□□□□□ -0.62
NPHP4-203ENST00000378169 COA4Q9NYJ1 87 aa11.16□□□□□ -0.62
NPHP4-203ENST00000378169 OTOGLQ3ZCN5 2332 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms