RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 ZNF429Q86V71 674 aa7.95□□□□□ -1.14
TRIM39-202ENST00000376659 THNSL2Q86YJ6 484 aa7.95□□□□□ -1.14
TRIM39-202ENST00000376659 C1orf174Q8IYL3 243 aa7.95□□□□□ -1.14
TRIM39-202ENST00000376659 DCTN5Q9BTE1 182 aa7.95□□□□□ -1.14
TRIM39-202ENST00000376659 ZNF665Q9H7R5 613 aa7.95□□□□□ -1.14
TRIM39-202ENST00000376659 OTOGLQ3ZCN5 2332 aa7.94□□□□□ -1.14
TRIM39-202ENST00000376659 OR9G9P0C7N8 305 aa7.94□□□□□ -1.14
TRIM39-202ENST00000376659 DDTP30046 118 aa7.94□□□□□ -1.14
TRIM39-202ENST00000376659 VDAC2P45880 294 aaPredicted RBP7.94□□□□□ -1.14
TRIM39-202ENST00000376659 UBE2NP61088 152 aaKnown RBP7.94□□□□□ -1.14
TRIM39-202ENST00000376659 GNB2P62879 340 aa7.94□□□□□ -1.14
TRIM39-202ENST00000376659 TGFBR3Q03167 851 aa7.94□□□□□ -1.14
TRIM39-202ENST00000376659 MRPL49Q13405 166 aaKnown RBP7.94□□□□□ -1.14
TRIM39-202ENST00000376659 TMEM249Q2WGJ8 235 aa7.94□□□□□ -1.14
TRIM39-202ENST00000376659 ZNF66Q6ZN08 573 aa7.94□□□□□ -1.14
TRIM39-202ENST00000376659 GALMQ96C23 342 aa7.94□□□□□ -1.14
TRIM39-202ENST00000376659 C2orf88Q9BSF0 95 aa7.94□□□□□ -1.14
TRIM39-202ENST00000376659 SH3BGRL2Q9UJC5 107 aa7.94□□□□□ -1.14
TRIM39-202ENST00000376659 ZNF727A8MUV8 499 aa7.94□□□□□ -1.14
TRIM39-202ENST00000376659 TMPRSS3P57727 454 aa7.94□□□□□ -1.14
TRIM39-202ENST00000376659 DLK1P80370 383 aa7.94□□□□□ -1.14
TRIM39-202ENST00000376659 TFF3Q07654 80 aa7.94□□□□□ -1.14
TRIM39-202ENST00000376659 ZNF343Q6P1L6 599 aa7.94□□□□□ -1.14
TRIM39-202ENST00000376659 UNQ6494/PRO21346Q6UXR6 183 aa7.94□□□□□ -1.14
TRIM39-202ENST00000376659 BHLHA15Q7RTS1 189 aaPredicted RBP7.94□□□□□ -1.14
TRIM39-202ENST00000376659 FAM24BQ8N5W8 94 aa7.94□□□□□ -1.14
TRIM39-202ENST00000376659 P2RX4Q99571 388 aa7.94□□□□□ -1.14
TRIM39-202ENST00000376659 MSL2Q9HCI7 577 aa7.94□□□□□ -1.14
TRIM39-202ENST00000376659 FZR1Q9UM11 496 aa7.94□□□□□ -1.14
TRIM39-202ENST00000376659 GOLT1BQ9Y3E0 138 aa7.94□□□□□ -1.14
TRIM39-202ENST00000376659 HRNRQ86YZ3 2850 aaPredicted RBP7.94□□□□□ -1.14
TRIM39-202ENST00000376659 GVINP1Q7Z2Y8 2422 aa7.94□□□□□ -1.14
TRIM39-202ENST00000376659 TRAV17A0A0B4J275 112 aa7.94□□□□□ -1.14
TRIM39-202ENST00000376659 A0A1B0GV50 99 aa7.94□□□□□ -1.14
TRIM39-202ENST00000376659 SEC14L6B5MCN3 397 aa7.94□□□□□ -1.14
TRIM39-202ENST00000376659 K7EM74 188 aa7.94□□□□□ -1.14
TRIM39-202ENST00000376659 ITGB1BP1O14713 200 aa7.94□□□□□ -1.14
TRIM39-202ENST00000376659 PRH1P02810 166 aa7.94□□□□□ -1.14
TRIM39-202ENST00000376659 CCL11P51671 97 aa7.94□□□□□ -1.14
TRIM39-202ENST00000376659 TLE4Q04727 773 aa7.94□□□□□ -1.14
TRIM39-202ENST00000376659 MORN2Q502X0 79 aa7.94□□□□□ -1.14
TRIM39-202ENST00000376659 MRGPRDQ8TDS7 321 aa7.94□□□□□ -1.14
TRIM39-202ENST00000376659 SIRT7Q9NRC8 400 aa7.94□□□□□ -1.14
TRIM39-202ENST00000376659 RNF212BA8MTL3 300 aa7.93□□□□□ -1.14
TRIM39-202ENST00000376659 NCOR1O75376 2440 aa7.93□□□□□ -1.14
TRIM39-202ENST00000376659 NUTF2P61970 127 aaKnown RBP7.93□□□□□ -1.14
TRIM39-202ENST00000376659 P2RY6Q15077 328 aa7.93□□□□□ -1.14
TRIM39-202ENST00000376659 BTNL3Q6UXE8 466 aa7.93□□□□□ -1.14
TRIM39-202ENST00000376659 Q6ZS92 163 aa7.93□□□□□ -1.14
TRIM39-202ENST00000376659 SDF2L1Q9HCN8 221 aa7.93□□□□□ -1.14
TRIM39-202ENST00000376659 TSTD3H0UI37 97 aa7.93□□□□□ -1.14
TRIM39-202ENST00000376659 HSPA12AO43301 675 aa7.93□□□□□ -1.14
TRIM39-202ENST00000376659 YPEL1O60688 119 aa7.93□□□□□ -1.14
TRIM39-202ENST00000376659 ZG16O60844 167 aa7.93□□□□□ -1.14
TRIM39-202ENST00000376659 SLC38A11Q08AI6 406 aa7.93□□□□□ -1.14
TRIM39-202ENST00000376659 TCF15Q12870 199 aa7.93□□□□□ -1.14
TRIM39-202ENST00000376659 LBHQ53QV2 105 aaPredicted RBP7.93□□□□□ -1.14
TRIM39-202ENST00000376659 KRBOX4Q5JUW0 171 aa7.93□□□□□ -1.14
TRIM39-202ENST00000376659 NCMAPQ5T1S8 102 aa7.93□□□□□ -1.14
TRIM39-202ENST00000376659 TPRX1Q8N7U7 411 aa7.93□□□□□ -1.14
TRIM39-202ENST00000376659 YPEL2Q96QA6 119 aa7.93□□□□□ -1.14
TRIM39-202ENST00000376659 PYGO2Q9BRQ0 406 aa7.93□□□□□ -1.14
TRIM39-202ENST00000376659 CLN8Q9UBY8 286 aa7.93□□□□□ -1.14
TRIM39-202ENST00000376659 HBE1P02100 147 aa7.92□□□□□ -1.14
TRIM39-202ENST00000376659 CEACAM8P31997 349 aaPredicted RBP7.92□□□□□ -1.14
TRIM39-202ENST00000376659 RTP5Q14D33 572 aa7.92□□□□□ -1.14
TRIM39-202ENST00000376659 SOHLH1Q5JUK2 328 aa7.92□□□□□ -1.14
TRIM39-202ENST00000376659 NCR3LG1Q68D85 454 aa7.92□□□□□ -1.14
TRIM39-202ENST00000376659 STUMQ69YW2 141 aa7.92□□□□□ -1.14
TRIM39-202ENST00000376659 DUX4L9Q6RFH8 374 aaPredicted RBP7.92□□□□□ -1.14
TRIM39-202ENST00000376659 RBMXL3Q8N7X1 1067 aaKnown RBP7.92□□□□□ -1.14
TRIM39-202ENST00000376659 SNIP1Q8TAD8 396 aaKnown RBP7.92□□□□□ -1.14
TRIM39-202ENST00000376659 TP53TG5Q9Y2B4 290 aa7.92□□□□□ -1.14
TRIM39-202ENST00000376659 USF3Q68DE3 2245 aa7.92□□□□□ -1.14
TRIM39-202ENST00000376659 AHCTF1Q8WYP5 2266 aa7.92□□□□□ -1.14
TRIM39-202ENST00000376659 HNF1AP20823 631 aa7.92□□□□□ -1.14
TRIM39-202ENST00000376659 NPPCP23582 126 aa7.92□□□□□ -1.14
TRIM39-202ENST00000376659 S100A2P29034 98 aa7.92□□□□□ -1.14
TRIM39-202ENST00000376659 CDPF1Q6NVV7 123 aa7.92□□□□□ -1.14
TRIM39-202ENST00000376659 QTRT1Q9BXR0 403 aaKnown RBP7.92□□□□□ -1.14
TRIM39-202ENST00000376659 NPCDR1Q9BY65 106 aa7.92□□□□□ -1.14
TRIM39-202ENST00000376659 KCNIP1Q9NZI2 227 aa7.92□□□□□ -1.14
TRIM39-202ENST00000376659 JPT1Q9UK76 154 aa7.92□□□□□ -1.14
TRIM39-202ENST00000376659 CSMD1Q96PZ7 3565 aa7.92□□□□□ -1.14
TRIM39-202ENST00000376659 RELBQ01201 579 aa7.92□□□□□ -1.14
TRIM39-202ENST00000376659 SMIM21Q3B7S5 101 aa7.92□□□□□ -1.14
TRIM39-202ENST00000376659 AKR1C8PQ5T2L2 129 aa7.92□□□□□ -1.14
TRIM39-202ENST00000376659 TRAT1Q6PIZ9 186 aa7.92□□□□□ -1.14
TRIM39-202ENST00000376659 OR52E5Q8NH55 327 aa7.92□□□□□ -1.14
TRIM39-202ENST00000376659 RNF150Q9ULK6 438 aa7.92□□□□□ -1.14
TRIM39-202ENST00000376659 KCNS2Q9ULS6 477 aa7.92□□□□□ -1.14
TRIM39-202ENST00000376659 DYSFO75923 2080 aa7.92□□□□□ -1.14
TRIM39-202ENST00000376659 TGIF2-C20orf24A0A0A6YYL0 155 aa7.91□□□□□ -1.14
TRIM39-202ENST00000376659 UBE2L5PA0A1B0GUS4 154 aa7.91□□□□□ -1.14
TRIM39-202ENST00000376659 TNFRSF13BO14836 293 aaPredicted RBP7.91□□□□□ -1.14
TRIM39-202ENST00000376659 RBFOX2O43251 390 aaKnown RBP eCLIP7.91□□□□□ -1.14
TRIM39-202ENST00000376659 PRDX2P32119 198 aa7.91□□□□□ -1.14
TRIM39-202ENST00000376659 TDGF1P3P51864 188 aa7.91□□□□□ -1.14
TRIM39-202ENST00000376659 ZNF816Q0VGE8 651 aaPredicted RBP7.91□□□□□ -1.14
TRIM39-202ENST00000376659 PYY3Q5JQD4 70 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms