RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 HSD17B12Q53GQ0 312 aa10.66□□□□□ -0.7
PTCH1-202ENST00000375271 PQLC1Q8N2U9 271 aa10.66□□□□□ -0.7
PTCH1-202ENST00000375271 NECAP1Q8NC96 275 aa10.66□□□□□ -0.7
PTCH1-202ENST00000375271 ADAD2Q8NCV1 583 aaKnown RBP10.66□□□□□ -0.7
PTCH1-202ENST00000375271 OR6M1Q8NGM8 313 aa10.66□□□□□ -0.7
PTCH1-202ENST00000375271 OR10J5Q8NHC4 309 aa10.66□□□□□ -0.7
PTCH1-202ENST00000375271 SRSF12Q8WXF0 261 aaKnown RBP10.66□□□□□ -0.7
PTCH1-202ENST00000375271 PHYHIPQ92561 330 aa10.66□□□□□ -0.7
PTCH1-202ENST00000375271 ADTRPQ96IZ2 230 aa10.66□□□□□ -0.7
PTCH1-202ENST00000375271 GINS4Q9BRT9 223 aa10.66□□□□□ -0.7
PTCH1-202ENST00000375271 DCUN1D5Q9BTE7 237 aa10.66□□□□□ -0.7
PTCH1-202ENST00000375271 KCNK15Q9H427 330 aa10.66□□□□□ -0.7
PTCH1-202ENST00000375271 Q9N2K0 584 aa10.66□□□□□ -0.7
PTCH1-202ENST00000375271 AKIP1Q9NQ31 210 aa10.66□□□□□ -0.7
PTCH1-202ENST00000375271 C2orf70A6NJV1 201 aa10.65□□□□□ -0.7
PTCH1-202ENST00000375271 GGCTO75223 188 aaKnown RBP10.65□□□□□ -0.7
PTCH1-202ENST00000375271 IGLV2-23P01705 113 aa10.65□□□□□ -0.7
PTCH1-202ENST00000375271 PRH1P02810 166 aa10.65□□□□□ -0.7
PTCH1-202ENST00000375271 CD3GP09693 182 aa10.65□□□□□ -0.7
PTCH1-202ENST00000375271 GSTT2P0CG29 244 aa10.65□□□□□ -0.7
PTCH1-202ENST00000375271 GSTT2BP0CG30 244 aa10.65□□□□□ -0.7
PTCH1-202ENST00000375271 UNC119Q13432 240 aa10.65□□□□□ -0.7
PTCH1-202ENST00000375271 TMEM177Q53S58 311 aa10.65□□□□□ -0.7
PTCH1-202ENST00000375271 C1orf100Q5SVJ3 147 aa10.65□□□□□ -0.7
PTCH1-202ENST00000375271 ZNF57Q68EA5 555 aaPredicted RBP10.65□□□□□ -0.7
PTCH1-202ENST00000375271 AHSA2Q719I0 299 aa10.65□□□□□ -0.7
PTCH1-202ENST00000375271 TEX45Q8NA69 505 aa10.65□□□□□ -0.7
PTCH1-202ENST00000375271 OR4A4PQ8NGN8 299 aa10.65□□□□□ -0.7
PTCH1-202ENST00000375271 WDR89Q96FK6 387 aaPredicted RBP10.65□□□□□ -0.7
PTCH1-202ENST00000375271 ZNF230Q9UIE0 474 aaPredicted RBP10.65□□□□□ -0.7
PTCH1-202ENST00000375271 HSF4Q9ULV5 492 aa10.65□□□□□ -0.7
PTCH1-202ENST00000375271 PLECQ15149 4684 aaKnown RBP10.64□□□□□ -0.71
PTCH1-202ENST00000375271 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.64□□□□□ -0.71
PTCH1-202ENST00000375271 ZNF320A2RRD8 509 aa10.64□□□□□ -0.71
PTCH1-202ENST00000375271 ZNF785A8K8V0 405 aa10.64□□□□□ -0.71
PTCH1-202ENST00000375271 TMEM14DPA8MWL7 114 aa10.64□□□□□ -0.71
PTCH1-202ENST00000375271 SOCS1O15524 211 aa10.64□□□□□ -0.71
PTCH1-202ENST00000375271 FABP7O15540 132 aa10.64□□□□□ -0.71
PTCH1-202ENST00000375271 CRYZL1O95825 349 aa10.64□□□□□ -0.71
PTCH1-202ENST00000375271 KIR2DS2P43631 304 aa10.64□□□□□ -0.71
PTCH1-202ENST00000375271 MECP2P51608 486 aaKnown RBP10.64□□□□□ -0.71
PTCH1-202ENST00000375271 UBE2KP61086 200 aa10.64□□□□□ -0.71
PTCH1-202ENST00000375271 PRSS8Q16651 343 aa10.64□□□□□ -0.71
PTCH1-202ENST00000375271 C15orf32Q32M92 178 aa10.64□□□□□ -0.71
PTCH1-202ENST00000375271 FAM106AQ4KMX7 169 aa10.64□□□□□ -0.71
PTCH1-202ENST00000375271 IDO2Q6ZQW0 420 aa10.64□□□□□ -0.71
PTCH1-202ENST00000375271 TMEM217Q8N7C4 229 aa10.64□□□□□ -0.71
PTCH1-202ENST00000375271 OR56B1Q8NGI3 324 aa10.64□□□□□ -0.71
PTCH1-202ENST00000375271 S100A14Q9HCY8 104 aa10.64□□□□□ -0.71
PTCH1-202ENST00000375271 SDHAF2Q9NX18 166 aa10.64□□□□□ -0.71
PTCH1-202ENST00000375271 PPP5D1E7EU14 171 aa10.63□□□□□ -0.71
PTCH1-202ENST00000375271 PROP1O75360 226 aa10.63□□□□□ -0.71
PTCH1-202ENST00000375271 OR2J3O76001 311 aa10.63□□□□□ -0.71
PTCH1-202ENST00000375271 DHFRP00374 187 aa10.63□□□□□ -0.71
PTCH1-202ENST00000375271 CRYGBP07316 175 aa10.63□□□□□ -0.71
PTCH1-202ENST00000375271 APOC4P55056 127 aa10.63□□□□□ -0.71
PTCH1-202ENST00000375271 SSBP2P81877 361 aaPredicted RBP10.63□□□□□ -0.71
PTCH1-202ENST00000375271 P2RY14Q15391 338 aa10.63□□□□□ -0.71
PTCH1-202ENST00000375271 OR4A47Q6IF82 309 aa10.63□□□□□ -0.71
PTCH1-202ENST00000375271 RBPMS2Q6ZRY4 209 aaKnown RBP10.63□□□□□ -0.71
PTCH1-202ENST00000375271 CEACAM19Q7Z692 300 aa10.63□□□□□ -0.71
PTCH1-202ENST00000375271 MMD2Q8IY49 270 aa10.63□□□□□ -0.71
PTCH1-202ENST00000375271 ZNF485Q8NCK3 441 aa10.63□□□□□ -0.71
PTCH1-202ENST00000375271 OSR1Q8TAX0 266 aaPredicted RBP10.63□□□□□ -0.71
PTCH1-202ENST00000375271 ARHGAP5-AS1Q96IT6 56 aa10.63□□□□□ -0.71
PTCH1-202ENST00000375271 LPAR5Q9H1C0 372 aa10.63□□□□□ -0.71
PTCH1-202ENST00000375271 ZC4H2Q9NQZ6 224 aa10.63□□□□□ -0.71
PTCH1-202ENST00000375271 FAM53CQ9NYF3 392 aa10.63□□□□□ -0.71
PTCH1-202ENST00000375271 A0A0J9YWU9 116 aa10.62□□□□□ -0.71
PTCH1-202ENST00000375271 SCAF4O95104 1147 aaKnown RBP10.62□□□□□ -0.71
PTCH1-202ENST00000375271 ARL3P36405 182 aa10.62□□□□□ -0.71
PTCH1-202ENST00000375271 RAB11BQ15907 218 aa10.62□□□□□ -0.71
PTCH1-202ENST00000375271 LRRTM1Q86UE6 522 aa10.62□□□□□ -0.71
PTCH1-202ENST00000375271 SLC38A6Q8IZM9 456 aa10.62□□□□□ -0.71
PTCH1-202ENST00000375271 C8orf59Q8N0T1 100 aaPredicted RBP10.62□□□□□ -0.71
PTCH1-202ENST00000375271 DHRSXQ8N5I4 330 aa10.62□□□□□ -0.71
PTCH1-202ENST00000375271 OVOL2Q9BRP0 275 aa10.62□□□□□ -0.71
PTCH1-202ENST00000375271 CENPOQ9BU64 300 aa10.62□□□□□ -0.71
PTCH1-202ENST00000375271 MND1Q9BWT6 205 aa10.62□□□□□ -0.71
PTCH1-202ENST00000375271 PECRQ9BY49 303 aa10.62□□□□□ -0.71
PTCH1-202ENST00000375271 KRTAP17-1Q9BYP8 105 aa10.62□□□□□ -0.71
PTCH1-202ENST00000375271 MRPS7Q9Y2R9 242 aaKnown RBP10.62□□□□□ -0.71
PTCH1-202ENST00000375271 A0A0A6YYD4 124 aa10.61□□□□□ -0.71
PTCH1-202ENST00000375271 LGALS9O00182 355 aa10.61□□□□□ -0.71
PTCH1-202ENST00000375271 OR2C1O95371 312 aa10.61□□□□□ -0.71
PTCH1-202ENST00000375271 HLA-AP01891 365 aaKnown RBP10.61□□□□□ -0.71
PTCH1-202ENST00000375271 CBLN1P23435 193 aa10.61□□□□□ -0.71
PTCH1-202ENST00000375271 BMI1P35226 326 aa10.61□□□□□ -0.71
PTCH1-202ENST00000375271 TALDO1P37837 337 aa10.61□□□□□ -0.71
PTCH1-202ENST00000375271 INSL4Q14641 139 aa10.61□□□□□ -0.71
PTCH1-202ENST00000375271 CDK10Q15131 360 aa10.61□□□□□ -0.71
PTCH1-202ENST00000375271 MED22Q15528 200 aa10.61□□□□□ -0.71
PTCH1-202ENST00000375271 CEMP1Q6PRD7 247 aaPredicted RBP10.61□□□□□ -0.71
PTCH1-202ENST00000375271 TMEM61Q8N0U2 210 aa10.61□□□□□ -0.71
PTCH1-202ENST00000375271 BPIFB6Q8NFQ5 453 aa10.61□□□□□ -0.71
PTCH1-202ENST00000375271 FBXL7Q9UJT9 491 aa10.61□□□□□ -0.71
PTCH1-202ENST00000375271 ZNF257Q9Y2Q1 563 aa10.61□□□□□ -0.71
PTCH1-202ENST00000375271 PRELID3BQ9Y3B1 194 aa10.61□□□□□ -0.71
PTCH1-202ENST00000375271 SELENOKQ9Y6D0 94 aa10.61□□□□□ -0.71
PTCH1-202ENST00000375271 TRBV9A0A0B4J1U6 114 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms