RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 A0A1W2PRS3 328 aa13.31□□□□□ -0.28
GTF3C4-201ENST00000372146 FXYD1O00168 92 aa13.31□□□□□ -0.28
GTF3C4-201ENST00000372146 FOXA3P55318 350 aaPredicted RBP13.31□□□□□ -0.28
GTF3C4-201ENST00000372146 PSG9Q00887 426 aa13.31□□□□□ -0.28
GTF3C4-201ENST00000372146 MMDQ15546 238 aa13.31□□□□□ -0.28
GTF3C4-201ENST00000372146 KBTBD11-OT1A0A1B0GTJ5 212 aa13.31□□□□□ -0.28
GTF3C4-201ENST00000372146 REG1BP48304 166 aa13.31□□□□□ -0.28
GTF3C4-201ENST00000372146 KLK8O60259 260 aa13.31□□□□□ -0.28
GTF3C4-201ENST00000372146 CRYBB3P26998 211 aa13.31□□□□□ -0.28
GTF3C4-201ENST00000372146 SCNM1Q9BWG6 230 aa13.31□□□□□ -0.28
GTF3C4-201ENST00000372146 IGKV6-21A0A0C4DH24 114 aa13.31□□□□□ -0.28
GTF3C4-201ENST00000372146 DANCRP0C864 163 aa13.31□□□□□ -0.28
GTF3C4-201ENST00000372146 SRD5A2P31213 254 aa13.31□□□□□ -0.28
GTF3C4-201ENST00000372146 ASB5Q8WWX0 329 aa13.31□□□□□ -0.28
GTF3C4-201ENST00000372146 SPSB4Q96A44 273 aa13.31□□□□□ -0.28
GTF3C4-201ENST00000372146 A0A1B0GTL3 188 aa13.31□□□□□ -0.28
GTF3C4-201ENST00000372146 MIC13Q5XKP0 118 aa13.31□□□□□ -0.28
GTF3C4-201ENST00000372146 ORAOV1Q8WV07 137 aa13.31□□□□□ -0.28
GTF3C4-201ENST00000372146 IGHV3OR15-7A0A075B7D8 119 aa13.3□□□□□ -0.28
GTF3C4-201ENST00000372146 TRGV8A0A0C4DH27 118 aa13.3□□□□□ -0.28
GTF3C4-201ENST00000372146 GPR6P46095 362 aaPredicted RBP13.3□□□□□ -0.28
GTF3C4-201ENST00000372146 HIKESHIQ53FT3 197 aa13.3□□□□□ -0.28
GTF3C4-201ENST00000372146 ASCL5Q7RTU5 278 aa13.3□□□□□ -0.28
GTF3C4-201ENST00000372146 IP6K3Q96PC2 410 aa13.3□□□□□ -0.28
GTF3C4-201ENST00000372146 DMKNQ6E0U4 476 aaPredicted RBP13.3□□□□□ -0.28
GTF3C4-201ENST00000372146 ANKRD33Q7Z3H0 272 aa13.3□□□□□ -0.28
GTF3C4-201ENST00000372146 TMEM106BQ9NUM4 274 aa13.3□□□□□ -0.28
GTF3C4-201ENST00000372146 SLC25A15Q9Y619 301 aa13.3□□□□□ -0.28
GTF3C4-201ENST00000372146 C17orf51A8MQB3 221 aa13.3□□□□□ -0.28
GTF3C4-201ENST00000372146 CNRIP1Q96F85 164 aaPredicted RBP13.3□□□□□ -0.28
GTF3C4-201ENST00000372146 DDX60LQ5H9U9 1706 aaKnown RBP13.3□□□□□ -0.28
GTF3C4-201ENST00000372146 PARP14Q460N5 1801 aa13.3□□□□□ -0.28
GTF3C4-201ENST00000372146 ATP5LO75964 103 aa13.3□□□□□ -0.28
GTF3C4-201ENST00000372146 HOXB1P14653 301 aaPredicted RBP13.3□□□□□ -0.28
GTF3C4-201ENST00000372146 CD300LDQ6UXZ3 194 aa13.3□□□□□ -0.28
GTF3C4-201ENST00000372146 MRGPRX3Q96LB0 322 aa13.3□□□□□ -0.28
GTF3C4-201ENST00000372146 IMMP2LQ96T52 175 aa13.3□□□□□ -0.28
GTF3C4-201ENST00000372146 DLEC1Q9Y238 1755 aa13.3□□□□□ -0.28
GTF3C4-201ENST00000372146 OR52M1Q8NGK5 317 aa13.3□□□□□ -0.28
GTF3C4-201ENST00000372146 PRTN3P24158 256 aa13.3□□□□□ -0.28
GTF3C4-201ENST00000372146 NFAM1Q8NET5 270 aaPredicted RBP13.3□□□□□ -0.28
GTF3C4-201ENST00000372146 PRDM14Q9GZV8 571 aa13.3□□□□□ -0.28
GTF3C4-201ENST00000372146 C1RLQ9NZP8 487 aa13.3□□□□□ -0.28
GTF3C4-201ENST00000372146 PGPA6NDG6 321 aa13.3□□□□□ -0.28
GTF3C4-201ENST00000372146 H0Y980 276 aa13.3□□□□□ -0.28
GTF3C4-201ENST00000372146 TNFSF14O43557 240 aa13.3□□□□□ -0.28
GTF3C4-201ENST00000372146 GPX1P07203 203 aa13.3□□□□□ -0.28
GTF3C4-201ENST00000372146 SPINK8P0C7L1 97 aa13.3□□□□□ -0.28
GTF3C4-201ENST00000372146 ACSF3Q4G176 576 aaPredicted RBP13.3□□□□□ -0.28
GTF3C4-201ENST00000372146 FAM117AQ9C073 453 aa13.3□□□□□ -0.28
GTF3C4-201ENST00000372146 C10orf35Q96D05 121 aa13.29□□□□□ -0.28
GTF3C4-201ENST00000372146 SIT1Q9Y3P8 196 aa13.29□□□□□ -0.28
GTF3C4-201ENST00000372146 NAV3Q8IVL0 2385 aa13.29□□□□□ -0.28
GTF3C4-201ENST00000372146 DSPPQ9NZW4 1301 aa13.29□□□□□ -0.28
GTF3C4-201ENST00000372146 GGTLC3B5MD39 225 aa13.29□□□□□ -0.28
GTF3C4-201ENST00000372146 CDC42EP2O14613 210 aa13.29□□□□□ -0.28
GTF3C4-201ENST00000372146 LEPP41159 167 aa13.29□□□□□ -0.28
GTF3C4-201ENST00000372146 THSD4Q6ZMP0 1018 aa13.29□□□□□ -0.28
GTF3C4-201ENST00000372146 OR2H1Q9GZK4 316 aa13.29□□□□□ -0.28
GTF3C4-201ENST00000372146 TMEM52BQ4KMG9 183 aa13.29□□□□□ -0.28
GTF3C4-201ENST00000372146 GFRALQ6UXV0 394 aa13.29□□□□□ -0.28
GTF3C4-201ENST00000372146 GOLT1AQ6ZVE7 132 aa13.29□□□□□ -0.28
GTF3C4-201ENST00000372146 TAF15Q92804 592 aaKnown RBP eCLIP13.29□□□□□ -0.28
GTF3C4-201ENST00000372146 MRGPRX1Q96LB2 322 aa13.29□□□□□ -0.28
GTF3C4-201ENST00000372146 GNRHR2Q96P88 292 aa13.29□□□□□ -0.28
GTF3C4-201ENST00000372146 MRPL20Q9BYC9 149 aaKnown RBP13.29□□□□□ -0.28
GTF3C4-201ENST00000372146 TNCP24821 2201 aa13.28□□□□□ -0.28
GTF3C4-201ENST00000372146 GREB1LQ9C091 1923 aaPredicted RBP13.28□□□□□ -0.28
GTF3C4-201ENST00000372146 PPIAL4EA0A075B759 164 aa13.28□□□□□ -0.28
GTF3C4-201ENST00000372146 WNT9BO14905 357 aa13.28□□□□□ -0.28
GTF3C4-201ENST00000372146 PPIAL4FP0DN26 164 aa13.28□□□□□ -0.28
GTF3C4-201ENST00000372146 FAM219BQ5XKK7 198 aa13.28□□□□□ -0.28
GTF3C4-201ENST00000372146 TMEM30AQ9NV96 361 aa13.28□□□□□ -0.28
GTF3C4-201ENST00000372146 PPIAL4AQ9Y536 164 aa13.28□□□□□ -0.28
GTF3C4-201ENST00000372146 IGKV3D-20A0A0C4DH25 116 aa13.28□□□□□ -0.28
GTF3C4-201ENST00000372146 SSBP2P81877 361 aaPredicted RBP13.28□□□□□ -0.28
GTF3C4-201ENST00000372146 ZNF645Q8N7E2 425 aa13.28□□□□□ -0.28
GTF3C4-201ENST00000372146 EFNB2P52799 333 aa13.28□□□□□ -0.28
GTF3C4-201ENST00000372146 NABP2Q9BQ15 211 aa13.28□□□□□ -0.28
GTF3C4-201ENST00000372146 ZFP64Q9NPA5 681 aa13.28□□□□□ -0.28
GTF3C4-201ENST00000372146 PKD1L3Q7Z443 1732 aa13.28□□□□□ -0.28
GTF3C4-201ENST00000372146 COL10A1Q03692 680 aa13.28□□□□□ -0.28
GTF3C4-201ENST00000372146 SYNGR3O43761 229 aa13.28□□□□□ -0.28
GTF3C4-201ENST00000372146 FAM53BQ14153 422 aa13.28□□□□□ -0.28
GTF3C4-201ENST00000372146 DEFB109BQ30KR1 87 aa13.28□□□□□ -0.28
GTF3C4-201ENST00000372146 KLHDC9Q8NEP7 349 aa13.28□□□□□ -0.28
GTF3C4-201ENST00000372146 BTAF1O14981 1849 aa13.28□□□□□ -0.28
GTF3C4-201ENST00000372146 CAPZBP47756 277 aa13.28□□□□□ -0.28
GTF3C4-201ENST00000372146 ZBTB34Q8NCN2 500 aa13.28□□□□□ -0.28
GTF3C4-201ENST00000372146 PSME4Q14997 1843 aa13.27□□□□□ -0.28
GTF3C4-201ENST00000372146 DDB2Q92466 427 aa13.27□□□□□ -0.28
GTF3C4-201ENST00000372146 IGKV6D-21A0A0A0MT36 114 aa13.27□□□□□ -0.28
GTF3C4-201ENST00000372146 LOC390937A0A1W2PQ73 354 aa13.27□□□□□ -0.28
GTF3C4-201ENST00000372146 OGG1O15527 345 aa13.27□□□□□ -0.28
GTF3C4-201ENST00000372146 P2RY4P51582 365 aa13.27□□□□□ -0.28
GTF3C4-201ENST00000372146 DNM1P46Q6ZS02 220 aa13.27□□□□□ -0.28
GTF3C4-201ENST00000372146 TOMM7Q9P0U1 55 aa13.27□□□□□ -0.28
GTF3C4-201ENST00000372146 TRPM7Q96QT4 1865 aa13.27□□□□□ -0.28
GTF3C4-201ENST00000372146 IGLV3-10A0A075B6K4 115 aa13.27□□□□□ -0.28
GTF3C4-201ENST00000372146 CDIPTO14735 213 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms