RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 NFYBP25208 207 aa7.5□□□□□ -1.21
UBR4-201ENST00000375218 GPR183P32249 361 aa7.5□□□□□ -1.21
UBR4-201ENST00000375218 SLC18B1Q6NT16 456 aa7.5□□□□□ -1.21
UBR4-201ENST00000375218 ANKRD37Q7Z713 158 aa7.5□□□□□ -1.21
UBR4-201ENST00000375218 MSRB3Q8IXL7 192 aa7.5□□□□□ -1.21
UBR4-201ENST00000375218 OR7A2PQ8NGA2 310 aa7.5□□□□□ -1.21
UBR4-201ENST00000375218 VAMP8Q9BV40 100 aa7.5□□□□□ -1.21
UBR4-201ENST00000375218 TMEM222Q9H0R3 208 aa7.5□□□□□ -1.21
UBR4-201ENST00000375218 MRPL27Q9P0M9 148 aaKnown RBP7.5□□□□□ -1.21
UBR4-201ENST00000375218 DUSP13Q9UII6 198 aa7.5□□□□□ -1.21
UBR4-201ENST00000375218 AOC1P19801 751 aa7.5□□□□□ -1.21
UBR4-201ENST00000375218 G6PCP35575 357 aa7.5□□□□□ -1.21
UBR4-201ENST00000375218 H3F3AP84243 136 aa7.5□□□□□ -1.21
UBR4-201ENST00000375218 UNC119Q13432 240 aa7.5□□□□□ -1.21
UBR4-201ENST00000375218 SLC25A35Q3KQZ1 300 aa7.5□□□□□ -1.21
UBR4-201ENST00000375218 HIST3H2BBQ8N257 126 aa7.5□□□□□ -1.21
UBR4-201ENST00000375218 FKBP11Q9NYL4 201 aa7.5□□□□□ -1.21
UBR4-201ENST00000375218 CYSLTR1Q9Y271 337 aa7.5□□□□□ -1.21
UBR4-201ENST00000375218 ARID1BQ8NFD5 2236 aaPredicted RBP7.5□□□□□ -1.21
UBR4-201ENST00000375218 IGKV1-8A0A0C4DH67 115 aa7.5□□□□□ -1.21
UBR4-201ENST00000375218 NDUFB4O95168 129 aa7.5□□□□□ -1.21
UBR4-201ENST00000375218 CD8AP01732 235 aa7.5□□□□□ -1.21
UBR4-201ENST00000375218 APODP05090 189 aa7.5□□□□□ -1.21
UBR4-201ENST00000375218 HNRNPA3P51991 378 aaKnown RBP7.5□□□□□ -1.21
UBR4-201ENST00000375218 POLR2HP52434 150 aaKnown RBP7.5□□□□□ -1.21
UBR4-201ENST00000375218 HIST3H3Q16695 136 aa7.5□□□□□ -1.21
UBR4-201ENST00000375218 GLYATL3Q5SZD4 288 aa7.5□□□□□ -1.21
UBR4-201ENST00000375218 NEIL3Q8TAT5 605 aa7.5□□□□□ -1.21
UBR4-201ENST00000375218 TMEM204Q9BSN7 226 aa7.5□□□□□ -1.21
UBR4-201ENST00000375218 SFXN3Q9BWM7 321 aa7.5□□□□□ -1.21
UBR4-201ENST00000375218 MEPEQ9NQ76 525 aaPredicted RBP7.5□□□□□ -1.21
UBR4-201ENST00000375218 A0A0J9YW62 118 aa7.49□□□□□ -1.21
UBR4-201ENST00000375218 MYL12BO14950 172 aa7.49□□□□□ -1.21
UBR4-201ENST00000375218 KNG1P01042 644 aa7.49□□□□□ -1.21
UBR4-201ENST00000375218 SHC1P29353 583 aa7.49□□□□□ -1.21
UBR4-201ENST00000375218 GDF5P43026 501 aa7.49□□□□□ -1.21
UBR4-201ENST00000375218 TAS2R20P59543 309 aa7.49□□□□□ -1.21
UBR4-201ENST00000375218 MORN2Q502X0 79 aa7.49□□□□□ -1.21
UBR4-201ENST00000375218 TEPPQ6URK8 271 aa7.49□□□□□ -1.21
UBR4-201ENST00000375218 OR5AC2Q9NZP5 309 aa7.49□□□□□ -1.21
UBR4-201ENST00000375218 PGA3P0DJD8 388 aa7.49□□□□□ -1.21
UBR4-201ENST00000375218 PGAM2P15259 253 aa7.49□□□□□ -1.21
UBR4-201ENST00000375218 RPS10P46783 165 aaKnown RBP7.49□□□□□ -1.21
UBR4-201ENST00000375218 SLC38A11Q08AI6 406 aa7.49□□□□□ -1.21
UBR4-201ENST00000375218 DHRS2Q13268 280 aa7.49□□□□□ -1.21
UBR4-201ENST00000375218 TMEM244Q5VVB8 128 aa7.49□□□□□ -1.21
UBR4-201ENST00000375218 FGF11Q92914 225 aa7.49□□□□□ -1.21
UBR4-201ENST00000375218 OR51E2Q9H255 320 aa7.49□□□□□ -1.21
UBR4-201ENST00000375218 H3BP45 60 aa7.49□□□□□ -1.21
UBR4-201ENST00000375218 ARL6IP5O75915 188 aa7.49□□□□□ -1.21
UBR4-201ENST00000375218 SOD3P08294 240 aa7.49□□□□□ -1.21
UBR4-201ENST00000375218 FZD2Q14332 565 aa7.49□□□□□ -1.21
UBR4-201ENST00000375218 GINS1Q14691 196 aa7.49□□□□□ -1.21
UBR4-201ENST00000375218 ASPHD1Q5U4P2 390 aa7.49□□□□□ -1.21
UBR4-201ENST00000375218 AMMECR1LQ6DCA0 310 aa7.49□□□□□ -1.21
UBR4-201ENST00000375218 SIGLEC12Q96PQ1 595 aa7.49□□□□□ -1.21
UBR4-201ENST00000375218 REEP1Q9H902 201 aa7.49□□□□□ -1.21
UBR4-201ENST00000375218 DEPPQ9NTK1 212 aa7.49□□□□□ -1.21
UBR4-201ENST00000375218 PCTPQ9UKL6 214 aa7.49□□□□□ -1.21
UBR4-201ENST00000375218 CES1P1Q9UKY3 287 aa7.49□□□□□ -1.21
UBR4-201ENST00000375218 GCM2O75603 506 aaPredicted RBP7.49□□□□□ -1.21
UBR4-201ENST00000375218 LHX2P50458 406 aa7.49□□□□□ -1.21
UBR4-201ENST00000375218 ENTPD8Q5MY95 495 aa7.49□□□□□ -1.21
UBR4-201ENST00000375218 C22orf39Q6P5X5 142 aa7.49□□□□□ -1.21
UBR4-201ENST00000375218 C16orf82Q7Z2V1 217 aa7.49□□□□□ -1.21
UBR4-201ENST00000375218 OR5AP2Q8NGF4 316 aa7.49□□□□□ -1.21
UBR4-201ENST00000375218 RDH11Q8TC12 318 aa7.49□□□□□ -1.21
UBR4-201ENST00000375218 KCNIP2Q9NS61 270 aa7.49□□□□□ -1.21
UBR4-201ENST00000375218 ABCA7Q8IZY2 2146 aa7.48□□□□□ -1.21
UBR4-201ENST00000375218 H7C1H1 209 aa7.48□□□□□ -1.21
UBR4-201ENST00000375218 IZUMO4Q1ZYL8 232 aa7.48□□□□□ -1.21
UBR4-201ENST00000375218 ZNF695Q8IW36 515 aa7.48□□□□□ -1.21
UBR4-201ENST00000375218 LINC00528Q8N1L1 170 aa7.48□□□□□ -1.21
UBR4-201ENST00000375218 ZNF519Q8TB69 540 aa7.48□□□□□ -1.21
UBR4-201ENST00000375218 ZNF222Q9UK12 451 aa7.48□□□□□ -1.21
UBR4-201ENST00000375218 PLA2G2DQ9UNK4 145 aa7.48□□□□□ -1.21
UBR4-201ENST00000375218 EXPH5Q8NEV8 1989 aa7.48□□□□□ -1.21
UBR4-201ENST00000375218 SCN3AQ9NY46 2000 aa7.48□□□□□ -1.21
UBR4-201ENST00000375218 OR4C45A6NMZ5 311 aa7.48□□□□□ -1.21
UBR4-201ENST00000375218 CDK2P24941 298 aa7.48□□□□□ -1.21
UBR4-201ENST00000375218 IBA57Q5T440 356 aaKnown RBP7.48□□□□□ -1.21
UBR4-201ENST00000375218 ZNF730Q6ZMV8 503 aa7.48□□□□□ -1.21
UBR4-201ENST00000375218 ZNF740Q8NDX6 193 aa7.48□□□□□ -1.21
UBR4-201ENST00000375218 GPR21Q99679 349 aa7.48□□□□□ -1.21
UBR4-201ENST00000375218 ZNF629Q9UEG4 869 aaPredicted RBP7.48□□□□□ -1.21
UBR4-201ENST00000375218 OARD1Q9Y530 152 aa7.48□□□□□ -1.21
UBR4-201ENST00000375218 COL5A1P20908 1838 aaPredicted RBP7.48□□□□□ -1.21
UBR4-201ENST00000375218 SLC2A10O95528 541 aa7.48□□□□□ -1.21
UBR4-201ENST00000375218 ADRA2AP08913 450 aa7.48□□□□□ -1.21
UBR4-201ENST00000375218 SUB1P53999 127 aaKnown RBP eCLIP7.48□□□□□ -1.212e-7■■■□□ 17.7
UBR4-201ENST00000375218 ZNF92Q03936 586 aa7.48□□□□□ -1.21
UBR4-201ENST00000375218 TDRG1Q3Y452 100 aa7.48□□□□□ -1.21
UBR4-201ENST00000375218 TEX36Q5VZQ5 186 aa7.48□□□□□ -1.21
UBR4-201ENST00000375218 SLC25A48Q6ZT89 311 aaKnown RBP7.48□□□□□ -1.21
UBR4-201ENST00000375218 PPP1R27Q86WC6 154 aa7.48□□□□□ -1.21
UBR4-201ENST00000375218 METTL27Q8N6F8 245 aaPredicted RBP7.48□□□□□ -1.21
UBR4-201ENST00000375218 CARD19Q96LW7 228 aa7.48□□□□□ -1.21
UBR4-201ENST00000375218 SULT2B1O00204 365 aa7.47□□□□□ -1.21
UBR4-201ENST00000375218 GKN3PP0CG01 181 aa7.47□□□□□ -1.21
UBR4-201ENST00000375218 HIST1H3AP68431 136 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms